EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000026605 (Gene tree)
Gene ID: -
Gene Symbol: CSTF2
Alias: CstF-64
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 20520 bases
Position: chrLZNR01001888.1:20259-40778
Accession: 2484
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000035067	RRM_1	PF00076.22	1.9e-25	1	1
ENSUAMP00000035066	RRM_1	PF00076.22	1.9e-25	1	1
ENSUAMP00000035064	RRM_1	PF00076.22	2.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000039041	CSTF2-202	1809	-	ENSUAMP00000035066	602 (aa)	-	-
ENSUAMT00000039039	CSTF2-201	1896	-	ENSUAMP00000035064	631 (aa)	-	-
ENSUAMT00000039042	CSTF2-203	1749	-	ENSUAMP00000035067	582 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000026605's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000026605's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000026605	CSTF2	100	96.346	ENSG00000101811	CSTF2	100	96.346	Homo_sapiens
ENSUAMG00000026605	CSTF2	86	83.197	ENSAPOG00000005630	cstf2	97	75.172	Acanthochromis_polyacanthus
ENSUAMG00000026605	CSTF2	100	99.007	ENSAMEG00000002082	CSTF2	100	99.007	Ailuropoda_melanoleuca
ENSUAMG00000026605	CSTF2	84	83.058	ENSACIG00000012852	cstf2	96	74.823	Amphilophus_citrinellus
ENSUAMG00000026605	CSTF2	86	81.557	ENSAOCG00000020905	cstf2	96	77.206	Amphiprion_ocellaris
ENSUAMG00000026605	CSTF2	86	81.557	ENSAPEG00000006526	cstf2	96	77.206	Amphiprion_percula
ENSUAMG00000026605	CSTF2	80	80.247	ENSATEG00000018186	cstf2	96	77.007	Anabas_testudineus
ENSUAMG00000026605	CSTF2	97	78.620	ENSAPLG00000007255	CSTF2	98	78.333	Anas_platyrhynchos
ENSUAMG00000026605	CSTF2	100	95.246	ENSANAG00000022342	CSTF2	100	95.246	Aotus_nancymaae
ENSUAMG00000026605	CSTF2	94	65.707	ENSACLG00000000779	cstf2	93	78.229	Astatotilapia_calliptera
ENSUAMG00000026605	CSTF2	86	84.977	ENSAMXG00000021477	cstf2	96	98.413	Astyanax_mexicanus
ENSUAMG00000026605	CSTF2	100	95.876	ENSBTAG00000003547	CSTF2	100	95.876	Bos_taurus
ENSUAMG00000026605	CSTF2	100	95.515	ENSCJAG00000004422	CSTF2	100	96.970	Callithrix_jacchus
ENSUAMG00000026605	CSTF2	100	97.766	ENSCAFG00000017551	CSTF2	100	97.766	Canis_familiaris
ENSUAMG00000026605	CSTF2	100	97.940	ENSCAFG00020007619	CSTF2	100	97.940	Canis_lupus_dingo
ENSUAMG00000026605	CSTF2	100	95.876	ENSCHIG00000016994	CSTF2	100	95.876	Capra_hircus
ENSUAMG00000026605	CSTF2	100	96.346	ENSTSYG00000006529	CSTF2	100	96.346	Carlito_syrichta
ENSUAMG00000026605	CSTF2	100	94.850	ENSCPOG00000015255	CSTF2	100	94.850	Cavia_porcellus
ENSUAMG00000026605	CSTF2	100	95.515	ENSCCAG00000032975	CSTF2	100	95.515	Cebus_capucinus
ENSUAMG00000026605	CSTF2	100	96.179	ENSCATG00000022835	CSTF2	100	96.179	Cercocebus_atys
ENSUAMG00000026605	CSTF2	100	94.850	ENSCLAG00000001904	CSTF2	100	94.850	Chinchilla_lanigera
ENSUAMG00000026605	CSTF2	100	96.346	ENSCSAG00000010360	CSTF2	100	96.346	Chlorocebus_sabaeus
ENSUAMG00000026605	CSTF2	68	100.000	ENSCHOG00000012803	CSTF2	75	100.000	Choloepus_hoffmanni
ENSUAMG00000026605	CSTF2	100	77.294	ENSCPBG00000014293	CSTF2	100	77.042	Chrysemys_picta_bellii
ENSUAMG00000026605	CSTF2	100	96.346	ENSCANG00000030612	CSTF2	100	96.346	Colobus_angolensis_palliatus
ENSUAMG00000026605	CSTF2	100	91.795	ENSCGRG00001023023	Cstf2	100	91.795	Cricetulus_griseus_chok1gshd
ENSUAMG00000026605	CSTF2	100	88.376	ENSCGRG00000003897	Cstf2	100	88.376	Cricetulus_griseus_crigri
ENSUAMG00000026605	CSTF2	87	82.988	ENSCVAG00000005731	cstf2	96	77.122	Cyprinodon_variegatus
ENSUAMG00000026605	CSTF2	74	98.182	ENSDARG00000090788	cstf2	93	92.188	Danio_rerio
ENSUAMG00000026605	CSTF2	100	90.411	ENSDORG00000007195	Cstf2	100	90.411	Dipodomys_ordii
ENSUAMG00000026605	CSTF2	74	94.595	ENSETEG00000004931	CSTF2	68	94.595	Echinops_telfairi
ENSUAMG00000026605	CSTF2	100	97.010	ENSEASG00005001216	CSTF2	100	97.010	Equus_asinus_asinus
ENSUAMG00000026605	CSTF2	100	97.010	ENSECAG00000009325	CSTF2	100	97.010	Equus_caballus
ENSUAMG00000026605	CSTF2	100	98.007	ENSFCAG00000007000	CSTF2	100	98.007	Felis_catus
ENSUAMG00000026605	CSTF2	93	76.348	ENSFALG00000003859	CSTF2	100	76.696	Ficedula_albicollis
ENSUAMG00000026605	CSTF2	100	95.246	ENSFDAG00000002416	CSTF2	100	95.246	Fukomys_damarensis
ENSUAMG00000026605	CSTF2	87	80.913	ENSFHEG00000017065	cstf2	91	73.180	Fundulus_heteroclitus
ENSUAMG00000026605	CSTF2	99	58.581	ENSGMOG00000005145	cstf2	99	56.239	Gadus_morhua
ENSUAMG00000026605	CSTF2	100	78.849	ENSGALG00000006760	CSTF2	100	84.333	Gallus_gallus
ENSUAMG00000026605	CSTF2	88	79.920	ENSGAFG00000020027	cstf2	96	58.904	Gambusia_affinis
ENSUAMG00000026605	CSTF2	99	56.871	ENSGACG00000017326	cstf2	93	81.633	Gasterosteus_aculeatus
ENSUAMG00000026605	CSTF2	100	78.673	ENSGAGG00000006037	CSTF2	100	79.305	Gopherus_agassizii
ENSUAMG00000026605	CSTF2	100	96.346	ENSGGOG00000022267	CSTF2	100	96.346	Gorilla_gorilla
ENSUAMG00000026605	CSTF2	94	65.083	ENSHBUG00000016183	cstf2	93	77.091	Haplochromis_burtoni
ENSUAMG00000026605	CSTF2	100	95.189	ENSHGLG00000000659	-	100	95.189	Heterocephalus_glaber_female
ENSUAMG00000026605	CSTF2	100	80.412	ENSHGLG00000013455	-	100	80.412	Heterocephalus_glaber_female
ENSUAMG00000026605	CSTF2	100	80.584	ENSHGLG00100015391	-	100	80.584	Heterocephalus_glaber_male
ENSUAMG00000026605	CSTF2	100	95.189	ENSHGLG00100001130	-	100	95.189	Heterocephalus_glaber_male
ENSUAMG00000026605	CSTF2	84	82.041	ENSHCOG00000005157	cstf2	97	75.874	Hippocampus_comes
ENSUAMG00000026605	CSTF2	91	66.890	ENSIPUG00000017839	cstf2	99	58.785	Ictalurus_punctatus
ENSUAMG00000026605	CSTF2	100	94.845	ENSSTOG00000023445	CSTF2	100	94.845	Ictidomys_tridecemlineatus
ENSUAMG00000026605	CSTF2	100	93.299	ENSJJAG00000020507	Cstf2	100	93.299	Jaculus_jaculus
ENSUAMG00000026605	CSTF2	84	80.658	ENSKMAG00000001068	cstf2	96	59.315	Kryptolebias_marmoratus
ENSUAMG00000026605	CSTF2	54	94.915	ENSLBEG00000028720	cstf2	82	94.915	Labrus_bergylta
ENSUAMG00000026605	CSTF2	99	64.907	ENSLACG00000015927	CSTF2	99	66.613	Latimeria_chalumnae
ENSUAMG00000026605	CSTF2	98	77.778	ENSLOCG00000015300	cstf2	93	65.358	Lepisosteus_oculatus
ENSUAMG00000026605	CSTF2	100	92.525	ENSLAFG00000000474	CSTF2	100	92.525	Loxodonta_africana
ENSUAMG00000026605	CSTF2	100	96.346	ENSMFAG00000043888	CSTF2	100	96.346	Macaca_fascicularis
ENSUAMG00000026605	CSTF2	100	95.515	ENSMMUG00000013008	CSTF2	100	95.515	Macaca_mulatta
ENSUAMG00000026605	CSTF2	100	96.346	ENSMNEG00000041824	CSTF2	100	96.346	Macaca_nemestrina
ENSUAMG00000026605	CSTF2	100	96.346	ENSMLEG00000036870	CSTF2	100	96.346	Mandrillus_leucophaeus
ENSUAMG00000026605	CSTF2	82	79.828	ENSMAMG00000020364	cstf2	96	74.427	Mastacembelus_armatus
ENSUAMG00000026605	CSTF2	94	65.707	ENSMZEG00005007200	cstf2	96	78.229	Maylandia_zebra
ENSUAMG00000026605	CSTF2	93	69.616	ENSMGAG00000004139	CSTF2	100	83.665	Meleagris_gallopavo
ENSUAMG00000026605	CSTF2	100	91.966	ENSMAUG00000000965	Cstf2	100	91.966	Mesocricetus_auratus
ENSUAMG00000026605	CSTF2	100	95.246	ENSMICG00000014121	CSTF2	100	95.246	Microcebus_murinus
ENSUAMG00000026605	CSTF2	100	90.598	ENSMOCG00000008081	Cstf2	100	90.598	Microtus_ochrogaster
ENSUAMG00000026605	CSTF2	84	92.308	ENSMMOG00000000538	cstf2	96	54.655	Mola_mola
ENSUAMG00000026605	CSTF2	100	79.575	ENSMODG00000011785	CSTF2	100	82.324	Monodelphis_domestica
ENSUAMG00000026605	CSTF2	100	92.587	MGP_CAROLIEiJ_G0033383	Cstf2	100	92.587	Mus_caroli
ENSUAMG00000026605	CSTF2	100	92.137	ENSMUSG00000031256	Cstf2	100	92.137	Mus_musculus
ENSUAMG00000026605	CSTF2	100	92.575	MGP_PahariEiJ_G0031923	Cstf2	100	92.733	Mus_pahari
ENSUAMG00000026605	CSTF2	100	92.587	MGP_SPRETEiJ_G0034548	Cstf2	100	92.587	Mus_spretus
ENSUAMG00000026605	CSTF2	100	98.732	ENSMPUG00000002339	CSTF2	100	98.732	Mustela_putorius_furo
ENSUAMG00000026605	CSTF2	100	94.479	ENSMLUG00000004598	CSTF2	98	94.479	Myotis_lucifugus
ENSUAMG00000026605	CSTF2	100	92.979	ENSNGAG00000021985	Cstf2	100	93.151	Nannospalax_galili
ENSUAMG00000026605	CSTF2	91	63.054	ENSNBRG00000021694	cstf2	100	55.148	Neolamprologus_brichardi
ENSUAMG00000026605	CSTF2	100	96.346	ENSNLEG00000007510	CSTF2	100	96.346	Nomascus_leucogenys
ENSUAMG00000026605	CSTF2	91	78.154	ENSMEUG00000014025	-	100	80.414	Notamacropus_eugenii
ENSUAMG00000026605	CSTF2	100	81.443	ENSMEUG00000011186	-	100	84.192	Notamacropus_eugenii
ENSUAMG00000026605	CSTF2	100	77.663	ENSMEUG00000007875	-	100	79.038	Notamacropus_eugenii
ENSUAMG00000026605	CSTF2	87	80.995	ENSOPRG00000003106	CSTF2	87	80.995	Ochotona_princeps
ENSUAMG00000026605	CSTF2	100	93.986	ENSODEG00000002059	CSTF2	100	93.986	Octodon_degus
ENSUAMG00000026605	CSTF2	99	56.569	ENSONIG00000002631	cstf2	99	58.552	Oreochromis_niloticus
ENSUAMG00000026605	CSTF2	94	98.214	ENSOANG00000004208	CSTF2	87	91.429	Ornithorhynchus_anatinus
ENSUAMG00000026605	CSTF2	100	93.471	ENSOCUG00000010468	CSTF2	100	93.471	Oryctolagus_cuniculus
ENSUAMG00000026605	CSTF2	86	80.498	ENSORLG00000001380	cstf2	97	57.458	Oryzias_latipes
ENSUAMG00000026605	CSTF2	86	80.913	ENSORLG00020021917	cstf2	97	57.699	Oryzias_latipes_hni
ENSUAMG00000026605	CSTF2	86	80.498	ENSORLG00015011996	cstf2	97	57.458	Oryzias_latipes_hsok
ENSUAMG00000026605	CSTF2	79	81.328	ENSOMEG00000015507	cstf2	97	73.196	Oryzias_melastigma
ENSUAMG00000026605	CSTF2	100	94.637	ENSOGAG00000011192	CSTF2	100	94.479	Otolemur_garnettii
ENSUAMG00000026605	CSTF2	100	95.876	ENSOARG00000001022	CSTF2	100	95.876	Ovis_aries
ENSUAMG00000026605	CSTF2	100	96.346	ENSPPAG00000031804	CSTF2	100	96.346	Pan_paniscus
ENSUAMG00000026605	CSTF2	100	98.173	ENSPPRG00000022492	CSTF2	100	98.173	Panthera_pardus
ENSUAMG00000026605	CSTF2	100	97.841	ENSPTIG00000009922	CSTF2	100	97.841	Panthera_tigris_altaica
ENSUAMG00000026605	CSTF2	100	96.346	ENSPTRG00000022090	CSTF2	100	96.346	Pan_troglodytes
ENSUAMG00000026605	CSTF2	100	96.513	ENSPANG00000002303	CSTF2	100	96.513	Papio_anubis
ENSUAMG00000026605	CSTF2	99	61.589	ENSPKIG00000005033	cstf2	97	60.137	Paramormyrops_kingsleyae
ENSUAMG00000026605	CSTF2	84	81.743	ENSPMGG00000006534	cstf2	97	73.611	Periophthalmus_magnuspinnatus
ENSUAMG00000026605	CSTF2	100	91.111	ENSPEMG00000019415	Cstf2	100	91.111	Peromyscus_maniculatus_bairdii
ENSUAMG00000026605	CSTF2	100	80.456	ENSPCIG00000002989	CSTF2	100	82.410	Phascolarctos_cinereus
ENSUAMG00000026605	CSTF2	62	80.321	ENSPLAG00000011176	cstf2	96	77.407	Poecilia_latipinna
ENSUAMG00000026605	CSTF2	62	80.321	ENSPMEG00000017743	cstf2	96	76.000	Poecilia_mexicana
ENSUAMG00000026605	CSTF2	81	62.500	ENSPREG00000011481	cstf2	97	59.966	Poecilia_reticulata
ENSUAMG00000026605	CSTF2	100	96.512	ENSPPYG00000020541	CSTF2	100	96.512	Pongo_abelii
ENSUAMG00000026605	CSTF2	100	95.681	ENSPCOG00000027744	CSTF2	100	95.681	Propithecus_coquereli
ENSUAMG00000026605	CSTF2	97	81.673	ENSPVAG00000008342	CSTF2	100	81.673	Pteropus_vampyrus
ENSUAMG00000026605	CSTF2	66	81.707	ENSPNYG00000010852	cstf2	94	91.781	Pundamilia_nyererei
ENSUAMG00000026605	CSTF2	94	65.880	ENSPNAG00000018887	cstf2	97	59.235	Pygocentrus_nattereri
ENSUAMG00000026605	CSTF2	100	91.453	ENSRNOG00000048025	Cstf2	100	91.453	Rattus_norvegicus
ENSUAMG00000026605	CSTF2	100	94.674	ENSRBIG00000030745	CSTF2	100	94.674	Rhinopithecus_bieti
ENSUAMG00000026605	CSTF2	100	96.346	ENSRROG00000045042	CSTF2	100	96.346	Rhinopithecus_roxellana
ENSUAMG00000026605	CSTF2	100	95.721	ENSSBOG00000021649	CSTF2	100	95.721	Saimiri_boliviensis_boliviensis
ENSUAMG00000026605	CSTF2	96	100.000	ENSSHAG00000003681	CSTF2	92	83.106	Sarcophilus_harrisii
ENSUAMG00000026605	CSTF2	99	63.201	ENSSFOG00015006348	cstf2	98	63.201	Scleropages_formosus
ENSUAMG00000026605	CSTF2	86	83.402	ENSSMAG00000013463	cstf2	96	59.014	Scophthalmus_maximus
ENSUAMG00000026605	CSTF2	100	66.438	ENSSPUG00000005288	-	100	85.522	Sphenodon_punctatus
ENSUAMG00000026605	CSTF2	100	96.346	ENSSSCG00000012486	CSTF2	100	97.306	Sus_scrofa
ENSUAMG00000026605	CSTF2	100	79.089	ENSTGUG00000002253	CSTF2	100	79.427	Taeniopygia_guttata
ENSUAMG00000026605	CSTF2	99	58.655	ENSTNIG00000016860	cstf2	99	58.992	Tetraodon_nigroviridis
ENSUAMG00000026605	CSTF2	56	100.000	ENSTBEG00000010029	-	69	100.000	Tupaia_belangeri
ENSUAMG00000026605	CSTF2	100	97.251	ENSTTRG00000013556	CSTF2	100	97.251	Tursiops_truncatus
ENSUAMG00000026605	CSTF2	100	91.601	ENSUMAG00000012417	CSTF2	100	100.000	Ursus_maritimus
ENSUAMG00000026605	CSTF2	72	96.793	ENSVPAG00000006466	CSTF2	72	96.793	Vicugna_pacos
ENSUAMG00000026605	CSTF2	100	97.938	ENSVVUG00000004717	CSTF2	100	97.938	Vulpes_vulpes
ENSUAMG00000026605	CSTF2	83	87.143	ENSXETG00000009642	cstf2	87	87.143	Xenopus_tropicalis
ENSUAMG00000026605	CSTF2	86	76.707	ENSXCOG00000016436	cstf2	84	96.970	Xiphophorus_couchianus
ENSUAMG00000026605	CSTF2	82	62.500	ENSXMAG00000013524	cstf2	96	77.037	Xiphophorus_maculatus