EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000027335 (Gene tree)
Gene ID: -
Gene Symbol: DDX39B
Alias: BAT1|D6S81E|UAP56
Full Name: DExD-box helicase 39B
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 10381 bases
Position: chrLZNR01011857.1:33229-43609
Accession: 13917
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000036056	DEAD	PF00270.29	1e-25	1	1
ENSUAMP00000036058	DEAD	PF00270.29	1.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000040134	DDX39B-201	1239	-	ENSUAMP00000036056	412 (aa)	-	-
ENSUAMT00000040136	DDX39B-202	1191	-	ENSUAMP00000036058	396 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000027335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000027335's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000027335	DDX39B	80	31.700	ENSUAMG00000016382	DDX47	75	31.124
ENSUAMG00000027335	DDX39B	86	35.230	ENSUAMG00000015946	EIF4A2	90	34.959
ENSUAMG00000027335	DDX39B	90	31.078	ENSUAMG00000006974	-	85	30.576
ENSUAMG00000027335	DDX39B	100	79.535	ENSUAMG00000020022	DDX39A	100	79.535
ENSUAMG00000027335	DDX39B	92	33.333	ENSUAMG00000003583	EIF4A1	95	32.824
ENSUAMG00000027335	DDX39B	86	33.062	ENSUAMG00000027453	EIF4A3	89	32.791
ENSUAMG00000027335	DDX39B	90	30.827	ENSUAMG00000006969	DDX19A	87	30.326

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000027335	DDX39B	100	86.977	ENSG00000198563	DDX39B	100	99.200	Homo_sapiens
ENSUAMG00000027335	DDX39B	100	87.209	ENSAMEG00000009508	DDX39B	99	87.209	Ailuropoda_melanoleuca
ENSUAMG00000027335	DDX39B	99	80.886	ENSACIG00000004534	ddx39b	98	80.886	Amphilophus_citrinellus
ENSUAMG00000027335	DDX39B	100	80.876	ENSATEG00000012366	ddx39b	100	80.876	Anabas_testudineus
ENSUAMG00000027335	DDX39B	100	84.223	ENSACAG00000012240	DDX39B	100	84.223	Anolis_carolinensis
ENSUAMG00000027335	DDX39B	100	86.977	ENSANAG00000030372	DDX39B	100	86.977	Aotus_nancymaae
ENSUAMG00000027335	DDX39B	99	78.670	ENSACLG00000018759	ddx39b	99	78.670	Astatotilapia_calliptera
ENSUAMG00000027335	DDX39B	100	80.594	ENSAMXG00000017837	ddx39b	100	80.594	Astyanax_mexicanus
ENSUAMG00000027335	DDX39B	100	86.744	ENSBTAG00000014490	DDX39B	100	86.744	Bos_taurus
ENSUAMG00000027335	DDX39B	100	86.977	ENSCJAG00000003152	DDX39B	100	86.977	Callithrix_jacchus
ENSUAMG00000027335	DDX39B	100	86.977	ENSCAFG00000000509	DDX39B	100	86.977	Canis_familiaris
ENSUAMG00000027335	DDX39B	100	86.977	ENSCAFG00020020530	DDX39B	100	86.977	Canis_lupus_dingo
ENSUAMG00000027335	DDX39B	100	86.744	ENSCHIG00000004579	DDX39B	100	86.744	Capra_hircus
ENSUAMG00000027335	DDX39B	100	86.977	ENSTSYG00000010226	-	100	86.977	Carlito_syrichta
ENSUAMG00000027335	DDX39B	100	79.952	ENSTSYG00000029741	-	94	77.686	Carlito_syrichta
ENSUAMG00000027335	DDX39B	100	86.744	ENSCAPG00000010066	DDX39B	100	86.744	Cavia_aperea
ENSUAMG00000027335	DDX39B	100	86.744	ENSCPOG00000002335	DDX39B	100	86.744	Cavia_porcellus
ENSUAMG00000027335	DDX39B	100	86.977	ENSCCAG00000027897	DDX39B	100	86.977	Cebus_capucinus
ENSUAMG00000027335	DDX39B	99	78.689	ENSCATG00000043709	DDX39B	99	78.689	Cercocebus_atys
ENSUAMG00000027335	DDX39B	100	86.744	ENSCLAG00000014555	DDX39B	100	86.744	Chinchilla_lanigera
ENSUAMG00000027335	DDX39B	99	86.651	ENSCSAG00000008517	DDX39B	100	86.651	Chlorocebus_sabaeus
ENSUAMG00000027335	DDX39B	61	84.015	ENSCPBG00000014671	-	98	84.015	Chrysemys_picta_bellii
ENSUAMG00000027335	DDX39B	100	86.977	ENSCANG00000041217	DDX39B	100	86.977	Colobus_angolensis_palliatus
ENSUAMG00000027335	DDX39B	67	87.594	ENSCGRG00001017315	-	95	87.594	Cricetulus_griseus_chok1gshd
ENSUAMG00000027335	DDX39B	83	73.199	ENSCGRG00001021916	-	89	72.911	Cricetulus_griseus_chok1gshd
ENSUAMG00000027335	DDX39B	51	87.000	ENSCGRG00000000078	-	87	87.000	Cricetulus_griseus_crigri
ENSUAMG00000027335	DDX39B	79	83.591	ENSCGRG00000012479	-	100	83.591	Cricetulus_griseus_crigri
ENSUAMG00000027335	DDX39B	100	80.092	ENSDARG00000036069	ddx39b	100	80.320	Danio_rerio
ENSUAMG00000027335	DDX39B	100	86.977	ENSDNOG00000010215	DDX39B	100	86.977	Dasypus_novemcinctus
ENSUAMG00000027335	DDX39B	87	85.372	ENSDORG00000004985	Ddx39b	100	85.372	Dipodomys_ordii
ENSUAMG00000027335	DDX39B	87	79.255	ENSETEG00000009649	DDX39B	87	79.255	Echinops_telfairi
ENSUAMG00000027335	DDX39B	100	86.977	ENSEASG00005017156	DDX39B	100	86.977	Equus_asinus_asinus
ENSUAMG00000027335	DDX39B	100	86.977	ENSECAG00000007750	DDX39B	100	86.977	Equus_caballus
ENSUAMG00000027335	DDX39B	100	80.139	ENSELUG00000017904	ddx39b	100	80.139	Esox_lucius
ENSUAMG00000027335	DDX39B	100	87.209	ENSFCAG00000004497	DDX39B	100	87.209	Felis_catus
ENSUAMG00000027335	DDX39B	100	86.744	ENSFDAG00000011074	DDX39B	100	86.744	Fukomys_damarensis
ENSUAMG00000027335	DDX39B	73	82.390	ENSGAGG00000001300	-	80	82.390	Gopherus_agassizii
ENSUAMG00000027335	DDX39B	100	86.977	ENSGGOG00000005989	DDX39B	100	86.977	Gorilla_gorilla
ENSUAMG00000027335	DDX39B	52	76.056	ENSHBUG00000022054	-	79	76.056	Haplochromis_burtoni
ENSUAMG00000027335	DDX39B	100	86.279	ENSHGLG00000019248	DDX39B	100	86.279	Heterocephalus_glaber_female
ENSUAMG00000027335	DDX39B	100	86.279	ENSHGLG00100011850	DDX39B	100	86.279	Heterocephalus_glaber_male
ENSUAMG00000027335	DDX39B	100	79.680	ENSIPUG00000015733	DDX39B	94	80.137	Ictalurus_punctatus
ENSUAMG00000027335	DDX39B	100	86.512	ENSSTOG00000012838	DDX39B	100	86.512	Ictidomys_tridecemlineatus
ENSUAMG00000027335	DDX39B	100	86.279	ENSJJAG00000005660	-	100	86.279	Jaculus_jaculus
ENSUAMG00000027335	DDX39B	99	68.868	ENSLBEG00000012254	ddx39b	99	68.471	Labrus_bergylta
ENSUAMG00000027335	DDX39B	63	67.200	ENSLBEG00000017177	-	86	67.200	Labrus_bergylta
ENSUAMG00000027335	DDX39B	100	77.064	ENSLACG00000002110	DDX39B	100	77.064	Latimeria_chalumnae
ENSUAMG00000027335	DDX39B	100	87.179	ENSLAFG00000014202	DDX39B	100	87.179	Loxodonta_africana
ENSUAMG00000027335	DDX39B	100	86.977	ENSMFAG00000034233	DDX39B	100	86.977	Macaca_fascicularis
ENSUAMG00000027335	DDX39B	100	86.977	ENSMMUG00000008839	DDX39B	100	86.977	Macaca_mulatta
ENSUAMG00000027335	DDX39B	100	86.977	ENSMNEG00000041059	DDX39B	100	86.977	Macaca_nemestrina
ENSUAMG00000027335	DDX39B	100	86.977	ENSMLEG00000043791	DDX39B	100	86.977	Mandrillus_leucophaeus
ENSUAMG00000027335	DDX39B	99	78.670	ENSMZEG00005017654	ddx39b	99	78.670	Maylandia_zebra
ENSUAMG00000027335	DDX39B	100	86.279	ENSMAUG00000008059	Ddx39b	100	86.279	Mesocricetus_auratus
ENSUAMG00000027335	DDX39B	100	86.977	ENSMICG00000017349	DDX39B	100	86.977	Microcebus_murinus
ENSUAMG00000027335	DDX39B	100	86.512	ENSMOCG00000011169	Ddx39b	100	86.512	Microtus_ochrogaster
ENSUAMG00000027335	DDX39B	87	84.921	ENSMODG00000015791	DDX39B	88	84.921	Monodelphis_domestica
ENSUAMG00000027335	DDX39B	100	86.512	ENSMUSG00000019432	Ddx39b	100	86.512	Mus_musculus
ENSUAMG00000027335	DDX39B	100	86.512	MGP_PahariEiJ_G0020513	Ddx39b	100	86.512	Mus_pahari
ENSUAMG00000027335	DDX39B	100	86.512	MGP_SPRETEiJ_G0022424	Ddx39b	100	86.512	Mus_spretus
ENSUAMG00000027335	DDX39B	100	87.209	ENSMPUG00000011407	DDX39B	100	87.209	Mustela_putorius_furo
ENSUAMG00000027335	DDX39B	72	82.428	ENSMLUG00000001681	DDX39B	100	82.428	Myotis_lucifugus
ENSUAMG00000027335	DDX39B	100	86.977	ENSNGAG00000022948	Ddx39b	100	86.977	Nannospalax_galili
ENSUAMG00000027335	DDX39B	83	97.183	ENSNLEG00000006094	DDX39B	100	97.183	Nomascus_leucogenys
ENSUAMG00000027335	DDX39B	100	78.505	ENSMEUG00000008264	DDX39B	100	78.505	Notamacropus_eugenii
ENSUAMG00000027335	DDX39B	100	87.209	ENSOPRG00000011923	DDX39B	100	87.209	Ochotona_princeps
ENSUAMG00000027335	DDX39B	100	86.512	ENSODEG00000018083	DDX39B	100	86.512	Octodon_degus
ENSUAMG00000027335	DDX39B	100	80.184	ENSONIG00000004740	ddx39b	100	79.724	Oreochromis_niloticus
ENSUAMG00000027335	DDX39B	60	87.029	ENSOANG00000008361	DDX39B	95	87.029	Ornithorhynchus_anatinus
ENSUAMG00000027335	DDX39B	100	84.045	ENSOCUG00000024126	DDX39B	100	84.045	Oryctolagus_cuniculus
ENSUAMG00000027335	DDX39B	100	85.814	ENSOGAG00000028850	-	100	85.814	Otolemur_garnettii
ENSUAMG00000027335	DDX39B	83	79.144	ENSOGAG00000009067	-	100	81.595	Otolemur_garnettii
ENSUAMG00000027335	DDX39B	100	86.744	ENSOARG00000008787	DDX39B	98	86.744	Ovis_aries
ENSUAMG00000027335	DDX39B	100	86.977	ENSPPAG00000043072	DDX39B	100	86.977	Pan_paniscus
ENSUAMG00000027335	DDX39B	100	87.209	ENSPPRG00000001913	DDX39B	100	87.209	Panthera_pardus
ENSUAMG00000027335	DDX39B	100	86.279	ENSPTIG00000017669	DDX39B	100	86.279	Panthera_tigris_altaica
ENSUAMG00000027335	DDX39B	100	86.977	ENSPTRG00000032509	DDX39B	100	86.977	Pan_troglodytes
ENSUAMG00000027335	DDX39B	100	86.977	ENSPANG00000018609	DDX39B	100	86.977	Papio_anubis
ENSUAMG00000027335	DDX39B	100	78.815	ENSPKIG00000011324	ddx39b	100	79.271	Paramormyrops_kingsleyae
ENSUAMG00000027335	DDX39B	100	86.279	ENSPEMG00000016905	Ddx39b	100	86.279	Peromyscus_maniculatus_bairdii
ENSUAMG00000027335	DDX39B	100	86.977	ENSPCIG00000017572	DDX39B	100	86.977	Phascolarctos_cinereus
ENSUAMG00000027335	DDX39B	100	86.977	ENSPPYG00000016433	DDX39B	100	86.977	Pongo_abelii
ENSUAMG00000027335	DDX39B	65	80.420	ENSPCAG00000003484	DDX39B	100	80.420	Procavia_capensis
ENSUAMG00000027335	DDX39B	100	86.977	ENSPCOG00000018656	DDX39B	100	86.977	Propithecus_coquereli
ENSUAMG00000027335	DDX39B	100	86.512	ENSPVAG00000004653	DDX39B	100	86.512	Pteropus_vampyrus
ENSUAMG00000027335	DDX39B	98	75.000	ENSPNYG00000010382	ddx39b	98	75.176	Pundamilia_nyererei
ENSUAMG00000027335	DDX39B	100	80.137	ENSPNAG00000026926	ddx39b	100	80.137	Pygocentrus_nattereri
ENSUAMG00000027335	DDX39B	100	86.512	ENSRNOG00000000841	Ddx39b	100	86.512	Rattus_norvegicus
ENSUAMG00000027335	DDX39B	100	86.232	ENSRBIG00000031309	DDX39B	100	86.232	Rhinopithecus_bieti
ENSUAMG00000027335	DDX39B	100	86.977	ENSRROG00000039517	DDX39B	100	86.977	Rhinopithecus_roxellana
ENSUAMG00000027335	DDX39B	100	86.232	ENSSBOG00000035513	-	100	86.232	Saimiri_boliviensis_boliviensis
ENSUAMG00000027335	DDX39B	100	86.977	ENSSHAG00000003209	DDX39B	100	86.977	Sarcophilus_harrisii
ENSUAMG00000027335	DDX39B	100	78.588	ENSSFOG00015016107	ddx39b	100	79.271	Scleropages_formosus
ENSUAMG00000027335	DDX39B	100	81.106	ENSSDUG00000011557	ddx39b	100	81.336	Seriola_dumerili
ENSUAMG00000027335	DDX39B	100	80.876	ENSSLDG00000015763	ddx39b	100	81.106	Seriola_lalandi_dorsalis
ENSUAMG00000027335	DDX39B	87	80.585	ENSSARG00000005245	DDX39B	100	80.585	Sorex_araneus
ENSUAMG00000027335	DDX39B	100	84.884	ENSSPUG00000012805	DDX39B	100	84.884	Sphenodon_punctatus
ENSUAMG00000027335	DDX39B	100	86.977	ENSSSCG00000001400	DDX39B	100	84.195	Sus_scrofa
ENSUAMG00000027335	DDX39B	86	92.258	ENSTBEG00000003721	DDX39B	100	68.779	Tupaia_belangeri
ENSUAMG00000027335	DDX39B	100	81.713	ENSTTRG00000014074	DDX39B	100	81.713	Tursiops_truncatus
ENSUAMG00000027335	DDX39B	100	84.670	ENSUMAG00000015124	DDX39B	100	84.434	Ursus_maritimus
ENSUAMG00000027335	DDX39B	60	99.115	ENSVPAG00000009167	-	74	99.115	Vicugna_pacos
ENSUAMG00000027335	DDX39B	100	86.977	ENSVVUG00000019518	DDX39B	99	86.977	Vulpes_vulpes
ENSUAMG00000027335	DDX39B	100	76.047	ENSXETG00000002498	ddx39b	100	76.047	Xenopus_tropicalis