EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000026124 (Gene tree)
Gene ID: -
Gene Symbol: VARS2
Alias: DKFZP434L1435|G7a|KIAA1885|VARS2L|VARSL
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 18551 bases
Position: chrLZNR01000958.1:60821-79371
Accession: 21642
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000034442	tRNA-synt_1g	PF09334.11	3.8e-14	1	1
ENSUAMP00000034393	tRNA-synt_1g	PF09334.11	5.4e-14	1	1
ENSUAMP00000034475	tRNA-synt_1g	PF09334.11	5.5e-14	1	1
ENSUAMP00000034377	tRNA-synt_1g	PF09334.11	6e-14	1	1
ENSUAMP00000034449	tRNA-synt_1g	PF09334.11	6.5e-14	1	1
ENSUAMP00000034491	tRNA-synt_1g	PF09334.11	7.6e-14	1	1
ENSUAMP00000034478	tRNA-synt_1g	PF09334.11	1e-13	1	1
ENSUAMP00000034525	tRNA-synt_1g	PF09334.11	1.3e-11	1	1
ENSUAMP00000034442	Anticodon_1	PF08264.13	6.3e-31	1	1
ENSUAMP00000034449	Anticodon_1	PF08264.13	1e-30	1	1
ENSUAMP00000034491	Anticodon_1	PF08264.13	1.1e-30	1	1
ENSUAMP00000034478	Anticodon_1	PF08264.13	1.1e-30	1	1
ENSUAMP00000034525	Anticodon_1	PF08264.13	1.4e-30	1	1
ENSUAMP00000034475	Anticodon_1	PF08264.13	1.5e-30	1	1
ENSUAMP00000034377	Anticodon_1	PF08264.13	3.8e-30	1	1
ENSUAMP00000034393	Anticodon_1	PF08264.13	1.7e-22	1	1
ENSUAMP00000034393	tRNA-synt_1	PF00133.22	1.8e-183	1	1
ENSUAMP00000034449	tRNA-synt_1	PF00133.22	9e-183	1	1
ENSUAMP00000034478	tRNA-synt_1	PF00133.22	1.6e-181	1	1
ENSUAMP00000034377	tRNA-synt_1	PF00133.22	1.2e-179	1	1
ENSUAMP00000034442	tRNA-synt_1	PF00133.22	1.2e-177	1	1
ENSUAMP00000034491	tRNA-synt_1	PF00133.22	1.3e-176	1	2
ENSUAMP00000034491	tRNA-synt_1	PF00133.22	1.3e-176	2	2
ENSUAMP00000034475	tRNA-synt_1	PF00133.22	3.3e-170	1	1
ENSUAMP00000034525	tRNA-synt_1	PF00133.22	1e-158	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000038406	VARS2-207	3174	-	ENSUAMP00000034491	1057 (aa)	-	-
ENSUAMT00000038300	VARS2-202	3057	-	ENSUAMP00000034393	1018 (aa)	-	-
ENSUAMT00000038444	VARS2-208	2979	-	ENSUAMP00000034525	992 (aa)	-	-
ENSUAMT00000038392	VARS2-206	3282	-	ENSUAMP00000034478	1093 (aa)	-	-
ENSUAMT00000038357	VARS2-204	3192	-	ENSUAMP00000034449	1063 (aa)	-	-
ENSUAMT00000038389	VARS2-205	3153	-	ENSUAMP00000034475	1050 (aa)	-	-
ENSUAMT00000038283	VARS2-201	3057	-	ENSUAMP00000034377	1018 (aa)	-	-
ENSUAMT00000038349	VARS2-203	4620	-	ENSUAMP00000034442	922 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000026124's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000026124's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000026124	VARS2	99	50.054	ENSUAMG00000010424	VARS	81	48.991

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000026124	VARS2	99	51.958	ENSAPOG00000007396	vars2	97	50.472	Acanthochromis_polyacanthus
ENSUAMG00000026124	VARS2	100	96.312	ENSAMEG00000012997	VARS2	97	95.390	Ailuropoda_melanoleuca
ENSUAMG00000026124	VARS2	99	53.312	ENSACIG00000004344	vars2	99	51.410	Amphilophus_citrinellus
ENSUAMG00000026124	VARS2	99	51.637	ENSAOCG00000000476	vars2	97	50.188	Amphiprion_ocellaris
ENSUAMG00000026124	VARS2	99	51.742	ENSAPEG00000008646	vars2	95	50.282	Amphiprion_percula
ENSUAMG00000026124	VARS2	99	52.834	ENSATEG00000012291	vars2	97	51.388	Anabas_testudineus
ENSUAMG00000026124	VARS2	99	59.465	ENSACAG00000022093	VARS2	98	57.968	Anolis_carolinensis
ENSUAMG00000026124	VARS2	100	87.202	ENSANAG00000038018	VARS2	99	86.077	Aotus_nancymaae
ENSUAMG00000026124	VARS2	99	52.910	ENSACLG00000018673	vars2	99	51.022	Astatotilapia_calliptera
ENSUAMG00000026124	VARS2	99	54.162	ENSAMXG00000017773	vars2	97	52.726	Astyanax_mexicanus
ENSUAMG00000026124	VARS2	99	89.168	ENSBTAG00000010698	VARS2	99	87.465	Bos_taurus
ENSUAMG00000026124	VARS2	100	87.202	ENSCJAG00000019826	VARS2	99	85.795	Callithrix_jacchus
ENSUAMG00000026124	VARS2	100	90.998	ENSCAFG00000000454	VARS2	100	88.899	Canis_familiaris
ENSUAMG00000026124	VARS2	92	87.412	ENSCAFG00020019387	VARS2	96	90.234	Canis_lupus_dingo
ENSUAMG00000026124	VARS2	99	88.950	ENSCHIG00000007847	VARS2	99	87.276	Capra_hircus
ENSUAMG00000026124	VARS2	99	86.848	ENSTSYG00000009904	VARS2	99	85.297	Carlito_syrichta
ENSUAMG00000026124	VARS2	99	83.913	ENSCAPG00000017770	VARS2	99	83.913	Cavia_aperea
ENSUAMG00000026124	VARS2	99	83.804	ENSCPOG00000021834	VARS2	99	82.425	Cavia_porcellus
ENSUAMG00000026124	VARS2	100	87.419	ENSCCAG00000037907	VARS2	99	86.265	Cebus_capucinus
ENSUAMG00000026124	VARS2	99	88.261	ENSCATG00000032554	VARS2	99	86.805	Cercocebus_atys
ENSUAMG00000026124	VARS2	99	84.908	ENSCLAG00000002889	VARS2	99	83.067	Chinchilla_lanigera
ENSUAMG00000026124	VARS2	99	88.261	ENSCSAG00000008327	VARS2	99	86.711	Chlorocebus_sabaeus
ENSUAMG00000026124	VARS2	97	63.344	ENSCPBG00000021502	VARS2	94	68.944	Chrysemys_picta_bellii
ENSUAMG00000026124	VARS2	99	88.261	ENSCANG00000014991	VARS2	99	86.711	Colobus_angolensis_palliatus
ENSUAMG00000026124	VARS2	100	83.297	ENSCGRG00001021535	Vars2	100	81.562	Cricetulus_griseus_chok1gshd
ENSUAMG00000026124	VARS2	100	83.297	ENSCGRG00000014112	Vars2	100	81.562	Cricetulus_griseus_crigri
ENSUAMG00000026124	VARS2	87	62.805	ENSCSEG00000015432	vars2	96	58.124	Cynoglossus_semilaevis
ENSUAMG00000026124	VARS2	74	52.684	ENSCVAG00000017765	vars2	98	52.684	Cyprinodon_variegatus
ENSUAMG00000026124	VARS2	99	54.153	ENSDARG00000056717	vars2	97	52.170	Danio_rerio
ENSUAMG00000026124	VARS2	91	86.326	ENSDORG00000008516	Vars2	93	86.326	Dipodomys_ordii
ENSUAMG00000026124	VARS2	99	76.087	ENSETEG00000014844	VARS2	99	75.024	Echinops_telfairi
ENSUAMG00000026124	VARS2	99	89.554	ENSEASG00005019997	VARS2	97	88.396	Equus_asinus_asinus
ENSUAMG00000026124	VARS2	99	90.642	ENSECAG00000018202	VARS2	99	89.340	Equus_caballus
ENSUAMG00000026124	VARS2	72	85.437	ENSEEUG00000012591	-	68	85.437	Erinaceus_europaeus
ENSUAMG00000026124	VARS2	99	52.892	ENSELUG00000017824	vars2	97	51.362	Esox_lucius
ENSUAMG00000026124	VARS2	100	91.540	ENSFCAG00000010531	VARS2	100	90.216	Felis_catus
ENSUAMG00000026124	VARS2	99	84.188	ENSFDAG00000017216	VARS2	99	82.247	Fukomys_damarensis
ENSUAMG00000026124	VARS2	92	52.154	ENSFHEG00000013932	vars2	95	49.897	Fundulus_heteroclitus
ENSUAMG00000026124	VARS2	95	56.384	ENSGMOG00000018960	vars2	98	55.626	Gadus_morhua
ENSUAMG00000026124	VARS2	83	50.504	ENSGAFG00000004737	vars2	88	50.440	Gambusia_affinis
ENSUAMG00000026124	VARS2	99	54.615	ENSGACG00000001464	vars2	99	53.597	Gasterosteus_aculeatus
ENSUAMG00000026124	VARS2	98	62.826	ENSGAGG00000011652	VARS2	98	62.719	Gopherus_agassizii
ENSUAMG00000026124	VARS2	99	88.043	ENSGGOG00000014587	VARS2	99	86.428	Gorilla_gorilla
ENSUAMG00000026124	VARS2	99	51.856	ENSHBUG00000002448	vars2	100	49.208	Haplochromis_burtoni
ENSUAMG00000026124	VARS2	99	84.039	ENSHGLG00000012886	VARS2	96	81.468	Heterocephalus_glaber_female
ENSUAMG00000026124	VARS2	99	83.931	ENSHGLG00100016535	VARS2	99	81.373	Heterocephalus_glaber_male
ENSUAMG00000026124	VARS2	78	49.461	ENSHCOG00000017907	vars2	94	52.131	Hippocampus_comes
ENSUAMG00000026124	VARS2	98	54.634	ENSIPUG00000015573	Vars2	95	53.243	Ictalurus_punctatus
ENSUAMG00000026124	VARS2	99	87.486	ENSSTOG00000009924	VARS2	99	86.038	Ictidomys_tridecemlineatus
ENSUAMG00000026124	VARS2	99	83.642	ENSJJAG00000011144	Vars2	99	81.853	Jaculus_jaculus
ENSUAMG00000026124	VARS2	99	53.003	ENSKMAG00000001393	vars2	96	51.947	Kryptolebias_marmoratus
ENSUAMG00000026124	VARS2	99	53.185	ENSLBEG00000011949	vars2	97	51.372	Labrus_bergylta
ENSUAMG00000026124	VARS2	59	64.140	ENSLBEG00000005480	-	81	63.949	Labrus_bergylta
ENSUAMG00000026124	VARS2	97	54.895	ENSLACG00000001576	-	99	53.346	Latimeria_chalumnae
ENSUAMG00000026124	VARS2	99	86.433	ENSLAFG00000015183	VARS2	99	84.834	Loxodonta_africana
ENSUAMG00000026124	VARS2	99	87.717	ENSMFAG00000042367	VARS2	99	86.239	Macaca_fascicularis
ENSUAMG00000026124	VARS2	99	87.826	ENSMMUG00000018609	VARS2	99	86.334	Macaca_mulatta
ENSUAMG00000026124	VARS2	99	88.261	ENSMNEG00000043163	VARS2	99	86.711	Macaca_nemestrina
ENSUAMG00000026124	VARS2	99	88.478	ENSMLEG00000041728	VARS2	97	86.899	Mandrillus_leucophaeus
ENSUAMG00000026124	VARS2	99	52.321	ENSMAMG00000020339	vars2	98	50.798	Mastacembelus_armatus
ENSUAMG00000026124	VARS2	99	52.804	ENSMZEG00005017669	vars2	99	50.929	Maylandia_zebra
ENSUAMG00000026124	VARS2	100	84.182	ENSMAUG00000018946	Vars2	100	82.237	Mesocricetus_auratus
ENSUAMG00000026124	VARS2	87	87.995	ENSMICG00000005365	VARS2	100	87.780	Microcebus_murinus
ENSUAMG00000026124	VARS2	93	87.445	ENSMOCG00000014607	Vars2	100	85.455	Microtus_ochrogaster
ENSUAMG00000026124	VARS2	99	53.169	ENSMMOG00000012122	vars2	97	51.483	Mola_mola
ENSUAMG00000026124	VARS2	99	77.199	ENSMODG00000015848	VARS2	99	74.859	Monodelphis_domestica
ENSUAMG00000026124	VARS2	99	53.537	ENSMALG00000009217	vars2	99	51.445	Monopterus_albus
ENSUAMG00000026124	VARS2	100	83.839	MGP_CAROLIEiJ_G0021529	Vars2	100	82.220	Mus_caroli
ENSUAMG00000026124	VARS2	100	83.731	ENSMUSG00000038838	Vars2	100	82.220	Mus_musculus
ENSUAMG00000026124	VARS2	100	83.948	MGP_PahariEiJ_G0020523	Vars2	100	82.408	Mus_pahari
ENSUAMG00000026124	VARS2	100	83.731	MGP_SPRETEiJ_G0022436	Vars2	100	82.314	Mus_spretus
ENSUAMG00000026124	VARS2	100	92.733	ENSMPUG00000011643	VARS2	100	91.627	Mustela_putorius_furo
ENSUAMG00000026124	VARS2	99	85.899	ENSMLUG00000002356	VARS2	97	84.486	Myotis_lucifugus
ENSUAMG00000026124	VARS2	99	79.674	ENSNGAG00000020607	Vars2	100	75.445	Nannospalax_galili
ENSUAMG00000026124	VARS2	66	51.368	ENSNBRG00000001624	vars2	57	52.486	Neolamprologus_brichardi
ENSUAMG00000026124	VARS2	99	83.696	ENSNLEG00000005625	VARS2	97	82.846	Nomascus_leucogenys
ENSUAMG00000026124	VARS2	89	73.980	ENSMEUG00000014475	VARS2	89	74.124	Notamacropus_eugenii
ENSUAMG00000026124	VARS2	88	87.059	ENSOPRG00000000682	VARS2	90	80.531	Ochotona_princeps
ENSUAMG00000026124	VARS2	99	83.460	ENSODEG00000017965	VARS2	99	81.338	Octodon_degus
ENSUAMG00000026124	VARS2	99	37.075	ENSONIG00000004734	vars2	99	37.898	Oreochromis_niloticus
ENSUAMG00000026124	VARS2	94	61.795	ENSOANG00000000398	-	99	61.795	Ornithorhynchus_anatinus
ENSUAMG00000026124	VARS2	94	88.571	ENSOCUG00000021496	VARS2	58	88.571	Oryctolagus_cuniculus
ENSUAMG00000026124	VARS2	95	54.000	ENSORLG00000010632	vars2	93	52.311	Oryzias_latipes
ENSUAMG00000026124	VARS2	99	52.225	ENSORLG00020018584	vars2	97	50.658	Oryzias_latipes_hni
ENSUAMG00000026124	VARS2	99	51.848	ENSORLG00015010408	vars2	97	50.611	Oryzias_latipes_hsok
ENSUAMG00000026124	VARS2	99	52.331	ENSOMEG00000008360	vars2	97	50.659	Oryzias_melastigma
ENSUAMG00000026124	VARS2	99	87.093	ENSOGAG00000006087	VARS2	97	85.795	Otolemur_garnettii
ENSUAMG00000026124	VARS2	99	87.650	ENSOARG00000010844	VARS2	98	86.064	Ovis_aries
ENSUAMG00000026124	VARS2	99	88.043	ENSPPAG00000041141	VARS2	99	86.522	Pan_paniscus
ENSUAMG00000026124	VARS2	100	90.889	ENSPPRG00000006751	VARS2	97	89.746	Panthera_pardus
ENSUAMG00000026124	VARS2	100	91.215	ENSPTIG00000017799	VARS2	98	90.572	Panthera_tigris_altaica
ENSUAMG00000026124	VARS2	99	88.043	ENSPTRG00000034497	VARS2	99	86.522	Pan_troglodytes
ENSUAMG00000026124	VARS2	99	88.370	ENSPANG00000018481	VARS2	100	87.041	Papio_anubis
ENSUAMG00000026124	VARS2	99	55.388	ENSPKIG00000011372	vars2	97	53.537	Paramormyrops_kingsleyae
ENSUAMG00000026124	VARS2	68	69.255	ENSPSIG00000006206	VARS2	92	68.673	Pelodiscus_sinensis
ENSUAMG00000026124	VARS2	95	55.667	ENSPMGG00000000465	vars2	93	53.945	Periophthalmus_magnuspinnatus
ENSUAMG00000026124	VARS2	99	84.573	ENSPEMG00000014691	Vars2	99	82.844	Peromyscus_maniculatus_bairdii
ENSUAMG00000026124	VARS2	99	79.085	ENSPCIG00000015040	VARS2	99	76.959	Phascolarctos_cinereus
ENSUAMG00000026124	VARS2	99	52.929	ENSPFOG00000017616	vars2	97	51.038	Poecilia_formosa
ENSUAMG00000026124	VARS2	99	52.548	ENSPLAG00000019778	vars2	97	50.760	Poecilia_latipinna
ENSUAMG00000026124	VARS2	99	52.654	ENSPMEG00000011123	vars2	97	50.856	Poecilia_mexicana
ENSUAMG00000026124	VARS2	95	47.677	ENSPREG00000014998	vars2	95	46.404	Poecilia_reticulata
ENSUAMG00000026124	VARS2	99	88.152	ENSPPYG00000016424	VARS2	99	86.711	Pongo_abelii
ENSUAMG00000026124	VARS2	77	86.957	ENSPCAG00000006946	VARS2	84	79.800	Procavia_capensis
ENSUAMG00000026124	VARS2	99	86.132	ENSPCOG00000014839	VARS2	97	85.150	Propithecus_coquereli
ENSUAMG00000026124	VARS2	99	88.165	ENSPVAG00000004197	VARS2	99	86.158	Pteropus_vampyrus
ENSUAMG00000026124	VARS2	90	61.468	ENSPNYG00000010314	vars2	99	60.598	Pundamilia_nyererei
ENSUAMG00000026124	VARS2	98	54.877	ENSPNAG00000026793	vars2	94	53.630	Pygocentrus_nattereri
ENSUAMG00000026124	VARS2	100	83.839	ENSRNOG00000000833	Vars2	100	82.408	Rattus_norvegicus
ENSUAMG00000026124	VARS2	99	88.261	ENSRBIG00000032725	VARS2	99	86.616	Rhinopithecus_bieti
ENSUAMG00000026124	VARS2	99	88.043	ENSRROG00000043847	VARS2	99	86.616	Rhinopithecus_roxellana
ENSUAMG00000026124	VARS2	100	85.064	ENSSBOG00000033240	VARS2	97	84.055	Saimiri_boliviensis_boliviensis
ENSUAMG00000026124	VARS2	99	78.214	ENSSHAG00000009307	VARS2	100	75.449	Sarcophilus_harrisii
ENSUAMG00000026124	VARS2	99	54.237	ENSSFOG00015016187	vars2	98	52.239	Scleropages_formosus
ENSUAMG00000026124	VARS2	99	54.243	ENSSMAG00000020842	vars2	97	52.964	Scophthalmus_maximus
ENSUAMG00000026124	VARS2	99	53.135	ENSSDUG00000011598	vars2	97	51.610	Seriola_dumerili
ENSUAMG00000026124	VARS2	99	53.548	ENSSLDG00000015492	vars2	97	51.292	Seriola_lalandi_dorsalis
ENSUAMG00000026124	VARS2	66	89.781	ENSSARG00000003786	-	70	89.781	Sorex_araneus
ENSUAMG00000026124	VARS2	96	59.977	ENSSPUG00000014700	VARS2	94	60.532	Sphenodon_punctatus
ENSUAMG00000026124	VARS2	99	50.964	ENSSPAG00000004654	vars2	97	49.571	Stegastes_partitus
ENSUAMG00000026124	VARS2	100	89.154	ENSSSCG00000001384	VARS2	99	88.698	Sus_scrofa
ENSUAMG00000026124	VARS2	99	53.664	ENSTRUG00000005264	vars2	99	52.015	Takifugu_rubripes
ENSUAMG00000026124	VARS2	99	54.780	ENSTNIG00000005916	vars2	99	51.634	Tetraodon_nigroviridis
ENSUAMG00000026124	VARS2	55	94.030	ENSTBEG00000007976	-	53	94.030	Tupaia_belangeri
ENSUAMG00000026124	VARS2	100	74.788	ENSTTRG00000012243	VARS2	99	74.788	Tursiops_truncatus
ENSUAMG00000026124	VARS2	100	99.132	ENSUMAG00000019894	VARS2	100	98.401	Ursus_maritimus
ENSUAMG00000026124	VARS2	100	91.757	ENSVVUG00000010754	VARS2	95	89.840	Vulpes_vulpes
ENSUAMG00000026124	VARS2	96	54.515	ENSXETG00000003036	vars2	99	55.036	Xenopus_tropicalis
ENSUAMG00000026124	VARS2	95	54.443	ENSXCOG00000003455	vars2	95	52.400	Xiphophorus_couchianus
ENSUAMG00000026124	VARS2	99	52.215	ENSXMAG00000013523	vars2	97	50.378	Xiphophorus_maculatus