EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000025450 (Gene tree)
Gene ID: -
Gene Symbol: NOM1
Alias: C7orf3|PPP1R113|SGD1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 17294 bases
Position: chrLZNR01000165.1:365423-382716
Accession: 13244
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000033393	MA3	PF02847.17	1.4e-24	1	1
ENSUAMP00000033394	MA3	PF02847.17	2.4e-17	1	1
ENSUAMP00000033394	MIF4G	PF02854.19	8.6e-17	1	1
ENSUAMP00000033393	MIF4G	PF02854.19	1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000037201	NOM1-201	4292	-	ENSUAMP00000033393	870 (aa)	-	-
ENSUAMT00000037202	NOM1-202	4160	-	ENSUAMP00000033394	826 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000025450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000025450's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000025450	NOM1	100	72.260	ENSG00000146909	NOM1	96	74.347	Homo_sapiens
ENSUAMG00000025450	NOM1	61	65.672	ENSAPOG00000012073	nom1	97	51.934	Acanthochromis_polyacanthus
ENSUAMG00000025450	NOM1	82	96.095	ENSAMEG00000001412	NOM1	99	96.095	Ailuropoda_melanoleuca
ENSUAMG00000025450	NOM1	83	66.987	ENSACIG00000018050	nom1	77	67.273	Amphilophus_citrinellus
ENSUAMG00000025450	NOM1	61	65.283	ENSAOCG00000006229	nom1	98	52.179	Amphiprion_ocellaris
ENSUAMG00000025450	NOM1	61	65.660	ENSAPEG00000015994	nom1	98	51.752	Amphiprion_percula
ENSUAMG00000025450	NOM1	79	58.646	ENSATEG00000005405	nom1	81	59.124	Anabas_testudineus
ENSUAMG00000025450	NOM1	77	62.332	ENSAPLG00000006585	NOM1	99	59.710	Anas_platyrhynchos
ENSUAMG00000025450	NOM1	80	58.625	ENSACAG00000011192	NOM1	97	54.608	Anolis_carolinensis
ENSUAMG00000025450	NOM1	61	64.906	ENSACLG00000000033	nom1	65	63.504	Astatotilapia_calliptera
ENSUAMG00000025450	NOM1	60	64.381	ENSAMXG00000041486	nom1	63	63.139	Astyanax_mexicanus
ENSUAMG00000025450	NOM1	96	71.924	ENSBTAG00000016435	NOM1	96	71.174	Bos_taurus
ENSUAMG00000025450	NOM1	96	72.521	ENSCJAG00000004336	NOM1	96	73.665	Callithrix_jacchus
ENSUAMG00000025450	NOM1	63	74.765	ENSCAFG00000029845	-	100	75.330	Canis_familiaris
ENSUAMG00000025450	NOM1	100	81.435	ENSCAFG00020005121	NOM1	100	81.072	Canis_lupus_dingo
ENSUAMG00000025450	NOM1	95	69.240	ENSCHIG00000020102	NOM1	95	69.395	Capra_hircus
ENSUAMG00000025450	NOM1	95	73.621	ENSTSYG00000000227	NOM1	95	72.348	Carlito_syrichta
ENSUAMG00000025450	NOM1	60	79.732	ENSCAPG00000016273	NOM1	100	79.732	Cavia_aperea
ENSUAMG00000025450	NOM1	100	63.709	ENSCPOG00000025538	NOM1	97	64.727	Cavia_porcellus
ENSUAMG00000025450	NOM1	96	61.575	ENSCCAG00000014944	NOM1	100	87.640	Cebus_capucinus
ENSUAMG00000025450	NOM1	83	68.681	ENSCLAG00000000267	NOM1	83	68.082	Chinchilla_lanigera
ENSUAMG00000025450	NOM1	84	71.645	ENSCPBG00000018215	NOM1	85	71.645	Chrysemys_picta_bellii
ENSUAMG00000025450	NOM1	59	41.635	ENSCING00000005248	-	91	37.572	Ciona_intestinalis
ENSUAMG00000025450	NOM1	61	82.584	ENSCANG00000041984	NOM1	92	82.584	Colobus_angolensis_palliatus
ENSUAMG00000025450	NOM1	79	72.792	ENSCGRG00001020293	Nom1	97	67.409	Cricetulus_griseus_chok1gshd
ENSUAMG00000025450	NOM1	61	79.356	ENSCGRG00000005405	Nom1	100	78.987	Cricetulus_griseus_crigri
ENSUAMG00000025450	NOM1	74	57.645	ENSCSEG00000000932	nom1	77	57.337	Cynoglossus_semilaevis
ENSUAMG00000025450	NOM1	95	53.929	ENSCVAG00000007562	nom1	97	52.719	Cyprinodon_variegatus
ENSUAMG00000025450	NOM1	97	51.916	ENSDARG00000060027	nom1	99	66.944	Danio_rerio
ENSUAMG00000025450	NOM1	59	39.662	FBgn0035336	CG9004	62	39.623	Drosophila_melanogaster
ENSUAMG00000025450	NOM1	90	66.509	ENSETEG00000003104	NOM1	88	66.509	Echinops_telfairi
ENSUAMG00000025450	NOM1	96	77.033	ENSEASG00005001489	NOM1	96	78.401	Equus_asinus_asinus
ENSUAMG00000025450	NOM1	79	80.375	ENSECAG00000007596	NOM1	90	77.870	Equus_caballus
ENSUAMG00000025450	NOM1	63	64.781	ENSELUG00000006266	nom1	81	58.333	Esox_lucius
ENSUAMG00000025450	NOM1	100	72.790	ENSFCAG00000006467	NOM1	100	78.071	Felis_catus
ENSUAMG00000025450	NOM1	80	60.423	ENSFALG00000006904	NOM1	97	60.462	Ficedula_albicollis
ENSUAMG00000025450	NOM1	96	66.468	ENSFDAG00000016241	NOM1	98	65.212	Fukomys_damarensis
ENSUAMG00000025450	NOM1	60	65.835	ENSFHEG00000015974	nom1	93	53.216	Fundulus_heteroclitus
ENSUAMG00000025450	NOM1	79	55.382	ENSGMOG00000005129	nom1	89	54.993	Gadus_morhua
ENSUAMG00000025450	NOM1	98	55.852	ENSGALG00000006437	NOM1	92	55.131	Gallus_gallus
ENSUAMG00000025450	NOM1	60	64.818	ENSGAFG00000003211	nom1	81	57.536	Gambusia_affinis
ENSUAMG00000025450	NOM1	95	58.403	ENSGAGG00000014347	NOM1	97	58.000	Gopherus_agassizii
ENSUAMG00000025450	NOM1	99	71.510	ENSGGOG00000010920	NOM1	88	73.571	Gorilla_gorilla
ENSUAMG00000025450	NOM1	95	51.700	ENSHBUG00000014616	nom1	81	56.757	Haplochromis_burtoni
ENSUAMG00000025450	NOM1	96	69.042	ENSHGLG00000007392	NOM1	97	66.197	Heterocephalus_glaber_female
ENSUAMG00000025450	NOM1	84	83.861	ENSHGLG00100014407	NOM1	96	83.861	Heterocephalus_glaber_male
ENSUAMG00000025450	NOM1	62	62.292	ENSIPUG00000013980	nom1	82	57.720	Ictalurus_punctatus
ENSUAMG00000025450	NOM1	66	77.312	ENSSTOG00000031736	NOM1	99	77.954	Ictidomys_tridecemlineatus
ENSUAMG00000025450	NOM1	56	81.186	ENSJJAG00000011716	Nom1	99	81.186	Jaculus_jaculus
ENSUAMG00000025450	NOM1	62	64.037	ENSLBEG00000009252	nom1	97	50.232	Labrus_bergylta
ENSUAMG00000025450	NOM1	80	59.571	ENSLACG00000011777	NOM1	82	59.827	Latimeria_chalumnae
ENSUAMG00000025450	NOM1	95	54.994	ENSLOCG00000012452	nom1	99	53.976	Lepisosteus_oculatus
ENSUAMG00000025450	NOM1	96	65.718	ENSLAFG00000007119	NOM1	98	64.124	Loxodonta_africana
ENSUAMG00000025450	NOM1	100	70.080	ENSMMUG00000039033	NOM1	95	71.445	Macaca_mulatta
ENSUAMG00000025450	NOM1	61	83.239	ENSMLEG00000037062	NOM1	100	83.239	Mandrillus_leucophaeus
ENSUAMG00000025450	NOM1	96	52.220	ENSMAMG00000004118	nom1	98	50.528	Mastacembelus_armatus
ENSUAMG00000025450	NOM1	61	64.906	ENSMZEG00005000384	nom1	65	63.504	Maylandia_zebra
ENSUAMG00000025450	NOM1	81	61.135	ENSMGAG00000005051	NOM1	97	61.472	Meleagris_gallopavo
ENSUAMG00000025450	NOM1	96	69.048	ENSMAUG00000017988	Nom1	96	68.602	Mesocricetus_auratus
ENSUAMG00000025450	NOM1	100	72.623	ENSMICG00000017531	NOM1	96	73.747	Microcebus_murinus
ENSUAMG00000025450	NOM1	66	77.739	ENSMOCG00000015962	Nom1	96	67.529	Microtus_ochrogaster
ENSUAMG00000025450	NOM1	95	49.650	ENSMMOG00000004419	nom1	80	54.096	Mola_mola
ENSUAMG00000025450	NOM1	63	76.577	ENSMODG00000005177	NOM1	99	62.831	Monodelphis_domestica
ENSUAMG00000025450	NOM1	75	58.815	ENSMALG00000008800	nom1	80	58.696	Monopterus_albus
ENSUAMG00000025450	NOM1	97	67.217	MGP_CAROLIEiJ_G0027043	Nom1	95	65.533	Mus_caroli
ENSUAMG00000025450	NOM1	97	67.335	ENSMUSG00000001569	Nom1	95	66.746	Mus_musculus
ENSUAMG00000025450	NOM1	97	67.335	MGP_SPRETEiJ_G0028039	Nom1	95	65.885	Mus_spretus
ENSUAMG00000025450	NOM1	79	81.713	ENSMPUG00000009745	NOM1	99	81.713	Mustela_putorius_furo
ENSUAMG00000025450	NOM1	70	75.123	ENSMLUG00000009129	NOM1	91	80.510	Myotis_lucifugus
ENSUAMG00000025450	NOM1	83	55.814	ENSNBRG00000016429	nom1	94	65.392	Neolamprologus_brichardi
ENSUAMG00000025450	NOM1	96	71.124	ENSNLEG00000000238	NOM1	96	72.057	Nomascus_leucogenys
ENSUAMG00000025450	NOM1	68	65.385	ENSMEUG00000001108	NOM1	86	65.385	Notamacropus_eugenii
ENSUAMG00000025450	NOM1	85	80.702	ENSOPRG00000014676	NOM1	76	80.702	Ochotona_princeps
ENSUAMG00000025450	NOM1	81	70.448	ENSODEG00000009399	NOM1	100	70.210	Octodon_degus
ENSUAMG00000025450	NOM1	83	55.121	ENSONIG00000005958	nom1	86	56.860	Oreochromis_niloticus
ENSUAMG00000025450	NOM1	53	76.253	ENSOANG00000006139	-	97	76.253	Ornithorhynchus_anatinus
ENSUAMG00000025450	NOM1	93	56.083	ENSOCUG00000021448	-	95	66.725	Oryctolagus_cuniculus
ENSUAMG00000025450	NOM1	96	72.695	ENSOCUG00000004071	-	96	72.209	Oryctolagus_cuniculus
ENSUAMG00000025450	NOM1	94	50.296	ENSORLG00000010541	nom1	94	50.184	Oryzias_latipes
ENSUAMG00000025450	NOM1	79	56.153	ENSORLG00020010789	nom1	90	56.534	Oryzias_latipes_hni
ENSUAMG00000025450	NOM1	94	51.371	ENSORLG00015010475	nom1	90	56.250	Oryzias_latipes_hsok
ENSUAMG00000025450	NOM1	60	65.067	ENSOMEG00000004219	nom1	82	58.023	Oryzias_melastigma
ENSUAMG00000025450	NOM1	67	77.778	ENSOGAG00000001124	NOM1	96	77.474	Otolemur_garnettii
ENSUAMG00000025450	NOM1	79	73.132	ENSOARG00000007261	NOM1	95	73.538	Ovis_aries
ENSUAMG00000025450	NOM1	96	73.697	ENSPPAG00000041374	NOM1	96	74.286	Pan_paniscus
ENSUAMG00000025450	NOM1	83	81.604	ENSPTIG00000013532	NOM1	98	82.019	Panthera_tigris_altaica
ENSUAMG00000025450	NOM1	96	73.578	ENSPTRG00000019917	NOM1	96	73.990	Pan_troglodytes
ENSUAMG00000025450	NOM1	100	73.068	ENSPANG00000007605	NOM1	96	74.852	Papio_anubis
ENSUAMG00000025450	NOM1	97	51.106	ENSPKIG00000005825	nom1	82	56.734	Paramormyrops_kingsleyae
ENSUAMG00000025450	NOM1	62	71.033	ENSPSIG00000017848	NOM1	90	71.033	Pelodiscus_sinensis
ENSUAMG00000025450	NOM1	79	57.864	ENSPMGG00000002577	nom1	81	57.637	Periophthalmus_magnuspinnatus
ENSUAMG00000025450	NOM1	96	69.213	ENSPEMG00000024180	Nom1	95	68.409	Peromyscus_maniculatus_bairdii
ENSUAMG00000025450	NOM1	97	62.710	ENSPCIG00000027941	NOM1	95	64.550	Phascolarctos_cinereus
ENSUAMG00000025450	NOM1	60	65.905	ENSPFOG00000015771	nom1	85	57.241	Poecilia_formosa
ENSUAMG00000025450	NOM1	60	66.157	ENSPLAG00000007856	nom1	85	56.865	Poecilia_latipinna
ENSUAMG00000025450	NOM1	97	52.755	ENSPMEG00000014155	nom1	81	58.671	Poecilia_mexicana
ENSUAMG00000025450	NOM1	95	53.477	ENSPREG00000008850	nom1	97	52.600	Poecilia_reticulata
ENSUAMG00000025450	NOM1	96	69.643	ENSPPYG00000018222	NOM1	95	69.917	Pongo_abelii
ENSUAMG00000025450	NOM1	71	79.085	ENSPCAG00000000440	NOM1	85	77.778	Procavia_capensis
ENSUAMG00000025450	NOM1	61	82.486	ENSPCOG00000015222	NOM1	100	82.486	Propithecus_coquereli
ENSUAMG00000025450	NOM1	96	74.113	ENSPVAG00000014760	NOM1	96	73.286	Pteropus_vampyrus
ENSUAMG00000025450	NOM1	62	64.140	ENSPNYG00000006975	nom1	97	64.140	Pundamilia_nyererei
ENSUAMG00000025450	NOM1	62	63.586	ENSPNAG00000011085	nom1	78	57.245	Pygocentrus_nattereri
ENSUAMG00000025450	NOM1	96	63.290	ENSRNOG00000048969	AABR07059041.1	100	62.545	Rattus_norvegicus
ENSUAMG00000025450	NOM1	100	72.551	ENSRBIG00000037042	NOM1	95	74.286	Rhinopithecus_bieti
ENSUAMG00000025450	NOM1	100	72.323	ENSRROG00000037293	NOM1	95	73.929	Rhinopithecus_roxellana
ENSUAMG00000025450	NOM1	85	65.960	ENSSHAG00000017998	-	98	68.240	Sarcophilus_harrisii
ENSUAMG00000025450	NOM1	55	65.145	ENSSFOG00015003196	nom1	99	65.145	Scleropages_formosus
ENSUAMG00000025450	NOM1	96	51.977	ENSSMAG00000011047	nom1	81	58.381	Scophthalmus_maximus
ENSUAMG00000025450	NOM1	95	52.556	ENSSDUG00000006834	nom1	81	58.466	Seriola_dumerili
ENSUAMG00000025450	NOM1	95	52.625	ENSSLDG00000021812	nom1	81	58.746	Seriola_lalandi_dorsalis
ENSUAMG00000025450	NOM1	95	45.881	ENSSPUG00000002556	NOM1	88	72.611	Sphenodon_punctatus
ENSUAMG00000025450	NOM1	62	65.683	ENSSPAG00000000953	nom1	82	57.746	Stegastes_partitus
ENSUAMG00000025450	NOM1	84	57.810	ENSTGUG00000000702	-	97	59.195	Taeniopygia_guttata
ENSUAMG00000025450	NOM1	80	58.060	ENSTRUG00000010239	nom1	81	57.349	Takifugu_rubripes
ENSUAMG00000025450	NOM1	84	55.735	ENSTNIG00000012783	nom1	86	56.484	Tetraodon_nigroviridis
ENSUAMG00000025450	NOM1	99	71.560	ENSTTRG00000009691	NOM1	96	72.467	Tursiops_truncatus
ENSUAMG00000025450	NOM1	85	98.248	ENSUMAG00000014275	NOM1	99	98.248	Ursus_maritimus
ENSUAMG00000025450	NOM1	100	80.730	ENSVVUG00000002608	NOM1	100	81.435	Vulpes_vulpes
ENSUAMG00000025450	NOM1	97	50.698	ENSXETG00000021611	nom1	92	69.397	Xenopus_tropicalis
ENSUAMG00000025450	NOM1	95	53.118	ENSXMAG00000002451	nom1	97	51.909	Xiphophorus_maculatus