EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000025939 (Gene tree)
Gene ID: -
Gene Symbol: TDP2
Alias: TTRAP
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 13197 bases
Position: chrLZNR01005542.1:40117-53313
Accession: 17768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000034048	Exo_endo_phos	PF03372.23	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000037924	TDP2-201	1044	-	ENSUAMP00000034048	347 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000025939's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000025939's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000025939	TDP2	95	80.352	ENSG00000111802	TDP2	99	82.392	Homo_sapiens
ENSUAMG00000025939	TDP2	73	53.488	ENSAPOG00000018379	-	90	53.488	Acanthochromis_polyacanthus
ENSUAMG00000025939	TDP2	80	99.283	ENSAMEG00000010230	TDP2	99	99.283	Ailuropoda_melanoleuca
ENSUAMG00000025939	TDP2	53	53.261	ENSAOCG00000010081	-	81	53.261	Amphiprion_ocellaris
ENSUAMG00000025939	TDP2	83	49.658	ENSAPEG00000004208	-	99	49.658	Amphiprion_percula
ENSUAMG00000025939	TDP2	78	47.810	ENSATEG00000010663	-	89	47.810	Anabas_testudineus
ENSUAMG00000025939	TDP2	93	62.462	ENSACAG00000002332	TDP2	96	61.017	Anolis_carolinensis
ENSUAMG00000025939	TDP2	96	80.175	ENSANAG00000020033	TDP2	100	78.453	Aotus_nancymaae
ENSUAMG00000025939	TDP2	77	55.556	ENSACLG00000016148	tdp2b	95	55.556	Astatotilapia_calliptera
ENSUAMG00000025939	TDP2	79	48.188	ENSACLG00000016132	tdp2b	93	48.188	Astatotilapia_calliptera
ENSUAMG00000025939	TDP2	79	47.826	ENSACLG00000016174	tdp2b	93	47.826	Astatotilapia_calliptera
ENSUAMG00000025939	TDP2	95	47.480	ENSAMXG00000011775	tdp2b	98	47.480	Astyanax_mexicanus
ENSUAMG00000025939	TDP2	78	48.905	ENSAMXG00000036549	tdp2a	89	48.905	Astyanax_mexicanus
ENSUAMG00000025939	TDP2	95	81.159	ENSBTAG00000000365	TDP2	97	81.127	Bos_taurus
ENSUAMG00000025939	TDP2	90	32.188	WBGene00013405	tdpt-1	85	32.390	Caenorhabditis_elegans
ENSUAMG00000025939	TDP2	98	79.487	ENSCJAG00000021963	-	97	79.487	Callithrix_jacchus
ENSUAMG00000025939	TDP2	98	80.342	ENSCJAG00000006074	TDP2	92	87.097	Callithrix_jacchus
ENSUAMG00000025939	TDP2	100	85.000	ENSCAFG00000010428	TDP2	96	95.341	Canis_familiaris
ENSUAMG00000025939	TDP2	80	95.341	ENSCAFG00020009994	TDP2	96	95.341	Canis_lupus_dingo
ENSUAMG00000025939	TDP2	80	87.544	ENSCHIG00000015294	-	95	87.544	Capra_hircus
ENSUAMG00000025939	TDP2	82	83.681	ENSTSYG00000037199	TDP2	93	83.681	Carlito_syrichta
ENSUAMG00000025939	TDP2	95	81.765	ENSCPOG00000006390	TDP2	100	79.888	Cavia_porcellus
ENSUAMG00000025939	TDP2	98	80.342	ENSCCAG00000022734	TDP2	92	87.097	Cebus_capucinus
ENSUAMG00000025939	TDP2	95	80.938	ENSCATG00000022076	TDP2	99	82.060	Cercocebus_atys
ENSUAMG00000025939	TDP2	100	79.609	ENSCLAG00000002072	TDP2	100	79.609	Chinchilla_lanigera
ENSUAMG00000025939	TDP2	97	80.925	ENSCSAG00000007769	TDP2	97	80.925	Chlorocebus_sabaeus
ENSUAMG00000025939	TDP2	96	64.140	ENSCPBG00000006551	TDP2	91	63.585	Chrysemys_picta_bellii
ENSUAMG00000025939	TDP2	95	80.352	ENSCANG00000040122	TDP2	97	83.390	Colobus_angolensis_palliatus
ENSUAMG00000025939	TDP2	95	67.449	ENSCGRG00001000384	Tdp2	95	65.915	Cricetulus_griseus_chok1gshd
ENSUAMG00000025939	TDP2	95	68.788	ENSCGRG00000010250	Tdp2	99	67.806	Cricetulus_griseus_crigri
ENSUAMG00000025939	TDP2	94	51.594	ENSCVAG00000003114	tdp2b	96	51.744	Cyprinodon_variegatus
ENSUAMG00000025939	TDP2	93	49.025	ENSDARG00000035954	tdp2b	94	49.025	Danio_rerio
ENSUAMG00000025939	TDP2	71	48.163	ENSDARG00000069941	tdp2a	55	48.163	Danio_rerio
ENSUAMG00000025939	TDP2	98	77.904	ENSDNOG00000044082	TDP2	96	77.904	Dasypus_novemcinctus
ENSUAMG00000025939	TDP2	80	82.374	ENSETEG00000019096	TDP2	100	82.374	Echinops_telfairi
ENSUAMG00000025939	TDP2	73	52.549	ENSEBUG00000006535	tdp2a	59	52.549	Eptatretus_burgeri
ENSUAMG00000025939	TDP2	95	81.232	ENSEASG00005007656	TDP2	97	81.481	Equus_asinus_asinus
ENSUAMG00000025939	TDP2	95	81.232	ENSECAG00000014264	TDP2	97	81.481	Equus_caballus
ENSUAMG00000025939	TDP2	95	77.419	ENSEEUG00000010776	TDP2	97	77.208	Erinaceus_europaeus
ENSUAMG00000025939	TDP2	80	43.816	ENSELUG00000009321	tdp2a	84	45.756	Esox_lucius
ENSUAMG00000025939	TDP2	92	50.696	ENSELUG00000016449	tdp2b	94	50.696	Esox_lucius
ENSUAMG00000025939	TDP2	98	86.932	ENSFCAG00000025612	TDP2	97	86.932	Felis_catus
ENSUAMG00000025939	TDP2	97	54.310	ENSFALG00000004710	TDP2	97	54.830	Ficedula_albicollis
ENSUAMG00000025939	TDP2	84	82.818	ENSFDAG00000006512	TDP2	99	82.818	Fukomys_damarensis
ENSUAMG00000025939	TDP2	71	51.613	ENSFHEG00000013560	-	84	51.613	Fundulus_heteroclitus
ENSUAMG00000025939	TDP2	95	60.234	ENSGALG00000013637	TDP2	97	59.167	Gallus_gallus
ENSUAMG00000025939	TDP2	99	64.045	ENSGAGG00000002853	TDP2	91	64.045	Gopherus_agassizii
ENSUAMG00000025939	TDP2	95	80.645	ENSGGOG00000014237	TDP2	99	82.392	Gorilla_gorilla
ENSUAMG00000025939	TDP2	94	52.478	ENSHBUG00000002714	tdp2b	95	52.478	Haplochromis_burtoni
ENSUAMG00000025939	TDP2	60	58.654	ENSHBUG00000005421	-	86	58.654	Haplochromis_burtoni
ENSUAMG00000025939	TDP2	98	78.754	ENSHGLG00000008655	TDP2	98	78.754	Heterocephalus_glaber_female
ENSUAMG00000025939	TDP2	98	78.754	ENSHGLG00100019087	TDP2	98	78.754	Heterocephalus_glaber_male
ENSUAMG00000025939	TDP2	97	49.596	ENSIPUG00000013691	tdp2b	97	49.596	Ictalurus_punctatus
ENSUAMG00000025939	TDP2	97	62.571	ENSJJAG00000021685	Tdp2	99	62.571	Jaculus_jaculus
ENSUAMG00000025939	TDP2	81	48.070	ENSKMAG00000015485	-	90	48.070	Kryptolebias_marmoratus
ENSUAMG00000025939	TDP2	93	58.551	ENSLACG00000008852	TDP2	93	58.551	Latimeria_chalumnae
ENSUAMG00000025939	TDP2	80	58.333	ENSLOCG00000005817	tdp2b	98	58.333	Lepisosteus_oculatus
ENSUAMG00000025939	TDP2	95	78.886	ENSLAFG00000002567	TDP2	99	78.348	Loxodonta_africana
ENSUAMG00000025939	TDP2	95	81.232	ENSMFAG00000045296	TDP2	100	79.888	Macaca_fascicularis
ENSUAMG00000025939	TDP2	95	81.232	ENSMMUG00000009803	TDP2	100	79.888	Macaca_mulatta
ENSUAMG00000025939	TDP2	95	81.232	ENSMNEG00000038003	TDP2	100	79.888	Macaca_nemestrina
ENSUAMG00000025939	TDP2	95	80.645	ENSMLEG00000028883	TDP2	99	82.392	Mandrillus_leucophaeus
ENSUAMG00000025939	TDP2	97	51.268	ENSMAMG00000013654	tdp2b	98	51.268	Mastacembelus_armatus
ENSUAMG00000025939	TDP2	76	48.864	ENSMZEG00005004103	tdp2b	88	48.864	Maylandia_zebra
ENSUAMG00000025939	TDP2	71	52.632	ENSMZEG00005004055	tdp2b	82	52.632	Maylandia_zebra
ENSUAMG00000025939	TDP2	94	51.895	ENSMZEG00005003950	tdp2b	95	51.895	Maylandia_zebra
ENSUAMG00000025939	TDP2	71	46.371	ENSMZEG00005003980	-	80	46.371	Maylandia_zebra
ENSUAMG00000025939	TDP2	76	56.015	ENSMZEG00005004077	tdp2b	90	56.015	Maylandia_zebra
ENSUAMG00000025939	TDP2	80	49.286	ENSMZEG00005004126	tdp2b	91	49.286	Maylandia_zebra
ENSUAMG00000025939	TDP2	76	54.545	ENSMZEG00005004153	tdp2b	93	54.545	Maylandia_zebra
ENSUAMG00000025939	TDP2	95	62.353	ENSMGAG00000008014	TDP2	96	60.894	Meleagris_gallopavo
ENSUAMG00000025939	TDP2	95	67.155	ENSMAUG00000014451	Tdp2	92	67.155	Mesocricetus_auratus
ENSUAMG00000025939	TDP2	97	81.503	ENSMICG00000000039	TDP2	94	88.129	Microcebus_murinus
ENSUAMG00000025939	TDP2	95	68.035	ENSMOCG00000002823	Tdp2	95	66.479	Microtus_ochrogaster
ENSUAMG00000025939	TDP2	87	60.923	ENSMODG00000011653	TDP2	99	61.538	Monodelphis_domestica
ENSUAMG00000025939	TDP2	70	52.846	ENSMALG00000005368	-	83	52.846	Monopterus_albus
ENSUAMG00000025939	TDP2	96	66.570	MGP_CAROLIEiJ_G0018354	Tdp2	94	66.097	Mus_caroli
ENSUAMG00000025939	TDP2	95	67.449	ENSMUSG00000035958	Tdp2	94	66.952	Mus_musculus
ENSUAMG00000025939	TDP2	96	64.826	MGP_PahariEiJ_G0019417	Tdp2	92	64.826	Mus_pahari
ENSUAMG00000025939	TDP2	98	66.667	MGP_SPRETEiJ_G0019220	Tdp2	93	66.667	Mus_spretus
ENSUAMG00000025939	TDP2	100	86.981	ENSMPUG00000004516	TDP2	100	86.981	Mustela_putorius_furo
ENSUAMG00000025939	TDP2	100	72.145	ENSMLUG00000013506	TDP2	99	72.702	Myotis_lucifugus
ENSUAMG00000025939	TDP2	99	60.714	ENSNGAG00000001375	Tdp2	98	60.714	Nannospalax_galili
ENSUAMG00000025939	TDP2	100	79.050	ENSNLEG00000002447	TDP2	100	79.050	Nomascus_leucogenys
ENSUAMG00000025939	TDP2	97	78.098	ENSOPRG00000016299	TDP2	99	78.098	Ochotona_princeps
ENSUAMG00000025939	TDP2	80	87.455	ENSODEG00000014018	TDP2	95	87.455	Octodon_degus
ENSUAMG00000025939	TDP2	97	79.480	ENSOCUG00000013773	TDP2	96	79.480	Oryctolagus_cuniculus
ENSUAMG00000025939	TDP2	75	46.970	ENSORLG00000001661	-	96	46.970	Oryzias_latipes
ENSUAMG00000025939	TDP2	75	46.970	ENSORLG00020004634	-	96	46.970	Oryzias_latipes_hni
ENSUAMG00000025939	TDP2	76	42.697	ENSORLG00015008190	-	97	42.697	Oryzias_latipes_hsok
ENSUAMG00000025939	TDP2	80	47.653	ENSOMEG00000015899	-	92	49.194	Oryzias_melastigma
ENSUAMG00000025939	TDP2	96	78.488	ENSOGAG00000025303	TDP2	94	78.488	Otolemur_garnettii
ENSUAMG00000025939	TDP2	95	80.645	ENSPPAG00000029023	TDP2	97	84.247	Pan_paniscus
ENSUAMG00000025939	TDP2	98	86.364	ENSPPRG00000015398	TDP2	97	86.364	Panthera_pardus
ENSUAMG00000025939	TDP2	81	93.617	ENSPTIG00000018574	TDP2	96	93.617	Panthera_tigris_altaica
ENSUAMG00000025939	TDP2	95	80.645	ENSPTRG00000017778	TDP2	99	82.392	Pan_troglodytes
ENSUAMG00000025939	TDP2	95	80.059	ENSPANG00000017590	TDP2	99	81.063	Papio_anubis
ENSUAMG00000025939	TDP2	92	51.312	ENSPKIG00000006483	tdp2b	93	51.312	Paramormyrops_kingsleyae
ENSUAMG00000025939	TDP2	80	71.685	ENSPSIG00000004948	TDP2	96	71.685	Pelodiscus_sinensis
ENSUAMG00000025939	TDP2	95	67.742	ENSPEMG00000001788	Tdp2	95	66.479	Peromyscus_maniculatus_bairdii
ENSUAMG00000025939	TDP2	72	46.816	ENSPMAG00000001570	tdp2b	97	46.816	Petromyzon_marinus
ENSUAMG00000025939	TDP2	95	64.327	ENSPCIG00000007316	TDP2	92	63.352	Phascolarctos_cinereus
ENSUAMG00000025939	TDP2	71	48.400	ENSPFOG00000017990	-	90	48.400	Poecilia_formosa
ENSUAMG00000025939	TDP2	71	48.000	ENSPLAG00000019439	-	79	48.000	Poecilia_latipinna
ENSUAMG00000025939	TDP2	71	48.800	ENSPMEG00000010824	-	84	48.800	Poecilia_mexicana
ENSUAMG00000025939	TDP2	95	80.938	ENSPPYG00000016282	TDP2	90	80.627	Pongo_abelii
ENSUAMG00000025939	TDP2	95	82.353	ENSPCOG00000021415	TDP2	98	88.849	Propithecus_coquereli
ENSUAMG00000025939	TDP2	51	51.124	ENSPNYG00000001944	-	72	51.429	Pundamilia_nyererei
ENSUAMG00000025939	TDP2	81	48.161	ENSPNYG00000011504	tdp2b	97	48.161	Pundamilia_nyererei
ENSUAMG00000025939	TDP2	94	51.312	ENSPNYG00000011532	tdp2b	95	51.312	Pundamilia_nyererei
ENSUAMG00000025939	TDP2	80	47.423	ENSPNAG00000022162	tdp2a	74	47.423	Pygocentrus_nattereri
ENSUAMG00000025939	TDP2	95	65.497	ENSRNOG00000018246	Tdp2	93	65.407	Rattus_norvegicus
ENSUAMG00000025939	TDP2	95	80.352	ENSRBIG00000037119	TDP2	100	79.050	Rhinopithecus_bieti
ENSUAMG00000025939	TDP2	95	80.059	ENSRROG00000005025	TDP2	92	86.380	Rhinopithecus_roxellana
ENSUAMG00000025939	TDP2	98	81.870	ENSSBOG00000028734	TDP2	91	88.849	Saimiri_boliviensis_boliviensis
ENSUAMG00000025939	TDP2	99	62.849	ENSSHAG00000002506	TDP2	95	62.849	Sarcophilus_harrisii
ENSUAMG00000025939	TDP2	73	51.575	ENSSFOG00015011322	-	71	51.575	Scleropages_formosus
ENSUAMG00000025939	TDP2	80	79.928	ENSSARG00000013547	TDP2	100	79.928	Sorex_araneus
ENSUAMG00000025939	TDP2	95	61.714	ENSSPUG00000008288	TDP2	100	59.946	Sphenodon_punctatus
ENSUAMG00000025939	TDP2	95	82.111	ENSSSCG00000001092	TDP2	97	81.766	Sus_scrofa
ENSUAMG00000025939	TDP2	74	65.625	ENSTGUG00000009035	TDP2	98	65.625	Taeniopygia_guttata
ENSUAMG00000025939	TDP2	93	50.882	ENSTRUG00000014347	tdp2b	94	50.882	Takifugu_rubripes
ENSUAMG00000025939	TDP2	77	49.640	ENSTRUG00000012218	-	96	49.640	Takifugu_rubripes
ENSUAMG00000025939	TDP2	73	52.344	ENSTNIG00000010260	TDP2	97	52.344	Tetraodon_nigroviridis
ENSUAMG00000025939	TDP2	95	50.286	ENSTNIG00000017792	tdp2b	96	50.286	Tetraodon_nigroviridis
ENSUAMG00000025939	TDP2	95	81.633	ENSTTRG00000016376	TDP2	97	81.586	Tursiops_truncatus
ENSUAMG00000025939	TDP2	80	100.000	ENSUMAG00000020111	TDP2	93	100.000	Ursus_maritimus
ENSUAMG00000025939	TDP2	97	58.449	ENSXETG00000014826	tdp2	97	58.449	Xenopus_tropicalis
ENSUAMG00000025939	TDP2	71	49.004	ENSXCOG00000010778	-	69	49.004	Xiphophorus_couchianus
ENSUAMG00000025939	TDP2	71	49.004	ENSXMAG00000022252	-	72	49.004	Xiphophorus_maculatus