EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000026154 (Gene tree)
Gene ID: -
Gene Symbol: ZNF408
Alias: FLJ12827
Full Name: zinc finger protein 408
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 4897 bases
Position: chrLZNR01006542.1:24013-28909
Accession: 20041
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000034391	zf-C2H2	PF00096.26	4.9e-40	1	7
ENSUAMP00000034391	zf-C2H2	PF00096.26	4.9e-40	2	7
ENSUAMP00000034391	zf-C2H2	PF00096.26	4.9e-40	3	7
ENSUAMP00000034391	zf-C2H2	PF00096.26	4.9e-40	4	7
ENSUAMP00000034391	zf-C2H2	PF00096.26	4.9e-40	5	7
ENSUAMP00000034391	zf-C2H2	PF00096.26	4.9e-40	6	7
ENSUAMP00000034391	zf-C2H2	PF00096.26	4.9e-40	7	7
ENSUAMP00000034391	zf-met	PF12874.7	2.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000038298	ZNF408-201	2160	-	ENSUAMP00000034391	719 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000026154's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000026154's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000026154	ZNF408	50	30.769	ENSUAMG00000016827	ZNF319	85	31.667
ENSUAMG00000026154	ZNF408	56	32.984	ENSUAMG00000008738	ZNF646	63	32.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000026154	ZNF408	99	81.704	ENSG00000175213	ZNF408	100	81.680	Homo_sapiens
ENSUAMG00000026154	ZNF408	100	96.801	ENSAMEG00000006904	ZNF408	100	96.801	Ailuropoda_melanoleuca
ENSUAMG00000026154	ZNF408	98	75.348	ENSANAG00000036294	ZNF408	100	74.488	Aotus_nancymaae
ENSUAMG00000026154	ZNF408	93	38.107	ENSAMXG00000032642	znf408	74	47.732	Astyanax_mexicanus
ENSUAMG00000026154	ZNF408	99	79.888	ENSCJAG00000019859	ZNF408	100	79.752	Callithrix_jacchus
ENSUAMG00000026154	ZNF408	100	88.066	ENSCAFG00000009143	ZNF408	97	88.477	Canis_familiaris
ENSUAMG00000026154	ZNF408	100	87.929	ENSCAFG00020019155	ZNF408	97	88.340	Canis_lupus_dingo
ENSUAMG00000026154	ZNF408	82	79.496	ENSCHIG00000025346	ZNF408	97	79.832	Capra_hircus
ENSUAMG00000026154	ZNF408	100	77.517	ENSTSYG00000025443	ZNF408	100	77.793	Carlito_syrichta
ENSUAMG00000026154	ZNF408	99	79.469	ENSCCAG00000029472	ZNF408	100	79.201	Cebus_capucinus
ENSUAMG00000026154	ZNF408	57	95.517	ENSCHOG00000009909	ZNF408	75	95.517	Choloepus_hoffmanni
ENSUAMG00000026154	ZNF408	100	69.421	ENSCGRG00001023588	Zfp408	100	69.146	Cricetulus_griseus_chok1gshd
ENSUAMG00000026154	ZNF408	100	69.421	ENSCGRG00000017618	Zfp408	100	69.146	Cricetulus_griseus_crigri
ENSUAMG00000026154	ZNF408	100	75.862	ENSDNOG00000047669	ZNF408	100	76.000	Dasypus_novemcinctus
ENSUAMG00000026154	ZNF408	99	69.846	ENSDORG00000000387	Zfp408	99	69.846	Dipodomys_ordii
ENSUAMG00000026154	ZNF408	92	62.167	ENSETEG00000017621	-	100	63.009	Echinops_telfairi
ENSUAMG00000026154	ZNF408	100	81.793	ENSEASG00005015461	ZNF408	100	81.793	Equus_asinus_asinus
ENSUAMG00000026154	ZNF408	100	81.931	ENSECAG00000010878	ZNF408	100	81.931	Equus_caballus
ENSUAMG00000026154	ZNF408	94	70.000	ENSEEUG00000010466	ZNF408	94	70.147	Erinaceus_europaeus
ENSUAMG00000026154	ZNF408	100	87.172	ENSFCAG00000029105	ZNF408	100	87.172	Felis_catus
ENSUAMG00000026154	ZNF408	93	35.215	ENSGAFG00000018557	-	59	46.539	Gambusia_affinis
ENSUAMG00000026154	ZNF408	99	81.564	ENSGGOG00000010152	ZNF408	100	81.543	Gorilla_gorilla
ENSUAMG00000026154	ZNF408	86	79.936	ENSLAFG00000027848	ZNF408	100	79.936	Loxodonta_africana
ENSUAMG00000026154	ZNF408	99	82.517	ENSMICG00000045320	ZNF408	100	82.345	Microcebus_murinus
ENSUAMG00000026154	ZNF408	73	54.872	ENSMODG00000019895	-	88	55.190	Monodelphis_domestica
ENSUAMG00000026154	ZNF408	98	88.062	ENSMPUG00000005490	ZNF408	100	87.845	Mustela_putorius_furo
ENSUAMG00000026154	ZNF408	99	69.958	ENSNGAG00000000309	Zfp408	99	70.376	Nannospalax_galili
ENSUAMG00000026154	ZNF408	100	80.716	ENSNLEG00000014132	ZNF408	100	80.854	Nomascus_leucogenys
ENSUAMG00000026154	ZNF408	99	63.687	ENSOPRG00000009225	ZNF408	99	63.408	Ochotona_princeps
ENSUAMG00000026154	ZNF408	100	75.586	ENSOCUG00000010953	ZNF408	100	75.586	Oryctolagus_cuniculus
ENSUAMG00000026154	ZNF408	86	82.183	ENSOGAG00000034080	ZNF408	100	82.183	Otolemur_garnettii
ENSUAMG00000026154	ZNF408	99	81.704	ENSPPAG00000034993	ZNF408	100	81.680	Pan_paniscus
ENSUAMG00000026154	ZNF408	100	87.172	ENSPPRG00000016866	ZNF408	100	87.172	Panthera_pardus
ENSUAMG00000026154	ZNF408	100	88.138	ENSPTIG00000015467	ZNF408	100	88.138	Panthera_tigris_altaica
ENSUAMG00000026154	ZNF408	99	81.844	ENSPTRG00000003551	ZNF408	100	81.818	Pan_troglodytes
ENSUAMG00000026154	ZNF408	77	71.607	ENSPEMG00000016757	Zfp408	99	71.607	Peromyscus_maniculatus_bairdii
ENSUAMG00000026154	ZNF408	93	35.074	ENSPFOG00000001760	-	92	49.091	Poecilia_formosa
ENSUAMG00000026154	ZNF408	52	49.737	ENSPMEG00000021147	-	72	49.737	Poecilia_mexicana
ENSUAMG00000026154	ZNF408	93	35.629	ENSPREG00000017068	-	59	46.301	Poecilia_reticulata
ENSUAMG00000026154	ZNF408	99	80.731	ENSPPYG00000003318	ZNF408	100	81.229	Pongo_abelii
ENSUAMG00000026154	ZNF408	100	75.000	ENSPCAG00000014001	ZNF408	100	74.862	Procavia_capensis
ENSUAMG00000026154	ZNF408	99	83.101	ENSPCOG00000028698	ZNF408	100	82.920	Propithecus_coquereli
ENSUAMG00000026154	ZNF408	100	83.750	ENSPVAG00000015791	ZNF408	100	83.750	Pteropus_vampyrus
ENSUAMG00000026154	ZNF408	99	79.301	ENSSBOG00000033023	ZNF408	100	79.034	Saimiri_boliviensis_boliviensis
ENSUAMG00000026154	ZNF408	100	81.379	ENSSSCG00000023097	ZNF408	97	81.379	Sus_scrofa
ENSUAMG00000026154	ZNF408	76	90.119	ENSTBEG00000004260	ZNF408	83	90.119	Tupaia_belangeri
ENSUAMG00000026154	ZNF408	100	99.583	ENSUMAG00000014405	ZNF408	100	99.583	Ursus_maritimus
ENSUAMG00000026154	ZNF408	100	87.517	ENSVVUG00000026805	ZNF408	97	87.791	Vulpes_vulpes
ENSUAMG00000026154	ZNF408	51	55.673	ENSXETG00000001980	znf408	100	55.145	Xenopus_tropicalis
ENSUAMG00000026154	ZNF408	52	49.337	ENSXCOG00000002869	-	75	47.927	Xiphophorus_couchianus
ENSUAMG00000026154	ZNF408	52	49.077	ENSXMAG00000018347	-	72	49.077	Xiphophorus_maculatus