EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000026385 (Gene tree)
Gene ID: -
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 42783 bases
Position: chrLZNR01011741.1:221860-264642
Accession: 23207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000034758	Rif1_N	PF12231.8	3.8e-20	1	1
ENSUAMP00000034756	Rif1_N	PF12231.8	3.9e-20	1	1
ENSUAMP00000034760	Rif1_N	PF12231.8	4.3e-20	1	1
ENSUAMP00000034759	Rif1_N	PF12231.8	4.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000038705	RIF1-204	6567	-	ENSUAMP00000034760	2188 (aa)	-	-
ENSUAMT00000038704	RIF1-203	6756	-	ENSUAMP00000034759	2251 (aa)	-	-
ENSUAMT00000038701	RIF1-201	6732	-	ENSUAMP00000034756	2243 (aa)	-	-
ENSUAMT00000038703	RIF1-202	6654	-	ENSUAMP00000034758	2217 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000026385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000026385's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000026385	RIF1	97	89.514	ENSG00000080345	RIF1	86	89.514	Homo_sapiens
ENSUAMG00000026385	RIF1	99	96.195	ENSAMEG00000008461	RIF1	90	96.195	Ailuropoda_melanoleuca
ENSUAMG00000026385	RIF1	60	47.098	ENSACIG00000017765	rif1	59	47.098	Amphilophus_citrinellus
ENSUAMG00000026385	RIF1	59	47.461	ENSAOCG00000017231	rif1	55	47.461	Amphiprion_ocellaris
ENSUAMG00000026385	RIF1	58	52.542	ENSAPEG00000013228	rif1	52	50.077	Amphiprion_percula
ENSUAMG00000026385	RIF1	62	46.918	ENSATEG00000022887	rif1	57	46.918	Anabas_testudineus
ENSUAMG00000026385	RIF1	83	65.875	ENSAPLG00000007092	RIF1	86	65.875	Anas_platyrhynchos
ENSUAMG00000026385	RIF1	81	57.429	ENSACAG00000003714	RIF1	80	57.429	Anolis_carolinensis
ENSUAMG00000026385	RIF1	99	78.377	ENSANAG00000024840	RIF1	86	88.506	Aotus_nancymaae
ENSUAMG00000026385	RIF1	61	46.093	ENSAMXG00000010910	rif1	58	46.093	Astyanax_mexicanus
ENSUAMG00000026385	RIF1	97	90.013	ENSBTAG00000021020	RIF1	92	90.013	Bos_taurus
ENSUAMG00000026385	RIF1	99	77.619	ENSCJAG00000003138	RIF1	90	77.664	Callithrix_jacchus
ENSUAMG00000026385	RIF1	98	93.854	ENSCAFG00000005670	RIF1	84	93.854	Canis_familiaris
ENSUAMG00000026385	RIF1	98	93.854	ENSCAFG00020016401	RIF1	86	93.854	Canis_lupus_dingo
ENSUAMG00000026385	RIF1	97	88.988	ENSCHIG00000020327	RIF1	86	88.988	Capra_hircus
ENSUAMG00000026385	RIF1	99	79.091	ENSTSYG00000008861	RIF1	93	79.135	Carlito_syrichta
ENSUAMG00000026385	RIF1	84	76.755	ENSCAPG00000008957	RIF1	93	76.755	Cavia_aperea
ENSUAMG00000026385	RIF1	99	69.399	ENSCPOG00000037898	RIF1	90	69.577	Cavia_porcellus
ENSUAMG00000026385	RIF1	99	79.011	ENSCCAG00000024760	RIF1	91	79.101	Cebus_capucinus
ENSUAMG00000026385	RIF1	99	79.527	ENSCATG00000033353	RIF1	90	79.527	Cercocebus_atys
ENSUAMG00000026385	RIF1	99	72.699	ENSCLAG00000001517	RIF1	94	72.699	Chinchilla_lanigera
ENSUAMG00000026385	RIF1	99	79.483	ENSCSAG00000016089	RIF1	90	79.483	Chlorocebus_sabaeus
ENSUAMG00000026385	RIF1	96	74.977	ENSCHOG00000007187	RIF1	87	74.977	Choloepus_hoffmanni
ENSUAMG00000026385	RIF1	89	68.698	ENSCPBG00000025885	RIF1	88	69.252	Chrysemys_picta_bellii
ENSUAMG00000026385	RIF1	99	79.447	ENSCANG00000028962	RIF1	91	79.447	Colobus_angolensis_palliatus
ENSUAMG00000026385	RIF1	99	68.273	ENSCGRG00001024589	Rif1	90	68.452	Cricetulus_griseus_chok1gshd
ENSUAMG00000026385	RIF1	99	69.532	ENSCGRG00000010713	Rif1	91	69.710	Cricetulus_griseus_crigri
ENSUAMG00000026385	RIF1	56	55.039	ENSCSEG00000003945	rif1	54	55.039	Cynoglossus_semilaevis
ENSUAMG00000026385	RIF1	59	47.941	ENSCVAG00000022479	rif1	57	47.941	Cyprinodon_variegatus
ENSUAMG00000026385	RIF1	58	47.154	ENSDARG00000062650	rif1	55	47.154	Danio_rerio
ENSUAMG00000026385	RIF1	99	76.109	ENSDNOG00000011194	RIF1	87	76.109	Dasypus_novemcinctus
ENSUAMG00000026385	RIF1	93	71.852	ENSETEG00000012421	RIF1	82	71.852	Echinops_telfairi
ENSUAMG00000026385	RIF1	97	89.231	ENSEASG00005023434	RIF1	90	89.313	Equus_asinus_asinus
ENSUAMG00000026385	RIF1	97	91.154	ENSECAG00000012679	RIF1	90	90.758	Equus_caballus
ENSUAMG00000026385	RIF1	97	94.473	ENSFCAG00000029742	RIF1	86	94.473	Felis_catus
ENSUAMG00000026385	RIF1	82	64.329	ENSFALG00000013874	RIF1	87	64.939	Ficedula_albicollis
ENSUAMG00000026385	RIF1	97	85.403	ENSFDAG00000006538	RIF1	86	85.403	Fukomys_damarensis
ENSUAMG00000026385	RIF1	58	48.384	ENSFHEG00000013721	rif1	66	44.781	Fundulus_heteroclitus
ENSUAMG00000026385	RIF1	83	64.897	ENSGALG00000012484	RIF1	87	65.192	Gallus_gallus
ENSUAMG00000026385	RIF1	59	47.948	ENSGAFG00000017196	rif1	55	52.283	Gambusia_affinis
ENSUAMG00000026385	RIF1	55	55.833	ENSGACG00000008579	rif1	55	55.328	Gasterosteus_aculeatus
ENSUAMG00000026385	RIF1	87	66.313	ENSGAGG00000012595	RIF1	90	66.844	Gopherus_agassizii
ENSUAMG00000026385	RIF1	88	89.348	ENSGGOG00000040178	RIF1	86	89.348	Gorilla_gorilla
ENSUAMG00000026385	RIF1	70	54.902	ENSHBUG00000007125	rif1	55	54.902	Haplochromis_burtoni
ENSUAMG00000026385	RIF1	94	73.248	ENSHGLG00100009807	RIF1	90	73.248	Heterocephalus_glaber_male
ENSUAMG00000026385	RIF1	59	46.123	ENSHCOG00000015943	rif1	51	45.980	Hippocampus_comes
ENSUAMG00000026385	RIF1	58	50.909	ENSIPUG00000021703	rif1	54	50.604	Ictalurus_punctatus
ENSUAMG00000026385	RIF1	97	87.836	ENSSTOG00000020712	RIF1	86	87.836	Ictidomys_tridecemlineatus
ENSUAMG00000026385	RIF1	99	69.482	ENSJJAG00000023000	Rif1	91	69.660	Jaculus_jaculus
ENSUAMG00000026385	RIF1	59	48.538	ENSKMAG00000002852	rif1	57	48.538	Kryptolebias_marmoratus
ENSUAMG00000026385	RIF1	60	47.919	ENSLBEG00000023196	rif1	51	47.919	Labrus_bergylta
ENSUAMG00000026385	RIF1	82	62.757	ENSLACG00000005425	RIF1	78	62.757	Latimeria_chalumnae
ENSUAMG00000026385	RIF1	72	52.117	ENSLOCG00000002657	rif1	74	53.094	Lepisosteus_oculatus
ENSUAMG00000026385	RIF1	99	77.579	ENSLAFG00000009796	RIF1	90	77.579	Loxodonta_africana
ENSUAMG00000026385	RIF1	99	79.393	ENSMFAG00000032233	RIF1	90	79.393	Macaca_fascicularis
ENSUAMG00000026385	RIF1	99	79.438	ENSMMUG00000008611	RIF1	90	79.438	Macaca_mulatta
ENSUAMG00000026385	RIF1	99	79.393	ENSMNEG00000031616	RIF1	90	79.393	Macaca_nemestrina
ENSUAMG00000026385	RIF1	99	79.572	ENSMLEG00000042945	RIF1	90	79.572	Mandrillus_leucophaeus
ENSUAMG00000026385	RIF1	59	50.000	ENSMAMG00000001745	rif1	54	50.000	Mastacembelus_armatus
ENSUAMG00000026385	RIF1	83	39.099	ENSMZEG00005020920	rif1	70	48.876	Maylandia_zebra
ENSUAMG00000026385	RIF1	82	61.473	ENSMGAG00000012732	RIF1	82	61.756	Meleagris_gallopavo
ENSUAMG00000026385	RIF1	93	86.607	ENSMAUG00000013158	Rif1	88	86.607	Mesocricetus_auratus
ENSUAMG00000026385	RIF1	98	88.535	ENSMICG00000046127	RIF1	86	88.535	Microcebus_murinus
ENSUAMG00000026385	RIF1	99	68.843	ENSMOCG00000009381	Rif1	91	67.848	Microtus_ochrogaster
ENSUAMG00000026385	RIF1	58	50.161	ENSMMOG00000006519	rif1	54	50.161	Mola_mola
ENSUAMG00000026385	RIF1	99	58.730	ENSMODG00000003703	RIF1	90	58.862	Monodelphis_domestica
ENSUAMG00000026385	RIF1	59	46.687	ENSMALG00000016759	rif1	60	46.706	Monopterus_albus
ENSUAMG00000026385	RIF1	97	82.943	MGP_CAROLIEiJ_G0023555	Rif1	86	82.202	Mus_caroli
ENSUAMG00000026385	RIF1	99	67.892	ENSMUSG00000036202	Rif1	86	82.458	Mus_musculus
ENSUAMG00000026385	RIF1	97	77.465	MGP_PahariEiJ_G0025006	Rif1	86	77.465	Mus_pahari
ENSUAMG00000026385	RIF1	97	83.203	MGP_SPRETEiJ_G0024476	Rif1	86	82.861	Mus_spretus
ENSUAMG00000026385	RIF1	98	95.006	ENSMPUG00000000371	RIF1	86	95.006	Mustela_putorius_furo
ENSUAMG00000026385	RIF1	97	90.980	ENSMLUG00000003376	RIF1	95	90.980	Myotis_lucifugus
ENSUAMG00000026385	RIF1	99	71.505	ENSNGAG00000009268	Rif1	90	71.594	Nannospalax_galili
ENSUAMG00000026385	RIF1	70	48.214	ENSNBRG00000014257	rif1	70	47.587	Neolamprologus_brichardi
ENSUAMG00000026385	RIF1	97	89.258	ENSNLEG00000010955	RIF1	86	89.258	Nomascus_leucogenys
ENSUAMG00000026385	RIF1	81	73.077	ENSMEUG00000007601	-	81	72.558	Notamacropus_eugenii
ENSUAMG00000026385	RIF1	99	71.390	ENSODEG00000003950	RIF1	89	71.660	Octodon_degus
ENSUAMG00000026385	RIF1	63	51.252	ENSONIG00000013657	rif1	60	47.723	Oreochromis_niloticus
ENSUAMG00000026385	RIF1	77	74.620	ENSOANG00000006078	-	74	74.620	Ornithorhynchus_anatinus
ENSUAMG00000026385	RIF1	99	76.037	ENSOCUG00000017435	RIF1	86	86.428	Oryctolagus_cuniculus
ENSUAMG00000026385	RIF1	59	46.289	ENSORLG00020001302	rif1	58	46.302	Oryzias_latipes_hni
ENSUAMG00000026385	RIF1	59	46.206	ENSORLG00015000009	rif1	57	46.302	Oryzias_latipes_hsok
ENSUAMG00000026385	RIF1	57	47.321	ENSOMEG00000021513	rif1	56	47.198	Oryzias_melastigma
ENSUAMG00000026385	RIF1	97	86.282	ENSOGAG00000006141	RIF1	86	86.282	Otolemur_garnettii
ENSUAMG00000026385	RIF1	97	89.770	ENSOARG00000008930	RIF1	86	89.770	Ovis_aries
ENSUAMG00000026385	RIF1	97	89.258	ENSPPAG00000023754	RIF1	90	79.412	Pan_paniscus
ENSUAMG00000026385	RIF1	97	94.344	ENSPPRG00000003618	RIF1	86	94.344	Panthera_pardus
ENSUAMG00000026385	RIF1	97	94.473	ENSPTIG00000020652	RIF1	86	94.473	Panthera_tigris_altaica
ENSUAMG00000026385	RIF1	97	89.386	ENSPTRG00000012534	RIF1	86	89.386	Pan_troglodytes
ENSUAMG00000026385	RIF1	99	79.349	ENSPANG00000008525	RIF1	90	79.349	Papio_anubis
ENSUAMG00000026385	RIF1	59	52.410	ENSPKIG00000004267	rif1	57	52.410	Paramormyrops_kingsleyae
ENSUAMG00000026385	RIF1	61	42.634	ENSPMGG00000016141	rif1	66	42.179	Periophthalmus_magnuspinnatus
ENSUAMG00000026385	RIF1	99	69.679	ENSPEMG00000000446	Rif1	91	69.724	Peromyscus_maniculatus_bairdii
ENSUAMG00000026385	RIF1	99	57.667	ENSPCIG00000009185	RIF1	90	58.112	Phascolarctos_cinereus
ENSUAMG00000026385	RIF1	59	49.402	ENSPFOG00000000554	-	61	49.254	Poecilia_formosa
ENSUAMG00000026385	RIF1	59	49.057	ENSPFOG00000017804	rif1	56	49.008	Poecilia_formosa
ENSUAMG00000026385	RIF1	59	49.254	ENSPLAG00000017945	rif1	58	49.254	Poecilia_latipinna
ENSUAMG00000026385	RIF1	59	49.102	ENSPREG00000018052	rif1	55	52.656	Poecilia_reticulata
ENSUAMG00000026385	RIF1	99	79.501	ENSPPYG00000012846	RIF1	90	79.545	Pongo_abelii
ENSUAMG00000026385	RIF1	80	95.652	ENSPCAG00000009032	RIF1	72	95.652	Procavia_capensis
ENSUAMG00000026385	RIF1	99	81.320	ENSPCOG00000027888	RIF1	90	81.587	Propithecus_coquereli
ENSUAMG00000026385	RIF1	92	87.352	ENSPVAG00000014276	RIF1	85	88.211	Pteropus_vampyrus
ENSUAMG00000026385	RIF1	71	47.840	ENSPNYG00000012940	rif1	58	46.667	Pundamilia_nyererei
ENSUAMG00000026385	RIF1	99	66.459	ENSRNOG00000054901	Rif1	90	66.459	Rattus_norvegicus
ENSUAMG00000026385	RIF1	99	78.635	ENSRBIG00000003704	RIF1	90	78.680	Rhinopithecus_bieti
ENSUAMG00000026385	RIF1	99	79.661	ENSRROG00000028206	RIF1	90	79.661	Rhinopithecus_roxellana
ENSUAMG00000026385	RIF1	99	77.966	ENSSBOG00000029530	RIF1	89	87.484	Saimiri_boliviensis_boliviensis
ENSUAMG00000026385	RIF1	99	58.437	ENSSHAG00000018552	RIF1	97	58.393	Sarcophilus_harrisii
ENSUAMG00000026385	RIF1	58	51.497	ENSSFOG00015021539	rif1	58	51.497	Scleropages_formosus
ENSUAMG00000026385	RIF1	62	47.399	ENSSMAG00000011704	rif1	59	47.288	Scophthalmus_maximus
ENSUAMG00000026385	RIF1	70	48.751	ENSSDUG00000015632	rif1	71	48.058	Seriola_dumerili
ENSUAMG00000026385	RIF1	59	83.729	ENSSARG00000007161	-	53	83.729	Sorex_araneus
ENSUAMG00000026385	RIF1	88	71.257	ENSSPUG00000003062	RIF1	87	71.257	Sphenodon_punctatus
ENSUAMG00000026385	RIF1	97	90.385	ENSSSCG00000016395	RIF1	86	90.385	Sus_scrofa
ENSUAMG00000026385	RIF1	59	47.933	ENSTRUG00000015808	rif1	59	47.933	Takifugu_rubripes
ENSUAMG00000026385	RIF1	59	51.515	ENSTNIG00000011538	rif1	58	51.515	Tetraodon_nigroviridis
ENSUAMG00000026385	RIF1	80	89.873	ENSTBEG00000016082	RIF1	72	89.873	Tupaia_belangeri
ENSUAMG00000026385	RIF1	97	89.629	ENSTTRG00000011190	RIF1	86	89.629	Tursiops_truncatus
ENSUAMG00000026385	RIF1	99	99.192	ENSUMAG00000000337	RIF1	90	99.192	Ursus_maritimus
ENSUAMG00000026385	RIF1	99	80.340	ENSVPAG00000002162	RIF1	90	80.500	Vicugna_pacos
ENSUAMG00000026385	RIF1	99	87.829	ENSVVUG00000011293	RIF1	90	87.829	Vulpes_vulpes
ENSUAMG00000026385	RIF1	81	61.934	ENSXETG00000004530	rif1	74	61.934	Xenopus_tropicalis
ENSUAMG00000026385	RIF1	58	45.970	ENSXMAG00000000506	rif1	54	45.911	Xiphophorus_maculatus