EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000026235 (Gene tree)
Gene ID: -
Gene Symbol: GPATCH3
Alias: FLJ12455|GPATC3
Full Name: G-patch domain containing 3
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 8237 bases
Position: chrLZNR01005805.1:137442-145678
Accession: 25720
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000034508	G-patch	PF01585.23	2.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000038425	GPATCH3-201	2105	-	ENSUAMP00000034508	519 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000026235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000026235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000026235	GPATCH3	100	86.857	ENSG00000198746	GPATCH3	100	92.969	Homo_sapiens
ENSUAMG00000026235	GPATCH3	95	54.813	ENSAPOG00000001212	gpatch3	97	54.813	Acanthochromis_polyacanthus
ENSUAMG00000026235	GPATCH3	100	98.651	ENSAMEG00000010801	GPATCH3	100	98.651	Ailuropoda_melanoleuca
ENSUAMG00000026235	GPATCH3	95	57.396	ENSAOCG00000019352	gpatch3	97	56.213	Amphiprion_ocellaris
ENSUAMG00000026235	GPATCH3	95	57.199	ENSAPEG00000018926	gpatch3	97	55.819	Amphiprion_percula
ENSUAMG00000026235	GPATCH3	95	53.620	ENSATEG00000023759	gpatch3	97	53.229	Anabas_testudineus
ENSUAMG00000026235	GPATCH3	65	72.674	ENSAPLG00000010745	GPATCH3	99	72.674	Anas_platyrhynchos
ENSUAMG00000026235	GPATCH3	96	57.443	ENSACAG00000016709	GPATCH3	95	57.529	Anolis_carolinensis
ENSUAMG00000026235	GPATCH3	98	86.628	ENSANAG00000035944	GPATCH3	99	86.914	Aotus_nancymaae
ENSUAMG00000026235	GPATCH3	94	54.600	ENSACLG00000012807	gpatch3	95	54.400	Astatotilapia_calliptera
ENSUAMG00000026235	GPATCH3	95	54.453	ENSAMXG00000034582	gpatch3	96	53.846	Astyanax_mexicanus
ENSUAMG00000026235	GPATCH3	100	88.054	ENSBTAG00000014849	GPATCH3	100	88.054	Bos_taurus
ENSUAMG00000026235	GPATCH3	94	36.174	WBGene00019467	K07B1.7	93	36.084	Caenorhabditis_elegans
ENSUAMG00000026235	GPATCH3	100	85.227	ENSCJAG00000010000	GPATCH3	97	86.523	Callithrix_jacchus
ENSUAMG00000026235	GPATCH3	100	94.605	ENSCAFG00000012265	GPATCH3	100	94.605	Canis_familiaris
ENSUAMG00000026235	GPATCH3	100	94.605	ENSCAFG00020021640	GPATCH3	100	94.605	Canis_lupus_dingo
ENSUAMG00000026235	GPATCH3	100	88.247	ENSCHIG00000024245	GPATCH3	98	88.247	Capra_hircus
ENSUAMG00000026235	GPATCH3	100	87.619	ENSTSYG00000011753	GPATCH3	100	87.810	Carlito_syrichta
ENSUAMG00000026235	GPATCH3	62	84.472	ENSCAPG00000007313	GPATCH3	96	84.472	Cavia_aperea
ENSUAMG00000026235	GPATCH3	97	84.736	ENSCPOG00000010404	GPATCH3	98	84.736	Cavia_porcellus
ENSUAMG00000026235	GPATCH3	98	85.271	ENSCCAG00000030482	GPATCH3	99	85.547	Cebus_capucinus
ENSUAMG00000026235	GPATCH3	100	84.381	ENSCATG00000033598	GPATCH3	98	85.156	Cercocebus_atys
ENSUAMG00000026235	GPATCH3	98	84.813	ENSCLAG00000012064	GPATCH3	100	84.586	Chinchilla_lanigera
ENSUAMG00000026235	GPATCH3	97	66.403	ENSCPBG00000024968	GPATCH3	94	67.002	Chrysemys_picta_bellii
ENSUAMG00000026235	GPATCH3	100	87.238	ENSCANG00000036795	GPATCH3	98	88.086	Colobus_angolensis_palliatus
ENSUAMG00000026235	GPATCH3	100	82.500	ENSCGRG00001002930	Gpatch3	100	82.885	Cricetulus_griseus_chok1gshd
ENSUAMG00000026235	GPATCH3	100	82.500	ENSCGRG00000004699	Gpatch3	100	82.885	Cricetulus_griseus_crigri
ENSUAMG00000026235	GPATCH3	94	56.719	ENSCSEG00000005277	gpatch3	96	56.324	Cynoglossus_semilaevis
ENSUAMG00000026235	GPATCH3	95	53.320	ENSCVAG00000000827	gpatch3	97	54.102	Cyprinodon_variegatus
ENSUAMG00000026235	GPATCH3	96	66.527	ENSDARG00000052747	gpatch3	67	68.720	Danio_rerio
ENSUAMG00000026235	GPATCH3	100	86.450	ENSDNOG00000016999	GPATCH3	100	86.450	Dasypus_novemcinctus
ENSUAMG00000026235	GPATCH3	93	45.850	ENSEBUG00000013911	gpatch3	91	45.040	Eptatretus_burgeri
ENSUAMG00000026235	GPATCH3	100	90.192	ENSEASG00005008636	GPATCH3	100	90.385	Equus_asinus_asinus
ENSUAMG00000026235	GPATCH3	100	90.385	ENSECAG00000007653	GPATCH3	100	90.577	Equus_caballus
ENSUAMG00000026235	GPATCH3	95	54.980	ENSELUG00000000963	gpatch3	97	55.378	Esox_lucius
ENSUAMG00000026235	GPATCH3	100	91.538	ENSFCAG00000012819	GPATCH3	98	92.110	Felis_catus
ENSUAMG00000026235	GPATCH3	67	71.182	ENSFALG00000000319	GPATCH3	93	71.681	Ficedula_albicollis
ENSUAMG00000026235	GPATCH3	100	83.588	ENSFDAG00000016270	GPATCH3	100	82.824	Fukomys_damarensis
ENSUAMG00000026235	GPATCH3	95	55.599	ENSFHEG00000015264	gpatch3	97	56.385	Fundulus_heteroclitus
ENSUAMG00000026235	GPATCH3	94	54.475	ENSGMOG00000000991	gpatch3	97	54.191	Gadus_morhua
ENSUAMG00000026235	GPATCH3	97	62.305	ENSGALG00000000881	GPATCH3	94	61.277	Gallus_gallus
ENSUAMG00000026235	GPATCH3	94	54.688	ENSGAFG00000002531	gpatch3	91	63.063	Gambusia_affinis
ENSUAMG00000026235	GPATCH3	95	55.469	ENSGACG00000007199	gpatch3	97	55.078	Gasterosteus_aculeatus
ENSUAMG00000026235	GPATCH3	97	66.469	ENSGAGG00000023286	GPATCH3	94	66.801	Gopherus_agassizii
ENSUAMG00000026235	GPATCH3	100	87.238	ENSGGOG00000015305	GPATCH3	98	88.086	Gorilla_gorilla
ENSUAMG00000026235	GPATCH3	94	56.000	ENSHBUG00000020513	gpatch3	94	60.580	Haplochromis_burtoni
ENSUAMG00000026235	GPATCH3	100	83.969	ENSHGLG00000012492	GPATCH3	98	85.519	Heterocephalus_glaber_female
ENSUAMG00000026235	GPATCH3	100	83.969	ENSHGLG00100016909	GPATCH3	98	85.519	Heterocephalus_glaber_male
ENSUAMG00000026235	GPATCH3	94	56.262	ENSHCOG00000005739	gpatch3	96	56.262	Hippocampus_comes
ENSUAMG00000026235	GPATCH3	95	52.510	ENSIPUG00000007697	gpatch3	99	64.762	Ictalurus_punctatus
ENSUAMG00000026235	GPATCH3	100	86.641	ENSSTOG00000015220	GPATCH3	100	86.641	Ictidomys_tridecemlineatus
ENSUAMG00000026235	GPATCH3	100	82.890	ENSJJAG00000003292	Gpatch3	98	82.779	Jaculus_jaculus
ENSUAMG00000026235	GPATCH3	95	57.700	ENSKMAG00000020717	gpatch3	97	57.700	Kryptolebias_marmoratus
ENSUAMG00000026235	GPATCH3	94	54.028	ENSLBEG00000007046	gpatch3	95	53.816	Labrus_bergylta
ENSUAMG00000026235	GPATCH3	90	73.778	ENSLACG00000011400	GPATCH3	70	75.814	Latimeria_chalumnae
ENSUAMG00000026235	GPATCH3	95	55.709	ENSLOCG00000003858	gpatch3	98	56.461	Lepisosteus_oculatus
ENSUAMG00000026235	GPATCH3	99	86.260	ENSLAFG00000016691	GPATCH3	98	86.719	Loxodonta_africana
ENSUAMG00000026235	GPATCH3	100	87.810	ENSMFAG00000030918	GPATCH3	98	88.672	Macaca_fascicularis
ENSUAMG00000026235	GPATCH3	100	88.000	ENSMMUG00000018723	GPATCH3	98	88.867	Macaca_mulatta
ENSUAMG00000026235	GPATCH3	86	77.363	ENSMNEG00000033889	GPATCH3	94	77.263	Macaca_nemestrina
ENSUAMG00000026235	GPATCH3	100	87.810	ENSMLEG00000033364	GPATCH3	98	88.672	Mandrillus_leucophaeus
ENSUAMG00000026235	GPATCH3	95	56.496	ENSMAMG00000023975	gpatch3	97	56.299	Mastacembelus_armatus
ENSUAMG00000026235	GPATCH3	94	54.600	ENSMZEG00005019731	gpatch3	95	54.400	Maylandia_zebra
ENSUAMG00000026235	GPATCH3	68	69.081	ENSMGAG00000000813	GPATCH3	95	71.060	Meleagris_gallopavo
ENSUAMG00000026235	GPATCH3	100	81.132	ENSMAUG00000002005	Gpatch3	100	82.765	Mesocricetus_auratus
ENSUAMG00000026235	GPATCH3	100	88.381	ENSMICG00000015656	GPATCH3	100	88.571	Microcebus_murinus
ENSUAMG00000026235	GPATCH3	100	81.524	ENSMOCG00000022375	Gpatch3	100	82.095	Microtus_ochrogaster
ENSUAMG00000026235	GPATCH3	63	62.874	ENSMMOG00000008963	gpatch3	93	63.636	Mola_mola
ENSUAMG00000026235	GPATCH3	100	75.370	ENSMODG00000014417	GPATCH3	97	75.143	Monodelphis_domestica
ENSUAMG00000026235	GPATCH3	95	54.795	ENSMALG00000007586	gpatch3	97	53.125	Monopterus_albus
ENSUAMG00000026235	GPATCH3	100	84.190	MGP_CAROLIEiJ_G0026594	Gpatch3	100	84.190	Mus_caroli
ENSUAMG00000026235	GPATCH3	100	83.650	ENSMUSG00000028850	Gpatch3	98	84.405	Mus_musculus
ENSUAMG00000026235	GPATCH3	100	84.231	MGP_PahariEiJ_G0028927	Gpatch3	100	84.423	Mus_pahari
ENSUAMG00000026235	GPATCH3	100	83.619	MGP_SPRETEiJ_G0027575	Gpatch3	99	89.552	Mus_spretus
ENSUAMG00000026235	GPATCH3	100	94.605	ENSMPUG00000015665	GPATCH3	100	94.605	Mustela_putorius_furo
ENSUAMG00000026235	GPATCH3	100	88.077	ENSMLUG00000023528	GPATCH3	100	88.077	Myotis_lucifugus
ENSUAMG00000026235	GPATCH3	100	82.252	ENSNGAG00000006821	Gpatch3	100	81.853	Nannospalax_galili
ENSUAMG00000026235	GPATCH3	95	53.320	ENSNBRG00000000365	gpatch3	97	52.314	Neolamprologus_brichardi
ENSUAMG00000026235	GPATCH3	99	83.142	ENSNLEG00000009387	GPATCH3	97	83.890	Nomascus_leucogenys
ENSUAMG00000026235	GPATCH3	100	77.401	ENSMEUG00000003236	GPATCH3	97	76.938	Notamacropus_eugenii
ENSUAMG00000026235	GPATCH3	100	84.586	ENSOPRG00000016429	GPATCH3	100	84.586	Ochotona_princeps
ENSUAMG00000026235	GPATCH3	100	84.423	ENSODEG00000003292	GPATCH3	97	85.573	Octodon_degus
ENSUAMG00000026235	GPATCH3	96	57.228	ENSONIG00000006771	gpatch3	97	56.746	Oreochromis_niloticus
ENSUAMG00000026235	GPATCH3	88	80.562	ENSOCUG00000006411	GPATCH3	100	80.084	Oryctolagus_cuniculus
ENSUAMG00000026235	GPATCH3	94	54.314	ENSORLG00000004435	gpatch3	96	54.420	Oryzias_latipes
ENSUAMG00000026235	GPATCH3	94	54.191	ENSORLG00020022609	gpatch3	97	54.776	Oryzias_latipes_hni
ENSUAMG00000026235	GPATCH3	94	54.028	ENSORLG00015008692	gpatch3	92	61.709	Oryzias_latipes_hsok
ENSUAMG00000026235	GPATCH3	94	57.058	ENSOMEG00000010991	gpatch3	97	55.467	Oryzias_melastigma
ENSUAMG00000026235	GPATCH3	99	85.605	ENSOGAG00000011647	GPATCH3	98	86.328	Otolemur_garnettii
ENSUAMG00000026235	GPATCH3	100	88.054	ENSOARG00000003955	GPATCH3	98	88.054	Ovis_aries
ENSUAMG00000026235	GPATCH3	100	86.476	ENSPPAG00000032902	GPATCH3	98	87.305	Pan_paniscus
ENSUAMG00000026235	GPATCH3	100	91.731	ENSPPRG00000024244	GPATCH3	98	92.308	Panthera_pardus
ENSUAMG00000026235	GPATCH3	100	91.082	ENSPTIG00000014693	GPATCH3	98	90.661	Panthera_tigris_altaica
ENSUAMG00000026235	GPATCH3	100	86.857	ENSPTRG00000023419	GPATCH3	98	87.695	Pan_troglodytes
ENSUAMG00000026235	GPATCH3	100	87.429	ENSPANG00000007984	GPATCH3	98	88.281	Papio_anubis
ENSUAMG00000026235	GPATCH3	94	57.654	ENSPKIG00000020073	gpatch3	95	57.654	Paramormyrops_kingsleyae
ENSUAMG00000026235	GPATCH3	78	71.220	ENSPSIG00000017160	GPATCH3	97	71.500	Pelodiscus_sinensis
ENSUAMG00000026235	GPATCH3	94	54.200	ENSPMGG00000001703	gpatch3	96	55.040	Periophthalmus_magnuspinnatus
ENSUAMG00000026235	GPATCH3	100	82.700	ENSPEMG00000020632	Gpatch3	100	83.460	Peromyscus_maniculatus_bairdii
ENSUAMG00000026235	GPATCH3	100	74.624	ENSPCIG00000012681	GPATCH3	97	75.287	Phascolarctos_cinereus
ENSUAMG00000026235	GPATCH3	95	56.126	ENSPFOG00000009928	gpatch3	97	56.917	Poecilia_formosa
ENSUAMG00000026235	GPATCH3	95	53.861	ENSPLAG00000023784	gpatch3	97	54.633	Poecilia_latipinna
ENSUAMG00000026235	GPATCH3	95	54.757	ENSPMEG00000010268	gpatch3	97	55.253	Poecilia_mexicana
ENSUAMG00000026235	GPATCH3	95	56.426	ENSPREG00000008873	gpatch3	97	56.627	Poecilia_reticulata
ENSUAMG00000026235	GPATCH3	97	88.086	ENSPPYG00000001675	GPATCH3	98	88.281	Pongo_abelii
ENSUAMG00000026235	GPATCH3	100	85.115	ENSPCAG00000008286	GPATCH3	100	85.115	Procavia_capensis
ENSUAMG00000026235	GPATCH3	100	87.810	ENSPCOG00000020145	GPATCH3	100	88.000	Propithecus_coquereli
ENSUAMG00000026235	GPATCH3	100	82.342	ENSPVAG00000017282	GPATCH3	100	81.958	Pteropus_vampyrus
ENSUAMG00000026235	GPATCH3	94	54.600	ENSPNYG00000005172	gpatch3	98	54.400	Pundamilia_nyererei
ENSUAMG00000026235	GPATCH3	94	56.335	ENSPNAG00000018501	gpatch3	97	54.971	Pygocentrus_nattereri
ENSUAMG00000026235	GPATCH3	100	84.291	ENSRNOG00000007097	Gpatch3	100	84.674	Rattus_norvegicus
ENSUAMG00000026235	GPATCH3	100	87.429	ENSRBIG00000005853	GPATCH3	98	88.086	Rhinopithecus_bieti
ENSUAMG00000026235	GPATCH3	100	87.048	ENSRROG00000038382	GPATCH3	98	88.086	Rhinopithecus_roxellana
ENSUAMG00000026235	GPATCH3	98	86.240	ENSSBOG00000019680	GPATCH3	97	90.000	Saimiri_boliviensis_boliviensis
ENSUAMG00000026235	GPATCH3	98	75.526	ENSSHAG00000014268	GPATCH3	98	74.237	Sarcophilus_harrisii
ENSUAMG00000026235	GPATCH3	94	55.361	ENSSFOG00015009602	gpatch3	97	55.686	Scleropages_formosus
ENSUAMG00000026235	GPATCH3	95	55.599	ENSSMAG00000002067	gpatch3	97	55.599	Scophthalmus_maximus
ENSUAMG00000026235	GPATCH3	94	55.289	ENSSDUG00000017071	gpatch3	96	55.378	Seriola_dumerili
ENSUAMG00000026235	GPATCH3	94	55.090	ENSSLDG00000016549	gpatch3	96	55.179	Seriola_lalandi_dorsalis
ENSUAMG00000026235	GPATCH3	99	59.772	ENSSPUG00000018299	GPATCH3	98	59.844	Sphenodon_punctatus
ENSUAMG00000026235	GPATCH3	95	56.410	ENSSPAG00000013046	gpatch3	97	55.819	Stegastes_partitus
ENSUAMG00000026235	GPATCH3	100	88.889	ENSSSCG00000003564	GPATCH3	97	88.889	Sus_scrofa
ENSUAMG00000026235	GPATCH3	77	66.169	ENSTGUG00000000986	GPATCH3	99	66.250	Taeniopygia_guttata
ENSUAMG00000026235	GPATCH3	95	52.500	ENSTRUG00000013294	gpatch3	98	52.500	Takifugu_rubripes
ENSUAMG00000026235	GPATCH3	95	55.644	ENSTNIG00000009657	gpatch3	99	54.762	Tetraodon_nigroviridis
ENSUAMG00000026235	GPATCH3	84	88.953	ENSTBEG00000002042	GPATCH3	83	90.683	Tupaia_belangeri
ENSUAMG00000026235	GPATCH3	98	82.677	ENSTTRG00000016677	GPATCH3	97	82.051	Tursiops_truncatus
ENSUAMG00000026235	GPATCH3	100	99.615	ENSUMAG00000011894	GPATCH3	100	99.615	Ursus_maritimus
ENSUAMG00000026235	GPATCH3	100	94.990	ENSVVUG00000012041	GPATCH3	100	94.990	Vulpes_vulpes
ENSUAMG00000026235	GPATCH3	94	52.525	ENSXETG00000030345	GPATCH3	99	51.919	Xenopus_tropicalis
ENSUAMG00000026235	GPATCH3	95	52.218	ENSXCOG00000016129	gpatch3	97	52.218	Xiphophorus_couchianus
ENSUAMG00000026235	GPATCH3	95	55.382	ENSXMAG00000010749	gpatch3	97	55.382	Xiphophorus_maculatus