EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000025727 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 24794 bases
Position: chrLZNR01005514.1:117846-142639
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000033775	RRM_1	PF00076.22	1.1e-22	1	2
ENSUAMP00000033775	RRM_1	PF00076.22	1.1e-22	2	2
ENSUAMP00000033776	RRM_1	PF00076.22	1.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000037619	-	537	-	ENSUAMP00000033775	178 (aa)	-	-
ENSUAMT00000037620	-	483	-	ENSUAMP00000033776	160 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000025727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000025727's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000025727	-	58	34.409	ENSUAMG00000018608	-	57	34.409
ENSUAMG00000025727	-	67	34.444	ENSUAMG00000022313	ELAVL1	51	34.444
ENSUAMG00000025727	-	53	33.333	ENSUAMG00000025628	HNRNPA2B1	54	32.955
ENSUAMG00000025727	-	88	30.769	ENSUAMG00000013026	ELAVL4	76	30.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000025727	-	85	79.870	ENSG00000161082	CELF5	51	79.870	Homo_sapiens
ENSUAMG00000025727	-	98	99.429	ENSG00000140488	CELF6	97	94.574	Homo_sapiens
ENSUAMG00000025727	-	88	82.278	ENSAPOG00000019202	si:dkey-205h23.2	53	82.278	Acanthochromis_polyacanthus
ENSUAMG00000025727	-	88	82.278	ENSACIG00000003650	si:dkey-205h23.2	55	82.278	Amphilophus_citrinellus
ENSUAMG00000025727	-	88	82.278	ENSAOCG00000000908	si:dkey-205h23.2	53	82.278	Amphiprion_ocellaris
ENSUAMG00000025727	-	88	82.278	ENSAPEG00000009237	si:dkey-205h23.2	53	82.278	Amphiprion_percula
ENSUAMG00000025727	-	98	98.857	ENSANAG00000025788	-	51	98.857	Aotus_nancymaae
ENSUAMG00000025727	-	88	82.278	ENSACLG00000016215	si:dkey-205h23.2	53	82.278	Astatotilapia_calliptera
ENSUAMG00000025727	-	76	85.294	ENSBTAG00000021774	CELF5	80	85.294	Bos_taurus
ENSUAMG00000025727	-	98	99.429	ENSBTAG00000014092	CELF6	51	99.429	Bos_taurus
ENSUAMG00000025727	-	98	98.286	ENSCJAG00000018355	-	51	98.286	Callithrix_jacchus
ENSUAMG00000025727	-	100	96.875	ENSCAFG00020006479	-	100	96.875	Canis_lupus_dingo
ENSUAMG00000025727	-	85	79.870	ENSCAFG00020018264	CELF5	62	80.328	Canis_lupus_dingo
ENSUAMG00000025727	-	98	99.429	ENSCHIG00000009150	-	50	99.429	Capra_hircus
ENSUAMG00000025727	-	98	98.857	ENSCCAG00000023274	-	51	98.857	Cebus_capucinus
ENSUAMG00000025727	-	72	80.328	ENSCCAG00000028950	-	69	80.328	Cebus_capucinus
ENSUAMG00000025727	-	98	98.857	ENSCATG00000042282	-	51	98.857	Cercocebus_atys
ENSUAMG00000025727	-	54	80.220	ENSCSAG00000017935	-	84	67.213	Chlorocebus_sabaeus
ENSUAMG00000025727	-	83	69.403	ENSCPBG00000015256	-	79	72.656	Chrysemys_picta_bellii
ENSUAMG00000025727	-	79	81.690	ENSCPBG00000010903	CELF5	76	78.333	Chrysemys_picta_bellii
ENSUAMG00000025727	-	98	99.429	ENSCGRG00001012872	Celf6	50	99.429	Cricetulus_griseus_chok1gshd
ENSUAMG00000025727	-	96	98.246	ENSCGRG00000001688	Celf6	50	98.246	Cricetulus_griseus_crigri
ENSUAMG00000025727	-	88	82.278	ENSCSEG00000007749	si:dkey-205h23.2	52	82.278	Cynoglossus_semilaevis
ENSUAMG00000025727	-	72	81.818	ENSDARG00000090727	celf5b	58	81.395	Danio_rerio
ENSUAMG00000025727	-	72	83.146	ENSDNOG00000043624	CELF5	55	83.146	Dasypus_novemcinctus
ENSUAMG00000025727	-	54	57.843	ENSDNOG00000043454	-	68	57.843	Dasypus_novemcinctus
ENSUAMG00000025727	-	82	97.945	ENSDORG00000004882	Celf6	50	97.945	Dipodomys_ordii
ENSUAMG00000025727	-	59	78.571	ENSEBUG00000011155	-	59	78.571	Eptatretus_burgeri
ENSUAMG00000025727	-	63	77.228	ENSEBUG00000013374	-	85	77.228	Eptatretus_burgeri
ENSUAMG00000025727	-	98	100.000	ENSEASG00005005374	-	51	100.000	Equus_asinus_asinus
ENSUAMG00000025727	-	72	80.328	ENSEASG00005022118	-	72	80.328	Equus_asinus_asinus
ENSUAMG00000025727	-	100	99.438	ENSECAG00000035617	-	100	99.438	Equus_caballus
ENSUAMG00000025727	-	98	100.000	ENSFCAG00000016249	-	51	100.000	Felis_catus
ENSUAMG00000025727	-	54	81.319	ENSFALG00000009186	-	74	80.435	Ficedula_albicollis
ENSUAMG00000025727	-	88	82.278	ENSFHEG00000023111	-	55	82.278	Fundulus_heteroclitus
ENSUAMG00000025727	-	76	68.254	ENSGALG00000038930	-	69	68.254	Gallus_gallus
ENSUAMG00000025727	-	88	82.278	ENSGAFG00000010304	si:dkey-205h23.2	53	82.278	Gambusia_affinis
ENSUAMG00000025727	-	98	58.861	ENSGAGG00000016824	-	61	68.478	Gopherus_agassizii
ENSUAMG00000025727	-	98	99.429	ENSGGOG00000015463	-	51	99.429	Gorilla_gorilla
ENSUAMG00000025727	-	88	82.278	ENSHBUG00000001878	si:dkey-205h23.2	53	82.278	Haplochromis_burtoni
ENSUAMG00000025727	-	98	97.143	ENSHGLG00000014655	-	50	97.143	Heterocephalus_glaber_female
ENSUAMG00000025727	-	88	83.019	ENSHCOG00000021105	si:dkey-205h23.2	55	83.019	Hippocampus_comes
ENSUAMG00000025727	-	88	84.177	ENSIPUG00000010527	si:dkey-205h23.2	53	84.177	Ictalurus_punctatus
ENSUAMG00000025727	-	98	97.727	ENSJJAG00000016114	Celf6	50	97.727	Jaculus_jaculus
ENSUAMG00000025727	-	88	82.278	ENSLBEG00000011338	si:dkey-205h23.2	55	82.278	Labrus_bergylta
ENSUAMG00000025727	-	55	60.674	ENSLACG00000002119	-	92	60.227	Latimeria_chalumnae
ENSUAMG00000025727	-	54	61.111	ENSLACG00000016312	-	81	56.000	Latimeria_chalumnae
ENSUAMG00000025727	-	56	59.140	ENSLOCG00000017522	-	99	59.140	Lepisosteus_oculatus
ENSUAMG00000025727	-	98	98.857	ENSMFAG00000002682	-	51	98.857	Macaca_fascicularis
ENSUAMG00000025727	-	98	98.857	ENSMNEG00000033740	-	51	98.857	Macaca_nemestrina
ENSUAMG00000025727	-	88	82.278	ENSMAMG00000003343	-	55	82.278	Mastacembelus_armatus
ENSUAMG00000025727	-	88	82.278	ENSMZEG00005007126	si:dkey-205h23.2	53	82.278	Maylandia_zebra
ENSUAMG00000025727	-	98	99.429	ENSMAUG00000012641	Celf6	50	99.429	Mesocricetus_auratus
ENSUAMG00000025727	-	76	84.672	ENSMICG00000003506	CELF5	70	80.328	Microcebus_murinus
ENSUAMG00000025727	-	98	97.714	ENSMICG00000027918	-	51	97.714	Microcebus_murinus
ENSUAMG00000025727	-	98	97.143	ENSMOCG00000002573	Celf6	50	97.143	Microtus_ochrogaster
ENSUAMG00000025727	-	88	62.366	ENSMMOG00000016498	si:dkey-205h23.2	56	62.366	Mola_mola
ENSUAMG00000025727	-	99	97.740	MGP_CAROLIEiJ_G0032305	Celf6	97	97.740	Mus_caroli
ENSUAMG00000025727	-	76	84.672	MGP_CAROLIEiJ_G0015643	-	93	80.328	Mus_caroli
ENSUAMG00000025727	-	99	97.740	ENSMUSG00000032297	Celf6	97	97.740	Mus_musculus
ENSUAMG00000025727	-	99	97.740	MGP_PahariEiJ_G0015171	Celf6	97	97.740	Mus_pahari
ENSUAMG00000025727	-	76	84.672	MGP_PahariEiJ_G0031056	-	93	80.328	Mus_pahari
ENSUAMG00000025727	-	99	97.740	MGP_SPRETEiJ_G0033445	Celf6	97	97.740	Mus_spretus
ENSUAMG00000025727	-	98	96.571	ENSMLUG00000030643	-	50	96.571	Myotis_lucifugus
ENSUAMG00000025727	-	98	98.857	ENSNGAG00000017427	Celf6	50	98.857	Nannospalax_galili
ENSUAMG00000025727	-	72	80.328	ENSNGAG00000019694	-	74	80.328	Nannospalax_galili
ENSUAMG00000025727	-	88	82.278	ENSNBRG00000010105	si:dkey-205h23.2	55	82.278	Neolamprologus_brichardi
ENSUAMG00000025727	-	98	99.429	ENSNLEG00000013917	-	51	99.429	Nomascus_leucogenys
ENSUAMG00000025727	-	76	82.353	ENSONIG00000004856	celf5a	69	72.826	Oreochromis_niloticus
ENSUAMG00000025727	-	72	80.328	ENSOANG00000009501	-	84	80.328	Ornithorhynchus_anatinus
ENSUAMG00000025727	-	88	82.278	ENSORLG00000013392	si:dkey-205h23.2	55	82.278	Oryzias_latipes
ENSUAMG00000025727	-	88	82.278	ENSORLG00020021262	si:dkey-205h23.2	55	82.278	Oryzias_latipes_hni
ENSUAMG00000025727	-	88	82.278	ENSORLG00015019715	si:dkey-205h23.2	55	82.278	Oryzias_latipes_hsok
ENSUAMG00000025727	-	88	82.278	ENSOMEG00000015364	si:dkey-205h23.2	55	82.278	Oryzias_melastigma
ENSUAMG00000025727	-	98	99.429	ENSOGAG00000031801	-	51	99.429	Otolemur_garnettii
ENSUAMG00000025727	-	98	99.429	ENSPPAG00000042321	-	51	99.429	Pan_paniscus
ENSUAMG00000025727	-	98	100.000	ENSPPRG00000021783	-	51	100.000	Panthera_pardus
ENSUAMG00000025727	-	94	100.000	ENSPTIG00000005511	-	100	100.000	Panthera_tigris_altaica
ENSUAMG00000025727	-	98	99.429	ENSPTRG00000034360	-	51	99.429	Pan_troglodytes
ENSUAMG00000025727	-	98	98.857	ENSPANG00000016205	-	51	98.857	Papio_anubis
ENSUAMG00000025727	-	88	82.911	ENSPKIG00000004198	si:dkey-205h23.2	50	75.287	Paramormyrops_kingsleyae
ENSUAMG00000025727	-	88	81.013	ENSPKIG00000019554	-	53	81.013	Paramormyrops_kingsleyae
ENSUAMG00000025727	-	70	66.102	ENSPKIG00000024672	-	65	66.102	Paramormyrops_kingsleyae
ENSUAMG00000025727	-	54	74.725	ENSPSIG00000015573	-	74	73.118	Pelodiscus_sinensis
ENSUAMG00000025727	-	52	84.783	ENSPSIG00000007119	-	85	84.783	Pelodiscus_sinensis
ENSUAMG00000025727	-	98	98.857	ENSPEMG00000013842	Celf6	50	99.422	Peromyscus_maniculatus_bairdii
ENSUAMG00000025727	-	98	75.248	ENSPCIG00000016305	-	52	75.248	Phascolarctos_cinereus
ENSUAMG00000025727	-	55	58.065	ENSPFOG00000024694	-	95	58.065	Poecilia_formosa
ENSUAMG00000025727	-	72	78.689	ENSPLAG00000013501	celf5a	76	78.689	Poecilia_latipinna
ENSUAMG00000025727	-	72	78.689	ENSPMEG00000011632	-	79	78.689	Poecilia_mexicana
ENSUAMG00000025727	-	98	98.857	ENSPCOG00000018535	-	51	98.857	Propithecus_coquereli
ENSUAMG00000025727	-	88	82.278	ENSPNYG00000011474	si:dkey-205h23.2	53	82.278	Pundamilia_nyererei
ENSUAMG00000025727	-	88	82.278	ENSPNAG00000029884	si:dkey-205h23.2	55	82.278	Pygocentrus_nattereri
ENSUAMG00000025727	-	54	80.220	ENSRNOG00000049802	AABR07031533.1	56	80.220	Rattus_norvegicus
ENSUAMG00000025727	-	98	99.429	ENSRNOG00000052224	Celf6	50	99.429	Rattus_norvegicus
ENSUAMG00000025727	-	98	98.857	ENSRROG00000038113	-	51	98.857	Rhinopithecus_roxellana
ENSUAMG00000025727	-	72	80.328	ENSSBOG00000036241	-	76	80.328	Saimiri_boliviensis_boliviensis
ENSUAMG00000025727	-	54	85.714	ENSSHAG00000008992	-	98	83.871	Sarcophilus_harrisii
ENSUAMG00000025727	-	88	82.911	ENSSMAG00000008575	-	54	82.911	Scophthalmus_maximus
ENSUAMG00000025727	-	88	82.278	ENSSDUG00000005607	si:dkey-205h23.2	53	82.278	Seriola_dumerili
ENSUAMG00000025727	-	76	70.492	ENSSPAG00000007933	-	92	70.492	Stegastes_partitus
ENSUAMG00000025727	-	98	100.000	ENSSSCG00000001928	-	50	100.000	Sus_scrofa
ENSUAMG00000025727	-	54	81.319	ENSTGUG00000001647	-	75	80.435	Taeniopygia_guttata
ENSUAMG00000025727	-	88	82.278	ENSTRUG00000012391	si:dkey-205h23.2	53	82.278	Takifugu_rubripes
ENSUAMG00000025727	-	100	98.876	ENSVVUG00000018268	-	100	98.876	Vulpes_vulpes
ENSUAMG00000025727	-	72	80.328	ENSVVUG00000003242	-	62	80.328	Vulpes_vulpes
ENSUAMG00000025727	-	88	82.278	ENSXMAG00000018769	si:dkey-205h23.2	55	82.278	Xiphophorus_maculatus