EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000026246 (Gene tree)
Gene ID: -
Gene Symbol: ZNF454
Alias: FLJ37444
Full Name: zinc finger protein 454
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 1311 bases
Position: chrLZNR01011702.1:11133-12443
Accession: 21200
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000034519	zf-C2H2	PF00096.26	3.2e-67	1	12
ENSUAMP00000034519	zf-C2H2	PF00096.26	3.2e-67	2	12
ENSUAMP00000034519	zf-C2H2	PF00096.26	3.2e-67	3	12
ENSUAMP00000034519	zf-C2H2	PF00096.26	3.2e-67	4	12
ENSUAMP00000034519	zf-C2H2	PF00096.26	3.2e-67	5	12
ENSUAMP00000034519	zf-C2H2	PF00096.26	3.2e-67	6	12
ENSUAMP00000034519	zf-C2H2	PF00096.26	3.2e-67	7	12
ENSUAMP00000034519	zf-C2H2	PF00096.26	3.2e-67	8	12
ENSUAMP00000034519	zf-C2H2	PF00096.26	3.2e-67	9	12
ENSUAMP00000034519	zf-C2H2	PF00096.26	3.2e-67	10	12
ENSUAMP00000034519	zf-C2H2	PF00096.26	3.2e-67	11	12
ENSUAMP00000034519	zf-C2H2	PF00096.26	3.2e-67	12	12
ENSUAMP00000034519	zf-met	PF12874.7	0.00013	1	2
ENSUAMP00000034519	zf-met	PF12874.7	0.00013	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000038436	ZNF454-201	1311	-	ENSUAMP00000034519	436 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000026246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000026246's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000026246	ZNF454	88	53.591	ENSUAMG00000005458	ZNF235	73	53.591
ENSUAMG00000026246	ZNF454	85	48.077	ENSUAMG00000017632	ZFP1	85	48.077
ENSUAMG00000026246	ZNF454	91	54.754	ENSUAMG00000012109	ZNF658	87	54.754
ENSUAMG00000026246	ZNF454	83	48.148	ENSUAMG00000014479	ZNF317	75	47.569
ENSUAMG00000026246	ZNF454	82	36.338	ENSUAMG00000023864	ZNF574	93	36.769
ENSUAMG00000026246	ZNF454	89	50.712	ENSUAMG00000027381	-	95	50.712
ENSUAMG00000026246	ZNF454	89	49.713	ENSUAMG00000027384	-	92	47.099
ENSUAMG00000026246	ZNF454	84	35.096	ENSUAMG00000019888	ZNF784	65	36.058
ENSUAMG00000026246	ZNF454	89	51.459	ENSUAMG00000000212	-	83	50.000
ENSUAMG00000026246	ZNF454	79	38.571	ENSUAMG00000004622	MAZ	76	38.571
ENSUAMG00000026246	ZNF454	97	30.921	ENSUAMG00000008738	ZNF646	77	30.798
ENSUAMG00000026246	ZNF454	83	31.942	ENSUAMG00000020195	ZNF628	59	49.756
ENSUAMG00000026246	ZNF454	89	50.133	ENSUAMG00000014969	ZNF112	77	50.693
ENSUAMG00000026246	ZNF454	85	45.217	ENSUAMG00000016706	-	93	46.023
ENSUAMG00000026246	ZNF454	82	43.636	ENSUAMG00000015024	ZNF770	78	43.636
ENSUAMG00000026246	ZNF454	95	56.863	ENSUAMG00000010469	ZNF582	82	56.863
ENSUAMG00000026246	ZNF454	99	50.000	ENSUAMG00000013694	ZNF234	95	50.437
ENSUAMG00000026246	ZNF454	89	52.116	ENSUAMG00000013693	ZNF226	77	52.355
ENSUAMG00000026246	ZNF454	87	34.615	ENSUAMG00000011794	ZNF526	85	35.371
ENSUAMG00000026246	ZNF454	81	50.000	ENSUAMG00000021858	-	71	50.000
ENSUAMG00000026246	ZNF454	89	46.246	ENSUAMG00000017817	-	96	48.711
ENSUAMG00000026246	ZNF454	81	39.381	ENSUAMG00000009994	PRDM5	60	39.381
ENSUAMG00000026246	ZNF454	88	43.020	ENSUAMG00000010517	-	84	43.020
ENSUAMG00000026246	ZNF454	92	37.766	ENSUAMG00000016827	ZNF319	92	40.169
ENSUAMG00000026246	ZNF454	80	48.333	ENSUAMG00000011329	ZFAT	54	48.333
ENSUAMG00000026246	ZNF454	89	53.125	ENSUAMG00000028270	-	92	53.125
ENSUAMG00000026246	ZNF454	92	60.680	ENSUAMG00000027191	-	93	60.680
ENSUAMG00000026246	ZNF454	88	42.697	ENSUAMG00000015472	ZNF236	67	42.169
ENSUAMG00000026246	ZNF454	89	51.825	ENSUAMG00000022172	-	51	50.980
ENSUAMG00000026246	ZNF454	89	60.619	ENSUAMG00000004882	-	67	60.619
ENSUAMG00000026246	ZNF454	87	35.714	ENSUAMG00000015014	PATZ1	51	32.174
ENSUAMG00000026246	ZNF454	95	52.261	ENSUAMG00000027415	-	87	52.261
ENSUAMG00000026246	ZNF454	89	57.877	ENSUAMG00000001062	-	99	57.877
ENSUAMG00000026246	ZNF454	89	41.204	ENSUAMG00000024556	ZNF652	76	41.204
ENSUAMG00000026246	ZNF454	89	49.394	ENSUAMG00000019652	-	88	49.394
ENSUAMG00000026246	ZNF454	85	35.644	ENSUAMG00000019189	GTF3A	95	40.541
ENSUAMG00000026246	ZNF454	89	50.932	ENSUAMG00000005918	-	97	51.594
ENSUAMG00000026246	ZNF454	83	37.712	ENSUAMG00000012111	ZFP64	70	34.232
ENSUAMG00000026246	ZNF454	89	51.984	ENSUAMG00000004827	-	68	51.984

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000026246	ZNF454	92	85.821	ENSCAPG00000006920	-	98	85.821	Cavia_aperea
ENSUAMG00000026246	ZNF454	92	85.821	ENSCPOG00000035563	-	98	85.821	Cavia_porcellus
ENSUAMG00000026246	ZNF454	100	83.937	ENSCATG00000031926	ZNF454	84	83.937	Cercocebus_atys
ENSUAMG00000026246	ZNF454	93	85.714	ENSCLAG00000010195	-	97	86.207	Chinchilla_lanigera
ENSUAMG00000026246	ZNF454	100	80.135	ENSCGRG00001013939	Zfp454	80	80.135	Cricetulus_griseus_chok1gshd
ENSUAMG00000026246	ZNF454	100	80.135	ENSCGRG00000014813	Zfp454	80	80.135	Cricetulus_griseus_crigri
ENSUAMG00000026246	ZNF454	100	89.593	ENSEASG00005012616	ZNF454	91	89.593	Equus_asinus_asinus
ENSUAMG00000026246	ZNF454	100	84.389	ENSEEUG00000007684	ZNF454	86	84.389	Erinaceus_europaeus
ENSUAMG00000026246	ZNF454	100	84.163	ENSMFAG00000043337	ZNF454	84	84.163	Macaca_fascicularis
ENSUAMG00000026246	ZNF454	100	84.163	ENSMMUG00000045647	ZNF454	84	84.163	Macaca_mulatta
ENSUAMG00000026246	ZNF454	100	84.163	ENSMNEG00000002699	ZNF454	84	84.163	Macaca_nemestrina
ENSUAMG00000026246	ZNF454	100	84.163	ENSMLEG00000039955	ZNF454	84	84.163	Mandrillus_leucophaeus
ENSUAMG00000026246	ZNF454	100	78.604	ENSMUSG00000048728	Zfp454	99	79.908	Mus_musculus
ENSUAMG00000026246	ZNF454	100	88.009	ENSMLUG00000002894	ZNF454	85	88.009	Myotis_lucifugus
ENSUAMG00000026246	ZNF454	100	84.389	ENSPANG00000009509	ZNF454	84	84.389	Papio_anubis
ENSUAMG00000026246	ZNF454	100	87.783	ENSSSCG00000027351	ZNF454	84	87.783	Sus_scrofa
ENSUAMG00000026246	ZNF454	100	99.541	ENSUMAG00000023930	ZNF454	88	99.541	Ursus_maritimus
ENSUAMG00000026246	ZNF454	100	91.743	ENSVVUG00000001267	ZNF454	71	91.743	Vulpes_vulpes