EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000027471 (Gene tree)
Gene ID: -
Gene Symbol: RAB5A
Alias: RAB5
Full Name: RAB5A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 28424 bases
Position: chrLZNR01006237.1:140823-169246
Accession: 9783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000036241	MMR_HSR1	PF01926.23	7.1e-05	1	1
ENSUAMP00000036243	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000040333	RAB5A-202	690	-	ENSUAMP00000036243	229 (aa)	-	-
ENSUAMT00000040331	RAB5A-201	1244	-	ENSUAMP00000036241	184 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000027471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000027471's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000027471	RAB5A	86	44.937	ENSUAMG00000009326	RAB30	86	40.426
ENSUAMG00000027471	RAB5A	85	49.045	ENSUAMG00000021114	RAB1B	96	42.857
ENSUAMG00000027471	RAB5A	89	32.530	ENSUAMG00000010975	RAB36	50	32.530
ENSUAMG00000027471	RAB5A	85	49.045	ENSUAMG00000006639	-	99	38.532
ENSUAMG00000027471	RAB5A	89	44.785	ENSUAMG00000015697	RAB25	85	40.000
ENSUAMG00000027471	RAB5A	88	30.909	ENSUAMG00000005003	RAB34	64	30.909
ENSUAMG00000027471	RAB5A	86	33.962	ENSUAMG00000016388	KRAS	84	33.962
ENSUAMG00000027471	RAB5A	89	36.145	ENSUAMG00000023026	RAB39B	78	36.145
ENSUAMG00000027471	RAB5A	89	35.366	ENSUAMG00000013367	RAB23	69	35.366
ENSUAMG00000027471	RAB5A	84	36.420	ENSUAMG00000028103	-	79	36.420
ENSUAMG00000027471	RAB5A	85	47.771	ENSUAMG00000026548	RAB11A	97	38.813
ENSUAMG00000027471	RAB5A	84	36.420	ENSUAMG00000021018	-	79	36.420
ENSUAMG00000027471	RAB5A	92	30.460	ENSUAMG00000009585	DNAJC27	63	30.460
ENSUAMG00000027471	RAB5A	83	35.294	ENSUAMG00000015761	-	66	35.294
ENSUAMG00000027471	RAB5A	89	34.731	ENSUAMG00000010578	RERG	82	34.731
ENSUAMG00000027471	RAB5A	86	38.365	ENSUAMG00000018092	RAB12	73	35.233
ENSUAMG00000027471	RAB5A	52	30.159	ENSUAMG00000009218	ARL4A	60	30.159
ENSUAMG00000027471	RAB5A	89	40.491	ENSUAMG00000003164	RAB14	94	36.111
ENSUAMG00000027471	RAB5A	86	41.104	ENSUAMG00000023005	RAB33A	69	41.104
ENSUAMG00000027471	RAB5A	93	40.909	ENSUAMG00000018967	RAB7A	85	40.909
ENSUAMG00000027471	RAB5A	86	33.333	ENSUAMG00000027527	-	97	30.151
ENSUAMG00000027471	RAB5A	84	38.272	ENSUAMG00000018451	RAB9B	97	31.628
ENSUAMG00000027471	RAB5A	99	83.607	ENSUAMG00000014651	RAB5B	100	76.856
ENSUAMG00000027471	RAB5A	84	30.303	ENSUAMG00000020617	RASL11B	64	30.303
ENSUAMG00000027471	RAB5A	86	39.877	ENSUAMG00000022667	RAB33B	75	37.297
ENSUAMG00000027471	RAB5A	99	90.217	ENSUAMG00000024343	RAB5C	100	82.174

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000027471	RAB5A	99	97.268	ENSG00000144566	RAB5A	100	93.013	Homo_sapiens
ENSUAMG00000027471	RAB5A	99	95.652	ENSAPOG00000021391	rab5aa	100	86.522	Acanthochromis_polyacanthus
ENSUAMG00000027471	RAB5A	99	97.814	ENSAMEG00000000954	RAB5A	100	93.886	Ailuropoda_melanoleuca
ENSUAMG00000027471	RAB5A	99	95.652	ENSACIG00000019251	rab5aa	100	86.957	Amphilophus_citrinellus
ENSUAMG00000027471	RAB5A	99	96.196	ENSAOCG00000000090	rab5aa	100	87.391	Amphiprion_ocellaris
ENSUAMG00000027471	RAB5A	99	96.196	ENSAPEG00000013376	rab5aa	100	87.391	Amphiprion_percula
ENSUAMG00000027471	RAB5A	99	96.196	ENSATEG00000014748	rab5aa	100	86.957	Anabas_testudineus
ENSUAMG00000027471	RAB5A	99	95.628	ENSACAG00000000017	RAB5A	100	90.393	Anolis_carolinensis
ENSUAMG00000027471	RAB5A	99	97.814	ENSANAG00000025120	RAB5A	100	93.886	Aotus_nancymaae
ENSUAMG00000027471	RAB5A	99	96.196	ENSACLG00000018066	rab5aa	100	87.391	Astatotilapia_calliptera
ENSUAMG00000027471	RAB5A	99	96.196	ENSAMXG00000036179	rab5aa	100	86.522	Astyanax_mexicanus
ENSUAMG00000027471	RAB5A	99	93.514	ENSAMXG00000035919	rab5ab	100	84.416	Astyanax_mexicanus
ENSUAMG00000027471	RAB5A	99	97.814	ENSBTAG00000046385	RAB5A	100	93.450	Bos_taurus
ENSUAMG00000027471	RAB5A	99	97.814	ENSCJAG00000048394	RAB5A	100	93.886	Callithrix_jacchus
ENSUAMG00000027471	RAB5A	99	97.814	ENSCAFG00000005814	RAB5A	100	93.886	Canis_familiaris
ENSUAMG00000027471	RAB5A	99	97.814	ENSCAFG00020027287	RAB5A	100	93.886	Canis_lupus_dingo
ENSUAMG00000027471	RAB5A	99	97.268	ENSCHIG00000025419	-	100	93.013	Capra_hircus
ENSUAMG00000027471	RAB5A	99	97.268	ENSTSYG00000007642	-	100	93.450	Carlito_syrichta
ENSUAMG00000027471	RAB5A	99	90.710	ENSTSYG00000030238	-	100	87.773	Carlito_syrichta
ENSUAMG00000027471	RAB5A	99	97.814	ENSCCAG00000022405	RAB5A	100	93.886	Cebus_capucinus
ENSUAMG00000027471	RAB5A	99	97.814	ENSCATG00000033588	-	100	93.886	Cercocebus_atys
ENSUAMG00000027471	RAB5A	99	97.268	ENSCLAG00000006053	-	100	93.013	Chinchilla_lanigera
ENSUAMG00000027471	RAB5A	99	97.814	ENSCSAG00000009831	RAB5A	100	93.886	Chlorocebus_sabaeus
ENSUAMG00000027471	RAB5A	99	96.175	ENSCPBG00000022559	RAB5A	100	89.956	Chrysemys_picta_bellii
ENSUAMG00000027471	RAB5A	99	97.814	ENSCANG00000043514	RAB5A	100	93.886	Colobus_angolensis_palliatus
ENSUAMG00000027471	RAB5A	99	96.721	ENSCGRG00001020018	-	100	92.140	Cricetulus_griseus_chok1gshd
ENSUAMG00000027471	RAB5A	99	96.721	ENSCGRG00000002786	-	100	92.140	Cricetulus_griseus_crigri
ENSUAMG00000027471	RAB5A	99	95.652	ENSCVAG00000008239	rab5aa	99	87.336	Cyprinodon_variegatus
ENSUAMG00000027471	RAB5A	99	95.109	ENSDARG00000018602	rab5aa	100	87.391	Danio_rerio
ENSUAMG00000027471	RAB5A	99	94.022	ENSDARG00000007257	rab5ab	99	86.463	Danio_rerio
ENSUAMG00000027471	RAB5A	99	97.268	ENSDNOG00000038467	RAB5A	100	93.450	Dasypus_novemcinctus
ENSUAMG00000027471	RAB5A	99	97.814	ENSDORG00000024958	-	100	93.886	Dipodomys_ordii
ENSUAMG00000027471	RAB5A	99	97.814	ENSEASG00005005818	RAB5A	100	93.450	Equus_asinus_asinus
ENSUAMG00000027471	RAB5A	99	97.814	ENSECAG00000019062	RAB5A	100	93.886	Equus_caballus
ENSUAMG00000027471	RAB5A	99	97.814	ENSEEUG00000009044	RAB5A	100	93.013	Erinaceus_europaeus
ENSUAMG00000027471	RAB5A	99	95.652	ENSELUG00000006462	rab5aa	100	87.826	Esox_lucius
ENSUAMG00000027471	RAB5A	99	94.022	ENSELUG00000013436	rab5ab	99	86.463	Esox_lucius
ENSUAMG00000027471	RAB5A	99	97.814	ENSFCAG00000039795	-	100	93.886	Felis_catus
ENSUAMG00000027471	RAB5A	99	96.175	ENSFALG00000009239	RAB5A	100	90.830	Ficedula_albicollis
ENSUAMG00000027471	RAB5A	99	96.721	ENSFDAG00000005631	-	100	93.013	Fukomys_damarensis
ENSUAMG00000027471	RAB5A	99	95.652	ENSFHEG00000014070	rab5aa	99	87.336	Fundulus_heteroclitus
ENSUAMG00000027471	RAB5A	96	95.506	ENSGMOG00000007127	RAB5A	97	95.506	Gadus_morhua
ENSUAMG00000027471	RAB5A	99	95.109	ENSGMOG00000002868	rab5aa	99	85.590	Gadus_morhua
ENSUAMG00000027471	RAB5A	99	96.175	ENSGALG00000011272	RAB5A	100	90.830	Gallus_gallus
ENSUAMG00000027471	RAB5A	99	94.565	ENSGAFG00000011619	rab5aa	99	87.336	Gambusia_affinis
ENSUAMG00000027471	RAB5A	99	94.565	ENSGACG00000004997	rab5aa	100	85.652	Gasterosteus_aculeatus
ENSUAMG00000027471	RAB5A	99	96.721	ENSGAGG00000005319	RAB5A	100	90.393	Gopherus_agassizii
ENSUAMG00000027471	RAB5A	99	97.268	ENSGGOG00000015981	RAB5A	100	93.013	Gorilla_gorilla
ENSUAMG00000027471	RAB5A	99	96.196	ENSHBUG00000003752	rab5aa	100	87.391	Haplochromis_burtoni
ENSUAMG00000027471	RAB5A	99	89.560	ENSHGLG00000017749	-	97	85.526	Heterocephalus_glaber_female
ENSUAMG00000027471	RAB5A	99	97.814	ENSHGLG00000006357	-	100	93.694	Heterocephalus_glaber_female
ENSUAMG00000027471	RAB5A	99	89.011	ENSHGLG00100008816	-	97	85.526	Heterocephalus_glaber_male
ENSUAMG00000027471	RAB5A	99	97.814	ENSHGLG00100007553	RAB5A	100	93.886	Heterocephalus_glaber_male
ENSUAMG00000027471	RAB5A	99	92.973	ENSIPUG00000023392	rab5a	100	84.416	Ictalurus_punctatus
ENSUAMG00000027471	RAB5A	99	97.814	ENSSTOG00000026229	RAB5A	100	93.450	Ictidomys_tridecemlineatus
ENSUAMG00000027471	RAB5A	99	96.721	ENSJJAG00000020190	Rab5a	100	90.830	Jaculus_jaculus
ENSUAMG00000027471	RAB5A	99	96.196	ENSKMAG00000005111	rab5aa	100	86.957	Kryptolebias_marmoratus
ENSUAMG00000027471	RAB5A	97	96.067	ENSLBEG00000002516	rab5aa	93	87.054	Labrus_bergylta
ENSUAMG00000027471	RAB5A	99	95.109	ENSLACG00000004663	RAB5A	100	88.261	Latimeria_chalumnae
ENSUAMG00000027471	RAB5A	99	95.109	ENSLOCG00000006591	rab5ab	100	87.826	Lepisosteus_oculatus
ENSUAMG00000027471	RAB5A	99	97.814	ENSLAFG00000008321	RAB5A	100	93.450	Loxodonta_africana
ENSUAMG00000027471	RAB5A	99	97.814	ENSMFAG00000002326	RAB5A	100	93.886	Macaca_fascicularis
ENSUAMG00000027471	RAB5A	81	95.302	ENSMMUG00000032398	-	87	95.302	Macaca_mulatta
ENSUAMG00000027471	RAB5A	98	99.444	ENSMMUG00000006992	RAB5A	91	99.444	Macaca_mulatta
ENSUAMG00000027471	RAB5A	99	97.814	ENSMNEG00000039149	-	100	93.886	Macaca_nemestrina
ENSUAMG00000027471	RAB5A	99	97.814	ENSMLEG00000028944	RAB5A	100	93.886	Mandrillus_leucophaeus
ENSUAMG00000027471	RAB5A	99	96.196	ENSMAMG00000012573	rab5aa	100	87.391	Mastacembelus_armatus
ENSUAMG00000027471	RAB5A	99	96.196	ENSMZEG00005005205	rab5aa	100	87.391	Maylandia_zebra
ENSUAMG00000027471	RAB5A	99	96.175	ENSMGAG00000010961	RAB5A	100	91.266	Meleagris_gallopavo
ENSUAMG00000027471	RAB5A	99	97.814	ENSMAUG00000011242	-	100	93.013	Mesocricetus_auratus
ENSUAMG00000027471	RAB5A	99	97.814	ENSMICG00000049130	RAB5A	100	93.886	Microcebus_murinus
ENSUAMG00000027471	RAB5A	99	97.814	ENSMOCG00000009706	Rab5a	100	92.576	Microtus_ochrogaster
ENSUAMG00000027471	RAB5A	99	95.109	ENSMMOG00000019135	rab5aa	100	86.087	Mola_mola
ENSUAMG00000027471	RAB5A	97	98.324	ENSMODG00000014793	RAB5A	97	98.324	Monodelphis_domestica
ENSUAMG00000027471	RAB5A	99	95.109	ENSMALG00000014929	rab5aa	100	86.087	Monopterus_albus
ENSUAMG00000027471	RAB5A	98	99.444	MGP_CAROLIEiJ_G0021741	Rab5a	99	99.444	Mus_caroli
ENSUAMG00000027471	RAB5A	99	97.814	ENSMUSG00000017831	Rab5a	100	93.013	Mus_musculus
ENSUAMG00000027471	RAB5A	97	100.000	MGP_PahariEiJ_G0020730	Rab5a	96	100.000	Mus_pahari
ENSUAMG00000027471	RAB5A	99	97.814	ENSMPUG00000013147	RAB5A	100	93.886	Mustela_putorius_furo
ENSUAMG00000027471	RAB5A	99	97.814	ENSMLUG00000011716	RAB5A	100	93.886	Myotis_lucifugus
ENSUAMG00000027471	RAB5A	99	97.268	ENSNGAG00000021245	-	100	93.013	Nannospalax_galili
ENSUAMG00000027471	RAB5A	99	96.196	ENSNBRG00000011763	rab5aa	100	87.391	Neolamprologus_brichardi
ENSUAMG00000027471	RAB5A	99	97.268	ENSNLEG00000003434	RAB5A	100	93.450	Nomascus_leucogenys
ENSUAMG00000027471	RAB5A	96	99.435	ENSOPRG00000011278	RAB5A	100	99.435	Ochotona_princeps
ENSUAMG00000027471	RAB5A	79	100.000	ENSODEG00000000290	-	100	100.000	Octodon_degus
ENSUAMG00000027471	RAB5A	97	88.398	ENSODEG00000019065	-	95	88.398	Octodon_degus
ENSUAMG00000027471	RAB5A	99	96.196	ENSONIG00000002425	rab5aa	100	87.391	Oreochromis_niloticus
ENSUAMG00000027471	RAB5A	99	97.268	ENSOANG00000004989	RAB5A	97	91.150	Ornithorhynchus_anatinus
ENSUAMG00000027471	RAB5A	99	97.814	ENSOCUG00000012200	RAB5A	100	93.450	Oryctolagus_cuniculus
ENSUAMG00000027471	RAB5A	99	95.109	ENSORLG00000012261	rab5aa	100	86.522	Oryzias_latipes
ENSUAMG00000027471	RAB5A	99	95.109	ENSORLG00020020922	rab5aa	100	86.522	Oryzias_latipes_hni
ENSUAMG00000027471	RAB5A	99	95.109	ENSORLG00015012854	rab5aa	100	86.522	Oryzias_latipes_hsok
ENSUAMG00000027471	RAB5A	99	93.478	ENSORLG00015017737	rab5ab	100	85.217	Oryzias_latipes_hsok
ENSUAMG00000027471	RAB5A	99	95.652	ENSOMEG00000010692	rab5aa	100	87.391	Oryzias_melastigma
ENSUAMG00000027471	RAB5A	99	97.268	ENSOARG00000015722	RAB5A	100	93.013	Ovis_aries
ENSUAMG00000027471	RAB5A	99	97.268	ENSPPAG00000041763	RAB5A	100	92.609	Pan_paniscus
ENSUAMG00000027471	RAB5A	99	97.814	ENSPPRG00000001655	-	100	93.886	Panthera_pardus
ENSUAMG00000027471	RAB5A	99	97.814	ENSPTIG00000021685	RAB5A	100	93.886	Panthera_tigris_altaica
ENSUAMG00000027471	RAB5A	99	97.268	ENSPTRG00000014682	RAB5A	100	92.609	Pan_troglodytes
ENSUAMG00000027471	RAB5A	99	97.814	ENSPANG00000001328	RAB5A	100	93.886	Papio_anubis
ENSUAMG00000027471	RAB5A	99	95.652	ENSPKIG00000009578	rab5ab	100	87.391	Paramormyrops_kingsleyae
ENSUAMG00000027471	RAB5A	99	93.478	ENSPKIG00000010291	RAB5A	100	83.913	Paramormyrops_kingsleyae
ENSUAMG00000027471	RAB5A	99	96.721	ENSPSIG00000007157	RAB5A	100	90.830	Pelodiscus_sinensis
ENSUAMG00000027471	RAB5A	99	96.196	ENSPMGG00000001915	rab5aa	100	86.522	Periophthalmus_magnuspinnatus
ENSUAMG00000027471	RAB5A	99	97.268	ENSPCIG00000018321	RAB5A	100	93.450	Phascolarctos_cinereus
ENSUAMG00000027471	RAB5A	99	95.109	ENSPFOG00000011263	rab5aa	99	87.773	Poecilia_formosa
ENSUAMG00000027471	RAB5A	99	95.109	ENSPLAG00000017838	rab5aa	99	87.773	Poecilia_latipinna
ENSUAMG00000027471	RAB5A	99	95.109	ENSPMEG00000007238	rab5aa	99	87.773	Poecilia_mexicana
ENSUAMG00000027471	RAB5A	99	97.268	ENSPPYG00000014074	RAB5A	100	93.450	Pongo_abelii
ENSUAMG00000027471	RAB5A	99	97.814	ENSPCOG00000013289	RAB5A	100	93.886	Propithecus_coquereli
ENSUAMG00000027471	RAB5A	99	97.268	ENSPVAG00000006730	RAB5A	100	93.450	Pteropus_vampyrus
ENSUAMG00000027471	RAB5A	99	96.196	ENSPNYG00000010612	rab5aa	100	87.391	Pundamilia_nyererei
ENSUAMG00000027471	RAB5A	99	92.973	ENSPNAG00000009496	rab5ab	100	84.416	Pygocentrus_nattereri
ENSUAMG00000027471	RAB5A	99	96.196	ENSPNAG00000023223	rab5aa	100	86.522	Pygocentrus_nattereri
ENSUAMG00000027471	RAB5A	99	97.814	ENSRBIG00000036122	RAB5A	100	93.886	Rhinopithecus_bieti
ENSUAMG00000027471	RAB5A	99	97.814	ENSRROG00000037687	RAB5A	100	93.886	Rhinopithecus_roxellana
ENSUAMG00000027471	RAB5A	99	96.739	ENSSHAG00000006787	RAB5A	100	93.450	Sarcophilus_harrisii
ENSUAMG00000027471	RAB5A	99	95.652	ENSSFOG00015014517	rab5a	100	87.391	Scleropages_formosus
ENSUAMG00000027471	RAB5A	97	94.972	ENSSFOG00015021115	-	98	86.222	Scleropages_formosus
ENSUAMG00000027471	RAB5A	99	95.652	ENSSMAG00000009229	rab5aa	100	86.957	Scophthalmus_maximus
ENSUAMG00000027471	RAB5A	99	96.196	ENSSDUG00000009835	rab5aa	100	87.391	Seriola_dumerili
ENSUAMG00000027471	RAB5A	99	96.196	ENSSLDG00000011069	rab5aa	100	87.391	Seriola_lalandi_dorsalis
ENSUAMG00000027471	RAB5A	97	98.324	ENSSPUG00000001173	RAB5A	92	98.324	Sphenodon_punctatus
ENSUAMG00000027471	RAB5A	99	95.652	ENSSPAG00000015678	rab5aa	100	86.522	Stegastes_partitus
ENSUAMG00000027471	RAB5A	99	97.814	ENSSSCG00000037653	RAB5A	100	92.576	Sus_scrofa
ENSUAMG00000027471	RAB5A	99	96.175	ENSTGUG00000003236	RAB5A	100	90.393	Taeniopygia_guttata
ENSUAMG00000027471	RAB5A	99	95.109	ENSTRUG00000024368	rab5aa	99	85.590	Takifugu_rubripes
ENSUAMG00000027471	RAB5A	99	95.109	ENSTNIG00000009196	rab5aa	100	85.652	Tetraodon_nigroviridis
ENSUAMG00000027471	RAB5A	99	97.814	ENSTTRG00000001374	RAB5A	100	93.886	Tursiops_truncatus
ENSUAMG00000027471	RAB5A	99	97.814	ENSUMAG00000018295	RAB5A	100	93.886	Ursus_maritimus
ENSUAMG00000027471	RAB5A	99	97.814	ENSVVUG00000000489	RAB5A	100	93.886	Vulpes_vulpes
ENSUAMG00000027471	RAB5A	99	95.109	ENSXETG00000002305	rab5a	100	87.826	Xenopus_tropicalis
ENSUAMG00000027471	RAB5A	99	94.565	ENSXCOG00000020121	rab5aa	99	87.336	Xiphophorus_couchianus
ENSUAMG00000027471	RAB5A	99	95.109	ENSXMAG00000028889	rab5aa	99	87.773	Xiphophorus_maculatus