EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000025729 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 5070 bases
Position: chrLZNR01005514.1:143470-148539
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000033778	RRM_1	PF00076.22	3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000037622	-	3079	-	ENSUAMP00000033778	122 (aa)	-	UPI0003D155FB

Gene Model

Click here to download ENSUAMG00000025729's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000025729's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000025729	-	68	40.741	ENSUAMG00000018679	ELAVL2	62	40.741
ENSUAMG00000025729	-	51	37.097	ENSUAMG00000002157	-	78	37.097
ENSUAMG00000025729	-	77	44.444	ENSUAMG00000022313	ELAVL1	70	44.444
ENSUAMG00000025729	-	51	35.484	ENSUAMG00000001240	-	86	35.484
ENSUAMG00000025729	-	68	40.741	ENSUAMG00000013026	ELAVL4	64	40.741
ENSUAMG00000025729	-	78	42.308	ENSUAMG00000000405	ELAVL3	71	41.975

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000025729	-	75	89.130	ENSAMXG00000034719	-	77	89.474	Astyanax_mexicanus
ENSUAMG00000025729	-	74	86.667	ENSBTAG00000051439	-	57	86.667	Bos_taurus
ENSUAMG00000025729	-	100	98.361	ENSCHIG00000009150	-	100	98.361	Capra_hircus
ENSUAMG00000025729	-	89	88.889	ENSCVAG00000018670	si:dkey-205h23.2	54	87.705	Cyprinodon_variegatus
ENSUAMG00000025729	-	96	99.145	ENSECAG00000036983	-	89	99.145	Equus_caballus
ENSUAMG00000025729	-	74	92.222	ENSGALG00000048972	-	83	92.222	Gallus_gallus
ENSUAMG00000025729	-	66	62.500	ENSNBRG00000010123	-	75	62.500	Neolamprologus_brichardi
ENSUAMG00000025729	-	57	86.957	ENSOANG00000031583	-	100	86.957	Ornithorhynchus_anatinus
ENSUAMG00000025729	-	99	99.174	ENSPTIG00000005413	-	92	99.174	Panthera_tigris_altaica
ENSUAMG00000025729	-	75	89.130	ENSPKIG00000024667	-	77	89.474	Paramormyrops_kingsleyae
ENSUAMG00000025729	-	75	89.130	ENSPLAG00000013524	-	77	89.474	Poecilia_latipinna
ENSUAMG00000025729	-	97	82.203	ENSPLAG00000000224	-	89	84.259	Poecilia_latipinna
ENSUAMG00000025729	-	97	82.203	ENSPLAG00000015969	-	89	84.259	Poecilia_latipinna
ENSUAMG00000025729	-	75	89.130	ENSPMEG00000011603	-	77	89.474	Poecilia_mexicana
ENSUAMG00000025729	-	100	100.000	ENSUMAG00000008820	-	100	100.000	Ursus_maritimus
ENSUAMG00000025729	-	73	86.517	ENSVVUG00000003252	-	83	81.250	Vulpes_vulpes
ENSUAMG00000025729	-	96	100.000	ENSVVUG00000018262	-	90	100.000	Vulpes_vulpes