EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000027438 (Gene tree)
Gene ID: -
Gene Symbol: SEPT1
Alias: DIFF6|PNUTL3
Full Name: septin 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 5615 bases
Position: chrLZNR01006220.1:41655-47269
Accession: 2879
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000036201	MMR_HSR1	PF01926.23	3e-08	1	1
ENSUAMP00000036202	MMR_HSR1	PF01926.23	3.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000040286	SEPT1-202	1155	-	ENSUAMP00000036202	384 (aa)	-	-
ENSUAMT00000040285	SEPT1-201	1113	-	ENSUAMP00000036201	370 (aa)	-	-
ENSUAMT00000040288	SEPT1-203	219	-	ENSUAMP00000036204	72 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000027438's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000027438's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000027438	SEPT1	94	39.828	ENSUAMG00000025992	SEPT8	88	39.828
ENSUAMG00000027438	SEPT1	92	41.108	ENSUAMG00000017287	SEPT11	76	41.691
ENSUAMG00000027438	SEPT1	93	56.232	ENSUAMG00000017781	SEPT2	90	56.358
ENSUAMG00000027438	SEPT1	96	65.278	ENSUAMG00000005181	SEPT4	76	65.909
ENSUAMG00000027438	SEPT1	95	63.143	ENSUAMG00000011220	-	92	64.706
ENSUAMG00000027438	SEPT1	74	43.431	ENSUAMG00000013728	SEPT9	86	44.528
ENSUAMG00000027438	SEPT1	89	51.057	ENSUAMG00000003901	SEPT7	76	49.422

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000027438	SEPT1	100	95.312	ENSG00000180096	SEPT1	93	95.312	Homo_sapiens
ENSUAMG00000027438	SEPT1	99	97.820	ENSAMEG00000007865	SEPT1	99	97.820	Ailuropoda_melanoleuca
ENSUAMG00000027438	SEPT1	99	95.640	ENSANAG00000029084	SEPT1	100	95.913	Aotus_nancymaae
ENSUAMG00000027438	SEPT1	99	97.275	ENSBTAG00000021219	SEPT1	100	97.548	Bos_taurus
ENSUAMG00000027438	SEPT1	100	93.490	ENSCJAG00000002577	SEPT1	93	93.490	Callithrix_jacchus
ENSUAMG00000027438	SEPT1	99	98.087	ENSCAFG00000016576	SEPT1	99	98.087	Canis_familiaris
ENSUAMG00000027438	SEPT1	99	98.087	ENSCAFG00020017813	SEPT1	99	98.087	Canis_lupus_dingo
ENSUAMG00000027438	SEPT1	99	94.400	ENSCHIG00000017447	SEPT1	100	94.667	Capra_hircus
ENSUAMG00000027438	SEPT1	99	95.652	ENSTSYG00000035596	SEPT1	100	95.913	Carlito_syrichta
ENSUAMG00000027438	SEPT1	99	74.457	ENSCAPG00000001347	SEPT1	100	74.728	Cavia_aperea
ENSUAMG00000027438	SEPT1	99	92.643	ENSCPOG00000003088	SEPT1	99	92.643	Cavia_porcellus
ENSUAMG00000027438	SEPT1	100	82.292	ENSCCAG00000030164	SEPT1	94	82.292	Cebus_capucinus
ENSUAMG00000027438	SEPT1	99	95.935	ENSCATG00000037250	SEPT1	99	95.935	Cercocebus_atys
ENSUAMG00000027438	SEPT1	99	94.823	ENSCLAG00000010486	SEPT1	100	95.000	Chinchilla_lanigera
ENSUAMG00000027438	SEPT1	99	95.935	ENSCSAG00000006056	SEPT1	99	95.935	Chlorocebus_sabaeus
ENSUAMG00000027438	SEPT1	100	94.792	ENSCANG00000035786	SEPT1	93	94.792	Colobus_angolensis_palliatus
ENSUAMG00000027438	SEPT1	99	94.278	ENSCGRG00001003374	Sept1	100	94.550	Cricetulus_griseus_chok1gshd
ENSUAMG00000027438	SEPT1	99	93.460	ENSCGRG00000004919	Sept1	100	93.733	Cricetulus_griseus_crigri
ENSUAMG00000027438	SEPT1	100	96.094	ENSDNOG00000014680	SEPT1	89	96.094	Dasypus_novemcinctus
ENSUAMG00000027438	SEPT1	99	95.913	ENSDORG00000011443	Sept1	100	96.185	Dipodomys_ordii
ENSUAMG00000027438	SEPT1	92	97.345	ENSEASG00005013153	SEPT1	100	97.345	Equus_asinus_asinus
ENSUAMG00000027438	SEPT1	99	97.011	ENSECAG00000009390	SEPT1	100	96.867	Equus_caballus
ENSUAMG00000027438	SEPT1	99	95.095	ENSEEUG00000007661	SEPT1	100	95.368	Erinaceus_europaeus
ENSUAMG00000027438	SEPT1	99	97.820	ENSFCAG00000013541	SEPT1	98	97.389	Felis_catus
ENSUAMG00000027438	SEPT1	100	74.680	ENSGGOG00000017024	SEPT1	92	74.680	Gorilla_gorilla
ENSUAMG00000027438	SEPT1	99	97.275	ENSSTOG00000002782	SEPT1	100	97.548	Ictidomys_tridecemlineatus
ENSUAMG00000027438	SEPT1	99	94.536	ENSJJAG00000023131	Sept1	100	94.550	Jaculus_jaculus
ENSUAMG00000027438	SEPT1	99	95.628	ENSLAFG00000027789	SEPT1	99	95.628	Loxodonta_africana
ENSUAMG00000027438	SEPT1	100	95.052	ENSMFAG00000031504	SEPT1	93	95.052	Macaca_fascicularis
ENSUAMG00000027438	SEPT1	100	89.062	ENSMMUG00000021842	SEPT1	99	96.210	Macaca_mulatta
ENSUAMG00000027438	SEPT1	100	83.896	ENSMNEG00000041695	SEPT1	93	83.896	Macaca_nemestrina
ENSUAMG00000027438	SEPT1	100	86.979	ENSMLEG00000039481	SEPT1	92	86.979	Mandrillus_leucophaeus
ENSUAMG00000027438	SEPT1	99	95.368	ENSMAUG00000009531	Sept1	100	95.640	Mesocricetus_auratus
ENSUAMG00000027438	SEPT1	99	97.268	ENSMICG00000011817	SEPT1	94	97.268	Microcebus_murinus
ENSUAMG00000027438	SEPT1	99	94.550	ENSMOCG00000017518	Sept1	100	94.823	Microtus_ochrogaster
ENSUAMG00000027438	SEPT1	99	94.823	MGP_CAROLIEiJ_G0030492	Sept1	100	97.241	Mus_caroli
ENSUAMG00000027438	SEPT1	99	95.095	ENSMUSG00000000486	Sept1	100	97.241	Mus_musculus
ENSUAMG00000027438	SEPT1	99	94.823	MGP_PahariEiJ_G0013702	Sept1	100	96.552	Mus_pahari
ENSUAMG00000027438	SEPT1	99	94.823	MGP_SPRETEiJ_G0031606	Sept1	100	96.552	Mus_spretus
ENSUAMG00000027438	SEPT1	99	96.721	ENSMLUG00000006749	SEPT1	99	96.721	Myotis_lucifugus
ENSUAMG00000027438	SEPT1	99	95.640	ENSNGAG00000021368	Sept1	100	95.913	Nannospalax_galili
ENSUAMG00000027438	SEPT1	99	90.710	ENSMEUG00000000492	SEPT1	100	89.617	Notamacropus_eugenii
ENSUAMG00000027438	SEPT1	99	93.188	ENSOPRG00000007981	SEPT1	100	93.460	Ochotona_princeps
ENSUAMG00000027438	SEPT1	99	93.207	ENSODEG00000014531	SEPT1	100	93.478	Octodon_degus
ENSUAMG00000027438	SEPT1	99	88.283	ENSOANG00000005331	SEPT1	100	87.738	Ornithorhynchus_anatinus
ENSUAMG00000027438	SEPT1	99	97.814	ENSOGAG00000013350	SEPT1	99	97.814	Otolemur_garnettii
ENSUAMG00000027438	SEPT1	99	96.739	ENSOARG00000006135	SEPT1	99	96.739	Ovis_aries
ENSUAMG00000027438	SEPT1	100	77.083	ENSPPAG00000032680	SEPT1	92	77.083	Pan_paniscus
ENSUAMG00000027438	SEPT1	99	98.087	ENSPPRG00000008648	-	100	98.087	Panthera_pardus
ENSUAMG00000027438	SEPT1	84	97.214	ENSPTIG00000006718	SEPT1	91	97.214	Panthera_tigris_altaica
ENSUAMG00000027438	SEPT1	100	95.312	ENSPTRG00000007998	SEPT1	93	95.312	Pan_troglodytes
ENSUAMG00000027438	SEPT1	99	87.534	ENSPANG00000032364	SEPT1	99	87.534	Papio_anubis
ENSUAMG00000027438	SEPT1	99	95.628	ENSPEMG00000023616	Sept1	100	95.640	Peromyscus_maniculatus_bairdii
ENSUAMG00000027438	SEPT1	99	90.736	ENSPCIG00000001537	SEPT1	100	89.918	Phascolarctos_cinereus
ENSUAMG00000027438	SEPT1	84	95.498	ENSPPYG00000007270	-	100	96.429	Pongo_abelii
ENSUAMG00000027438	SEPT1	99	94.278	ENSPCAG00000009042	SEPT1	100	94.550	Procavia_capensis
ENSUAMG00000027438	SEPT1	99	96.748	ENSPCOG00000028121	SEPT1	93	96.809	Propithecus_coquereli
ENSUAMG00000027438	SEPT1	99	98.365	ENSPVAG00000008655	SEPT1	100	98.638	Pteropus_vampyrus
ENSUAMG00000027438	SEPT1	99	94.278	ENSRNOG00000017804	Sept1	100	94.550	Rattus_norvegicus
ENSUAMG00000027438	SEPT1	100	94.531	ENSRBIG00000036580	SEPT1	93	94.531	Rhinopithecus_bieti
ENSUAMG00000027438	SEPT1	100	94.531	ENSRROG00000038708	SEPT1	99	95.393	Rhinopithecus_roxellana
ENSUAMG00000027438	SEPT1	100	94.010	ENSSBOG00000021733	SEPT1	93	94.010	Saimiri_boliviensis_boliviensis
ENSUAMG00000027438	SEPT1	99	90.164	ENSSHAG00000006478	SEPT1	100	88.410	Sarcophilus_harrisii
ENSUAMG00000027438	SEPT1	99	97.275	ENSSSCG00000007800	SEPT1	100	97.548	Sus_scrofa
ENSUAMG00000027438	SEPT1	99	97.548	ENSTTRG00000017272	SEPT1	100	97.820	Tursiops_truncatus
ENSUAMG00000027438	SEPT1	99	100.000	ENSUMAG00000011345	SEPT1	100	100.000	Ursus_maritimus
ENSUAMG00000027438	SEPT1	91	97.619	ENSVVUG00000026116	SEPT1	90	97.619	Vulpes_vulpes