EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000026758 (Gene tree)
Gene ID: -
Gene Symbol: SFPQ
Alias: PPP1R140|PSF
Full Name: splicing factor proline and glutamine rich
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 8417 bases
Position: chrLZNR01007701.1:4473-12889
Accession: 10774
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000035259	RRM_1	PF00076.22	9.1e-31	1	2
ENSUAMP00000035259	RRM_1	PF00076.22	9.1e-31	2	2
ENSUAMP00000035276	RRM_1	PF00076.22	9.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000039247	SFPQ-201	1221	-	ENSUAMP00000035259	406 (aa)	-	-
ENSUAMT00000039264	SFPQ-202	474	-	ENSUAMP00000035276	157 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000026758's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000026758's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000026758	SFPQ	69	57.407	ENSUAMG00000008220	NONO	65	62.626
ENSUAMG00000026758	SFPQ	59	66.304	ENSUAMG00000012309	PSPC1	57	74.372
ENSUAMG00000026758	SFPQ	50	34.615	ENSUAMG00000014882	RBM4	77	32.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000026758	SFPQ	100	97.742	ENSG00000116560	SFPQ	77	85.294	Homo_sapiens
ENSUAMG00000026758	SFPQ	75	99.519	ENSAMEG00000000815	SFPQ	71	99.497	Ailuropoda_melanoleuca
ENSUAMG00000026758	SFPQ	53	79.412	ENSANAG00000037798	-	64	79.412	Aotus_nancymaae
ENSUAMG00000026758	SFPQ	92	93.137	ENSANAG00000027438	-	50	90.476	Aotus_nancymaae
ENSUAMG00000026758	SFPQ	53	99.138	ENSANAG00000021268	-	75	99.138	Aotus_nancymaae
ENSUAMG00000026758	SFPQ	100	98.382	ENSBTAG00000016328	SFPQ	59	98.382	Bos_taurus
ENSUAMG00000026758	SFPQ	100	97.419	ENSCJAG00000001431	SFPQ	59	97.419	Callithrix_jacchus
ENSUAMG00000026758	SFPQ	100	98.701	ENSCAFG00000003595	-	64	98.701	Canis_familiaris
ENSUAMG00000026758	SFPQ	50	100.000	ENSCAFG00020010702	-	63	100.000	Canis_lupus_dingo
ENSUAMG00000026758	SFPQ	100	98.382	ENSCHIG00000023097	SFPQ	58	98.382	Capra_hircus
ENSUAMG00000026758	SFPQ	53	99.160	ENSTSYG00000037120	-	63	99.160	Carlito_syrichta
ENSUAMG00000026758	SFPQ	52	93.939	ENSTSYG00000035106	-	60	91.919	Carlito_syrichta
ENSUAMG00000026758	SFPQ	53	99.160	ENSCPOG00000015018	-	64	99.160	Cavia_porcellus
ENSUAMG00000026758	SFPQ	100	97.143	ENSCCAG00000029361	-	77	97.097	Cebus_capucinus
ENSUAMG00000026758	SFPQ	53	99.160	ENSCLAG00000009583	-	63	99.160	Chinchilla_lanigera
ENSUAMG00000026758	SFPQ	100	97.742	ENSCSAG00000001082	SFPQ	59	97.742	Chlorocebus_sabaeus
ENSUAMG00000026758	SFPQ	61	99.324	ENSCHOG00000009131	SFPQ	66	99.324	Choloepus_hoffmanni
ENSUAMG00000026758	SFPQ	53	99.160	ENSCANG00000028087	-	63	99.160	Colobus_angolensis_palliatus
ENSUAMG00000026758	SFPQ	85	98.374	ENSCGRG00001011698	Sfpq	50	98.374	Cricetulus_griseus_chok1gshd
ENSUAMG00000026758	SFPQ	73	99.492	ENSCGRG00000010128	Sfpq	67	99.497	Cricetulus_griseus_crigri
ENSUAMG00000026758	SFPQ	75	81.068	ENSDARG00000011564	sfpq	100	83.478	Danio_rerio
ENSUAMG00000026758	SFPQ	100	98.052	ENSDNOG00000049454	SFPQ	58	98.052	Dasypus_novemcinctus
ENSUAMG00000026758	SFPQ	100	98.701	ENSDORG00000008109	Sfpq	59	98.701	Dipodomys_ordii
ENSUAMG00000026758	SFPQ	100	98.701	ENSEASG00005012012	SFPQ	58	98.701	Equus_asinus_asinus
ENSUAMG00000026758	SFPQ	100	98.701	ENSECAG00000000642	SFPQ	58	98.701	Equus_caballus
ENSUAMG00000026758	SFPQ	100	99.026	ENSFCAG00000042862	SFPQ	59	99.026	Felis_catus
ENSUAMG00000026758	SFPQ	53	97.479	ENSFALG00000000731	SFPQ	63	97.479	Ficedula_albicollis
ENSUAMG00000026758	SFPQ	53	99.160	ENSFDAG00000017723	-	65	99.160	Fukomys_damarensis
ENSUAMG00000026758	SFPQ	74	83.085	ENSGMOG00000011950	SFPQ	52	83.085	Gadus_morhua
ENSUAMG00000026758	SFPQ	74	99.020	ENSGGOG00000026354	SFPQ	63	99.160	Gorilla_gorilla
ENSUAMG00000026758	SFPQ	100	97.078	ENSHGLG00000012001	SFPQ	60	97.078	Heterocephalus_glaber_female
ENSUAMG00000026758	SFPQ	53	99.160	ENSHGLG00100004136	-	63	99.160	Heterocephalus_glaber_male
ENSUAMG00000026758	SFPQ	53	99.160	ENSSTOG00000014004	-	63	99.160	Ictidomys_tridecemlineatus
ENSUAMG00000026758	SFPQ	100	96.440	ENSJJAG00000015633	Sfpq	59	96.440	Jaculus_jaculus
ENSUAMG00000026758	SFPQ	86	98.413	ENSLAFG00000015951	SFPQ	51	99.545	Loxodonta_africana
ENSUAMG00000026758	SFPQ	100	97.419	ENSMFAG00000000797	SFPQ	59	97.419	Macaca_fascicularis
ENSUAMG00000026758	SFPQ	86	99.020	ENSMMUG00000019154	SFPQ	59	97.143	Macaca_mulatta
ENSUAMG00000026758	SFPQ	100	97.742	ENSMNEG00000038895	SFPQ	59	97.742	Macaca_nemestrina
ENSUAMG00000026758	SFPQ	53	99.020	ENSMLEG00000010643	-	62	99.020	Mandrillus_leucophaeus
ENSUAMG00000026758	SFPQ	61	97.973	ENSMGAG00000004237	SFPQ	67	97.973	Meleagris_gallopavo
ENSUAMG00000026758	SFPQ	85	98.374	ENSMAUG00000006402	Sfpq	50	98.374	Mesocricetus_auratus
ENSUAMG00000026758	SFPQ	100	98.387	ENSMICG00000027265	SFPQ	59	98.387	Microcebus_murinus
ENSUAMG00000026758	SFPQ	86	98.039	ENSMOCG00000019075	Sfpq	71	98.039	Microtus_ochrogaster
ENSUAMG00000026758	SFPQ	85	98.374	MGP_CAROLIEiJ_G0026487	Sfpq	50	98.374	Mus_caroli
ENSUAMG00000026758	SFPQ	85	98.374	ENSMUSG00000028820	Sfpq	50	98.374	Mus_musculus
ENSUAMG00000026758	SFPQ	100	98.039	MGP_PahariEiJ_G0028818	Sfpq	50	98.374	Mus_pahari
ENSUAMG00000026758	SFPQ	85	98.374	MGP_SPRETEiJ_G0027466	Sfpq	50	98.374	Mus_spretus
ENSUAMG00000026758	SFPQ	78	97.059	ENSMLUG00000027090	SFPQ	68	97.537	Myotis_lucifugus
ENSUAMG00000026758	SFPQ	53	99.160	ENSNLEG00000035521	-	63	99.160	Nomascus_leucogenys
ENSUAMG00000026758	SFPQ	89	100.000	ENSODEG00000005485	SFPQ	73	100.000	Octodon_degus
ENSUAMG00000026758	SFPQ	53	98.319	ENSOANG00000008789	-	63	98.319	Ornithorhynchus_anatinus
ENSUAMG00000026758	SFPQ	93	99.020	ENSOCUG00000001877	SFPQ	61	99.517	Oryctolagus_cuniculus
ENSUAMG00000026758	SFPQ	99	95.082	ENSOGAG00000027710	SFPQ	78	95.082	Otolemur_garnettii
ENSUAMG00000026758	SFPQ	53	99.160	ENSPPRG00000015478	-	63	99.160	Panthera_pardus
ENSUAMG00000026758	SFPQ	53	99.160	ENSPTIG00000007710	-	63	99.160	Panthera_tigris_altaica
ENSUAMG00000026758	SFPQ	86	99.020	ENSPTRG00000000518	SFPQ	57	97.143	Pan_troglodytes
ENSUAMG00000026758	SFPQ	92	98.556	ENSPANG00000005380	SFPQ	58	98.556	Papio_anubis
ENSUAMG00000026758	SFPQ	86	61.765	ENSPKIG00000023035	sfpq	51	87.374	Paramormyrops_kingsleyae
ENSUAMG00000026758	SFPQ	73	97.990	ENSPSIG00000011494	SFPQ	70	97.990	Pelodiscus_sinensis
ENSUAMG00000026758	SFPQ	83	98.039	ENSPEMG00000009794	Sfpq	70	98.039	Peromyscus_maniculatus_bairdii
ENSUAMG00000026758	SFPQ	100	97.742	ENSPPYG00000001560	SFPQ	59	97.742	Pongo_abelii
ENSUAMG00000026758	SFPQ	100	98.387	ENSPCOG00000027127	SFPQ	59	98.387	Propithecus_coquereli
ENSUAMG00000026758	SFPQ	86	97.059	ENSPVAG00000001865	SFPQ	59	95.238	Pteropus_vampyrus
ENSUAMG00000026758	SFPQ	85	98.374	ENSRNOG00000058461	Sfpq	50	98.374	Rattus_norvegicus
ENSUAMG00000026758	SFPQ	99	99.020	ENSRBIG00000035286	SFPQ	63	99.160	Rhinopithecus_bieti
ENSUAMG00000026758	SFPQ	79	99.554	ENSRROG00000040992	SFPQ	63	99.160	Rhinopithecus_roxellana
ENSUAMG00000026758	SFPQ	50	81.443	ENSSBOG00000033925	-	61	81.443	Saimiri_boliviensis_boliviensis
ENSUAMG00000026758	SFPQ	53	99.160	ENSSBOG00000024972	-	63	99.160	Saimiri_boliviensis_boliviensis
ENSUAMG00000026758	SFPQ	73	97.990	ENSSHAG00000016107	-	65	97.990	Sarcophilus_harrisii
ENSUAMG00000026758	SFPQ	53	98.319	ENSSHAG00000012312	-	59	98.319	Sarcophilus_harrisii
ENSUAMG00000026758	SFPQ	75	84.615	ENSSFOG00015009289	sfpq	52	84.615	Scleropages_formosus
ENSUAMG00000026758	SFPQ	58	99.265	ENSSARG00000006409	SFPQ	65	99.265	Sorex_araneus
ENSUAMG00000026758	SFPQ	100	98.377	ENSSSCG00000035690	SFPQ	60	98.377	Sus_scrofa
ENSUAMG00000026758	SFPQ	73	96.985	ENSTGUG00000001722	SFPQ	70	96.985	Taeniopygia_guttata
ENSUAMG00000026758	SFPQ	89	70.000	ENSTBEG00000006238	SFPQ	50	94.495	Tupaia_belangeri
ENSUAMG00000026758	SFPQ	97	100.000	ENSTTRG00000013930	SFPQ	55	100.000	Tursiops_truncatus
ENSUAMG00000026758	SFPQ	53	100.000	ENSUMAG00000008056	-	64	100.000	Ursus_maritimus
ENSUAMG00000026758	SFPQ	53	99.160	ENSVVUG00000000874	-	67	99.160	Vulpes_vulpes
ENSUAMG00000026758	SFPQ	79	81.057	ENSXETG00000009682	sfpq	55	87.562	Xenopus_tropicalis
ENSUAMG00000026758	SFPQ	75	58.779	ENSXCOG00000013414	-	67	79.787	Xiphophorus_couchianus