EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000026765 (Gene tree)
Gene ID: -
Gene Symbol: RRP1B
Alias: KIAA0179|Nnp1|PPP1R136|RRP1
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 25107 bases
Position: chrLZNR01006617.1:71308-96414
Accession: 23818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000035286	Nop52	PF05997.12	2.1e-71	1	1
ENSUAMP00000035285	Nop52	PF05997.12	2.2e-71	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000039276	RRP1B-202	2052	-	ENSUAMP00000035286	683 (aa)	-	-
ENSUAMT00000039275	RRP1B-201	2079	-	ENSUAMP00000035285	692 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000026765's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000026765's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000026765	RRP1B	100	68.021	ENSG00000160208	RRP1B	100	68.021	Homo_sapiens
ENSUAMG00000026765	RRP1B	71	48.485	ENSAPOG00000007490	-	50	49.219	Acanthochromis_polyacanthus
ENSUAMG00000026765	RRP1B	79	96.829	ENSAMEG00000011401	RRP1B	99	77.702	Ailuropoda_melanoleuca
ENSUAMG00000026765	RRP1B	51	53.143	ENSAMEG00000011448	RRP1	76	53.143	Ailuropoda_melanoleuca
ENSUAMG00000026765	RRP1B	72	51.351	ENSAOCG00000017894	-	95	54.000	Amphiprion_ocellaris
ENSUAMG00000026765	RRP1B	78	46.970	ENSAPEG00000024150	-	53	45.187	Amphiprion_percula
ENSUAMG00000026765	RRP1B	75	47.967	ENSATEG00000005045	-	51	47.967	Anabas_testudineus
ENSUAMG00000026765	RRP1B	94	58.859	ENSAPLG00000004310	RRP1B	70	58.859	Anas_platyrhynchos
ENSUAMG00000026765	RRP1B	75	60.156	ENSACAG00000017851	RRP1B	65	60.156	Anolis_carolinensis
ENSUAMG00000026765	RRP1B	100	67.801	ENSANAG00000034889	RRP1B	100	66.230	Aotus_nancymaae
ENSUAMG00000026765	RRP1B	57	50.126	ENSBTAG00000003981	RRP1	86	50.627	Bos_taurus
ENSUAMG00000026765	RRP1B	100	67.476	ENSBTAG00000017418	RRP1B	100	67.476	Bos_taurus
ENSUAMG00000026765	RRP1B	100	66.491	ENSCJAG00000017077	RRP1B	100	65.269	Callithrix_jacchus
ENSUAMG00000026765	RRP1B	55	51.330	ENSCJAG00000043205	RRP1	76	51.330	Callithrix_jacchus
ENSUAMG00000026765	RRP1B	94	79.137	ENSCAFG00000010621	RRP1B	99	79.424	Canis_familiaris
ENSUAMG00000026765	RRP1B	100	80.521	ENSCAFG00020018901	RRP1B	100	80.796	Canis_lupus_dingo
ENSUAMG00000026765	RRP1B	57	49.373	ENSCHIG00000020948	RRP1	86	49.875	Capra_hircus
ENSUAMG00000026765	RRP1B	100	67.027	ENSCHIG00000021519	RRP1B	100	67.930	Capra_hircus
ENSUAMG00000026765	RRP1B	100	58.687	ENSCPOG00000002396	RRP1B	100	58.719	Cavia_porcellus
ENSUAMG00000026765	RRP1B	62	49.409	ENSCCAG00000029828	RRP1	80	51.467	Cebus_capucinus
ENSUAMG00000026765	RRP1B	100	67.277	ENSCCAG00000029384	RRP1B	100	66.797	Cebus_capucinus
ENSUAMG00000026765	RRP1B	100	68.407	ENSCATG00000017423	RRP1B	100	67.974	Cercocebus_atys
ENSUAMG00000026765	RRP1B	100	60.830	ENSCLAG00000005622	RRP1B	100	60.673	Chinchilla_lanigera
ENSUAMG00000026765	RRP1B	62	45.833	ENSCLAG00000011639	RRP1	96	44.912	Chinchilla_lanigera
ENSUAMG00000026765	RRP1B	100	68.758	ENSCSAG00000007961	RRP1B	100	68.455	Chlorocebus_sabaeus
ENSUAMG00000026765	RRP1B	56	64.156	ENSCHOG00000002426	-	63	64.156	Choloepus_hoffmanni
ENSUAMG00000026765	RRP1B	99	49.344	ENSCPBG00000010310	RRP1B	78	59.950	Chrysemys_picta_bellii
ENSUAMG00000026765	RRP1B	58	34.080	ENSCING00000003304	-	71	35.503	Ciona_intestinalis
ENSUAMG00000026765	RRP1B	100	68.152	ENSCANG00000040952	RRP1B	100	67.192	Colobus_angolensis_palliatus
ENSUAMG00000026765	RRP1B	100	59.019	ENSCGRG00001023882	-	100	58.223	Cricetulus_griseus_chok1gshd
ENSUAMG00000026765	RRP1B	100	59.019	ENSCGRG00001010889	-	100	58.223	Cricetulus_griseus_chok1gshd
ENSUAMG00000026765	RRP1B	51	51.705	ENSCGRG00001011920	Rrp1	83	51.087	Cricetulus_griseus_chok1gshd
ENSUAMG00000026765	RRP1B	94	57.806	ENSCGRG00000001553	Rrp1b	97	56.882	Cricetulus_griseus_crigri
ENSUAMG00000026765	RRP1B	51	51.705	ENSCGRG00000008915	Rrp1	83	51.087	Cricetulus_griseus_crigri
ENSUAMG00000026765	RRP1B	66	50.515	ENSCSEG00000020711	-	79	51.579	Cynoglossus_semilaevis
ENSUAMG00000026765	RRP1B	53	41.287	ENSCVAG00000017568	-	93	42.667	Cyprinodon_variegatus
ENSUAMG00000026765	RRP1B	60	49.519	ENSDNOG00000019880	RRP1	82	52.394	Dasypus_novemcinctus
ENSUAMG00000026765	RRP1B	100	61.478	ENSDNOG00000032774	RRP1B	100	61.992	Dasypus_novemcinctus
ENSUAMG00000026765	RRP1B	93	55.286	ENSDORG00000005496	Rrp1b	100	56.776	Dipodomys_ordii
ENSUAMG00000026765	RRP1B	91	85.882	ENSETEG00000019489	RRP1B	90	85.882	Echinops_telfairi
ENSUAMG00000026765	RRP1B	55	49.867	ENSEASG00005001673	RRP1	83	50.933	Equus_asinus_asinus
ENSUAMG00000026765	RRP1B	100	70.449	ENSEASG00005001687	RRP1B	100	71.391	Equus_asinus_asinus
ENSUAMG00000026765	RRP1B	55	50.133	ENSECAG00000015703	RRP1	83	51.467	Equus_caballus
ENSUAMG00000026765	RRP1B	100	69.921	ENSECAG00000018018	RRP1B	100	70.866	Equus_caballus
ENSUAMG00000026765	RRP1B	70	51.613	ENSELUG00000015885	-	94	44.886	Esox_lucius
ENSUAMG00000026765	RRP1B	100	75.811	ENSFCAG00000010272	RRP1B	100	75.946	Felis_catus
ENSUAMG00000026765	RRP1B	55	51.058	ENSFCAG00000008434	RRP1	81	51.604	Felis_catus
ENSUAMG00000026765	RRP1B	91	43.865	ENSFALG00000002024	RRP1B	100	43.927	Ficedula_albicollis
ENSUAMG00000026765	RRP1B	96	60.740	ENSFDAG00000010899	RRP1B	96	60.740	Fukomys_damarensis
ENSUAMG00000026765	RRP1B	70	43.967	ENSFDAG00000013728	RRP1	91	45.622	Fukomys_damarensis
ENSUAMG00000026765	RRP1B	67	43.202	ENSFHEG00000016314	-	51	52.632	Fundulus_heteroclitus
ENSUAMG00000026765	RRP1B	69	45.872	ENSGMOG00000001953	-	69	45.455	Gadus_morhua
ENSUAMG00000026765	RRP1B	100	45.692	ENSGALG00000035696	RRP1B	86	54.884	Gallus_gallus
ENSUAMG00000026765	RRP1B	99	36.131	ENSGACG00000001438	rrp1	73	45.385	Gasterosteus_aculeatus
ENSUAMG00000026765	RRP1B	100	48.638	ENSGAGG00000000375	RRP1B	80	59.502	Gopherus_agassizii
ENSUAMG00000026765	RRP1B	100	68.021	ENSGGOG00000012069	RRP1B	100	68.021	Gorilla_gorilla
ENSUAMG00000026765	RRP1B	51	44.693	ENSHBUG00000003766	-	51	43.358	Haplochromis_burtoni
ENSUAMG00000026765	RRP1B	99	61.382	ENSHGLG00000004968	RRP1B	100	61.924	Heterocephalus_glaber_female
ENSUAMG00000026765	RRP1B	83	65.915	ENSHGLG00100002232	RRP1B	83	65.922	Heterocephalus_glaber_male
ENSUAMG00000026765	RRP1B	73	40.789	ENSHCOG00000018388	-	60	43.750	Hippocampus_comes
ENSUAMG00000026765	RRP1B	64	45.714	ENSIPUG00000000673	-	68	44.944	Ictalurus_punctatus
ENSUAMG00000026765	RRP1B	99	66.301	ENSSTOG00000011790	RRP1B	96	67.118	Ictidomys_tridecemlineatus
ENSUAMG00000026765	RRP1B	100	55.614	ENSJJAG00000021279	Rrp1b	100	55.232	Jaculus_jaculus
ENSUAMG00000026765	RRP1B	67	48.413	ENSKMAG00000005539	rrp1	100	35.626	Kryptolebias_marmoratus
ENSUAMG00000026765	RRP1B	51	41.530	ENSLBEG00000021417	RRP1	96	41.818	Labrus_bergylta
ENSUAMG00000026765	RRP1B	76	52.320	ENSLACG00000017332	-	72	52.320	Latimeria_chalumnae
ENSUAMG00000026765	RRP1B	70	51.181	ENSLOCG00000004064	-	100	37.798	Lepisosteus_oculatus
ENSUAMG00000026765	RRP1B	87	59.091	ENSLAFG00000000766	RRP1B	94	70.387	Loxodonta_africana
ENSUAMG00000026765	RRP1B	55	51.421	ENSLAFG00000022901	RRP1	84	51.421	Loxodonta_africana
ENSUAMG00000026765	RRP1B	69	46.985	ENSMFAG00000003202	RRP1	86	47.586	Macaca_fascicularis
ENSUAMG00000026765	RRP1B	100	68.799	ENSMFAG00000039152	RRP1B	100	68.497	Macaca_fascicularis
ENSUAMG00000026765	RRP1B	100	66.057	ENSMMUG00000000104	RRP1B	100	65.621	Macaca_mulatta
ENSUAMG00000026765	RRP1B	69	46.778	ENSMMUG00000012304	RRP1	80	51.596	Macaca_mulatta
ENSUAMG00000026765	RRP1B	100	68.538	ENSMNEG00000034269	RRP1B	100	68.235	Macaca_nemestrina
ENSUAMG00000026765	RRP1B	69	46.985	ENSMNEG00000031210	RRP1	80	51.596	Macaca_nemestrina
ENSUAMG00000026765	RRP1B	94	67.358	ENSMLEG00000040044	RRP1B	99	67.036	Mandrillus_leucophaeus
ENSUAMG00000026765	RRP1B	81	58.268	ENSMGAG00000014591	RRP1B	73	58.268	Meleagris_gallopavo
ENSUAMG00000026765	RRP1B	100	57.390	ENSMAUG00000021508	Rrp1b	100	58.099	Mesocricetus_auratus
ENSUAMG00000026765	RRP1B	51	39.945	ENSMAUG00000017653	Rrp1	81	41.019	Mesocricetus_auratus
ENSUAMG00000026765	RRP1B	100	70.850	ENSMICG00000004686	RRP1B	100	70.040	Microcebus_murinus
ENSUAMG00000026765	RRP1B	100	55.191	ENSMOCG00000001117	Rrp1b	100	57.048	Microtus_ochrogaster
ENSUAMG00000026765	RRP1B	53	37.705	ENSMMOG00000019175	rrp1	92	39.130	Mola_mola
ENSUAMG00000026765	RRP1B	100	61.075	ENSMODG00000021033	RRP1B	100	60.288	Monodelphis_domestica
ENSUAMG00000026765	RRP1B	50	56.609	ENSMODG00000021036	-	51	57.925	Monodelphis_domestica
ENSUAMG00000026765	RRP1B	55	45.312	ENSMALG00000010310	rrp1	97	45.312	Monopterus_albus
ENSUAMG00000026765	RRP1B	100	54.011	MGP_CAROLIEiJ_G0021376	Rrp1b	100	53.949	Mus_caroli
ENSUAMG00000026765	RRP1B	100	54.497	ENSMUSG00000058392	Rrp1b	100	54.362	Mus_musculus
ENSUAMG00000026765	RRP1B	100	56.393	MGP_PahariEiJ_G0023695	Rrp1b	100	56.258	Mus_pahari
ENSUAMG00000026765	RRP1B	100	56.284	MGP_SPRETEiJ_G0022290	Rrp1b	100	56.148	Mus_spretus
ENSUAMG00000026765	RRP1B	82	72.447	ENSMPUG00000009810	RRP1B	99	72.771	Mustela_putorius_furo
ENSUAMG00000026765	RRP1B	99	68.519	ENSMLUG00000007738	RRP1B	99	69.180	Myotis_lucifugus
ENSUAMG00000026765	RRP1B	59	44.639	ENSMLUG00000017788	RRP1	85	45.872	Myotis_lucifugus
ENSUAMG00000026765	RRP1B	100	58.322	ENSNGAG00000021073	Rrp1b	100	58.988	Nannospalax_galili
ENSUAMG00000026765	RRP1B	100	67.751	ENSNLEG00000001490	RRP1B	100	67.886	Nomascus_leucogenys
ENSUAMG00000026765	RRP1B	62	50.000	ENSNLEG00000034734	RRP1	80	51.596	Nomascus_leucogenys
ENSUAMG00000026765	RRP1B	58	87.395	ENSMEUG00000003226	-	62	87.395	Notamacropus_eugenii
ENSUAMG00000026765	RRP1B	100	58.287	ENSODEG00000013177	RRP1B	100	58.149	Octodon_degus
ENSUAMG00000026765	RRP1B	51	42.407	ENSONIG00000004264	rrp1	98	35.944	Oreochromis_niloticus
ENSUAMG00000026765	RRP1B	50	56.851	ENSOANG00000006472	-	99	52.279	Ornithorhynchus_anatinus
ENSUAMG00000026765	RRP1B	99	49.608	ENSOANG00000006470	RRP1B	99	51.697	Ornithorhynchus_anatinus
ENSUAMG00000026765	RRP1B	94	55.378	ENSOCUG00000025931	RRP1B	100	54.905	Oryctolagus_cuniculus
ENSUAMG00000026765	RRP1B	66	51.613	ENSORLG00020007199	-	56	51.613	Oryzias_latipes_hni
ENSUAMG00000026765	RRP1B	71	45.845	ENSORLG00015004425	-	56	46.381	Oryzias_latipes_hsok
ENSUAMG00000026765	RRP1B	65	55.556	ENSOMEG00000016910	-	56	55.556	Oryzias_melastigma
ENSUAMG00000026765	RRP1B	54	48.477	ENSOGAG00000006105	RRP1	83	49.742	Otolemur_garnettii
ENSUAMG00000026765	RRP1B	97	65.574	ENSOGAG00000009872	RRP1B	99	65.774	Otolemur_garnettii
ENSUAMG00000026765	RRP1B	94	64.993	ENSOARG00000011314	RRP1B	100	64.849	Ovis_aries
ENSUAMG00000026765	RRP1B	94	66.250	ENSPPAG00000035319	RRP1B	99	66.158	Pan_paniscus
ENSUAMG00000026765	RRP1B	52	51.934	ENSPPRG00000010656	RRP1	79	52.514	Panthera_pardus
ENSUAMG00000026765	RRP1B	100	75.337	ENSPPRG00000010356	RRP1B	100	75.472	Panthera_pardus
ENSUAMG00000026765	RRP1B	85	79.602	ENSPTIG00000016894	RRP1B	99	69.231	Panthera_tigris_altaica
ENSUAMG00000026765	RRP1B	100	67.890	ENSPTRG00000013958	RRP1B	100	67.890	Pan_troglodytes
ENSUAMG00000026765	RRP1B	100	68.799	ENSPANG00000011090	RRP1B	100	68.497	Papio_anubis
ENSUAMG00000026765	RRP1B	62	48.821	ENSPANG00000015097	RRP1	80	51.587	Papio_anubis
ENSUAMG00000026765	RRP1B	71	49.580	ENSPKIG00000003422	-	61	49.580	Paramormyrops_kingsleyae
ENSUAMG00000026765	RRP1B	86	63.288	ENSPSIG00000008152	RRP1B	79	62.532	Pelodiscus_sinensis
ENSUAMG00000026765	RRP1B	52	37.190	ENSPMGG00000007512	-	90	38.196	Periophthalmus_magnuspinnatus
ENSUAMG00000026765	RRP1B	100	58.879	ENSPEMG00000022490	Rrp1b	100	58.121	Peromyscus_maniculatus_bairdii
ENSUAMG00000026765	RRP1B	67	48.922	ENSPCIG00000015523	-	82	55.497	Phascolarctos_cinereus
ENSUAMG00000026765	RRP1B	100	60.938	ENSPCIG00000015513	RRP1B	100	60.602	Phascolarctos_cinereus
ENSUAMG00000026765	RRP1B	100	35.139	ENSPFOG00000007424	-	82	43.666	Poecilia_formosa
ENSUAMG00000026765	RRP1B	53	44.959	ENSPLAG00000016684	-	52	44.959	Poecilia_latipinna
ENSUAMG00000026765	RRP1B	72	44.414	ENSPMEG00000007042	-	78	44.414	Poecilia_mexicana
ENSUAMG00000026765	RRP1B	87	44.959	ENSPREG00000015673	-	78	44.565	Poecilia_reticulata
ENSUAMG00000026765	RRP1B	100	68.021	ENSPPYG00000011470	RRP1B	100	67.366	Pongo_abelii
ENSUAMG00000026765	RRP1B	62	49.417	ENSPPYG00000011474	RRP1	80	51.706	Pongo_abelii
ENSUAMG00000026765	RRP1B	84	84.211	ENSPCAG00000013723	RRP1B	91	84.211	Procavia_capensis
ENSUAMG00000026765	RRP1B	50	52.841	ENSPCOG00000017706	RRP1	82	50.919	Propithecus_coquereli
ENSUAMG00000026765	RRP1B	100	71.255	ENSPCOG00000017927	RRP1B	100	70.580	Propithecus_coquereli
ENSUAMG00000026765	RRP1B	64	68.707	ENSPVAG00000001436	RRP1B	99	60.658	Pteropus_vampyrus
ENSUAMG00000026765	RRP1B	100	57.754	ENSRNOG00000001194	Rrp1b	100	57.450	Rattus_norvegicus
ENSUAMG00000026765	RRP1B	62	49.764	ENSRBIG00000032082	RRP1	80	51.579	Rhinopithecus_bieti
ENSUAMG00000026765	RRP1B	100	63.874	ENSRBIG00000041689	RRP1B	100	62.895	Rhinopithecus_bieti
ENSUAMG00000026765	RRP1B	100	68.194	ENSRROG00000031499	RRP1B	100	67.237	Rhinopithecus_roxellana
ENSUAMG00000026765	RRP1B	94	63.503	ENSSBOG00000034727	RRP1B	99	62.400	Saimiri_boliviensis_boliviensis
ENSUAMG00000026765	RRP1B	55	50.402	ENSSBOG00000034689	RRP1	81	50.402	Saimiri_boliviensis_boliviensis
ENSUAMG00000026765	RRP1B	100	60.208	ENSSHAG00000017789	RRP1B	100	60.550	Sarcophilus_harrisii
ENSUAMG00000026765	RRP1B	73	48.739	ENSSFOG00015003932	-	63	45.000	Scleropages_formosus
ENSUAMG00000026765	RRP1B	71	46.875	ENSSMAG00000016847	-	88	44.595	Scophthalmus_maximus
ENSUAMG00000026765	RRP1B	73	46.269	ENSSDUG00000000551	-	59	45.038	Seriola_dumerili
ENSUAMG00000026765	RRP1B	73	46.269	ENSSLDG00000002538	-	55	45.641	Seriola_lalandi_dorsalis
ENSUAMG00000026765	RRP1B	78	64.085	ENSSARG00000003108	-	75	64.085	Sorex_araneus
ENSUAMG00000026765	RRP1B	71	48.031	ENSSPAG00000005370	-	52	48.031	Stegastes_partitus
ENSUAMG00000026765	RRP1B	100	63.279	ENSSSCG00000021698	RRP1B	100	63.179	Sus_scrofa
ENSUAMG00000026765	RRP1B	92	59.807	ENSTGUG00000005926	RRP1B	100	45.090	Taeniopygia_guttata
ENSUAMG00000026765	RRP1B	51	43.785	ENSTRUG00000017592	rrp1	99	43.785	Takifugu_rubripes
ENSUAMG00000026765	RRP1B	95	34.821	ENSTNIG00000005053	rrp1	70	48.889	Tetraodon_nigroviridis
ENSUAMG00000026765	RRP1B	94	61.069	ENSTBEG00000000422	RRP1B	100	81.065	Tupaia_belangeri
ENSUAMG00000026765	RRP1B	100	66.079	ENSTTRG00000000723	RRP1B	100	67.707	Tursiops_truncatus
ENSUAMG00000026765	RRP1B	78	96.011	ENSUMAG00000025510	RRP1B	98	96.011	Ursus_maritimus
ENSUAMG00000026765	RRP1B	94	79.598	ENSVVUG00000024509	RRP1B	99	79.885	Vulpes_vulpes
ENSUAMG00000026765	RRP1B	73	44.385	ENSXMAG00000023123	-	59	52.041	Xiphophorus_maculatus