EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000028270 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 7237 bases
Position: chrLZNR01015921.1:12056-19292
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000037327	zf-C2H2	PF00096.26	2.7e-128	1	20
ENSUAMP00000037327	zf-C2H2	PF00096.26	2.7e-128	2	20
ENSUAMP00000037327	zf-C2H2	PF00096.26	2.7e-128	3	20
ENSUAMP00000037327	zf-C2H2	PF00096.26	2.7e-128	4	20
ENSUAMP00000037327	zf-C2H2	PF00096.26	2.7e-128	5	20
ENSUAMP00000037327	zf-C2H2	PF00096.26	2.7e-128	6	20
ENSUAMP00000037327	zf-C2H2	PF00096.26	2.7e-128	7	20
ENSUAMP00000037327	zf-C2H2	PF00096.26	2.7e-128	8	20
ENSUAMP00000037327	zf-C2H2	PF00096.26	2.7e-128	9	20
ENSUAMP00000037327	zf-C2H2	PF00096.26	2.7e-128	10	20
ENSUAMP00000037327	zf-C2H2	PF00096.26	2.7e-128	11	20
ENSUAMP00000037327	zf-C2H2	PF00096.26	2.7e-128	12	20
ENSUAMP00000037327	zf-C2H2	PF00096.26	2.7e-128	13	20
ENSUAMP00000037327	zf-C2H2	PF00096.26	2.7e-128	14	20
ENSUAMP00000037327	zf-C2H2	PF00096.26	2.7e-128	15	20
ENSUAMP00000037327	zf-C2H2	PF00096.26	2.7e-128	16	20
ENSUAMP00000037327	zf-C2H2	PF00096.26	2.7e-128	17	20
ENSUAMP00000037327	zf-C2H2	PF00096.26	2.7e-128	18	20
ENSUAMP00000037327	zf-C2H2	PF00096.26	2.7e-128	19	20
ENSUAMP00000037327	zf-C2H2	PF00096.26	2.7e-128	20	20
ENSUAMP00000037326	zf-C2H2	PF00096.26	1.4e-65	1	10
ENSUAMP00000037326	zf-C2H2	PF00096.26	1.4e-65	2	10
ENSUAMP00000037326	zf-C2H2	PF00096.26	1.4e-65	3	10
ENSUAMP00000037326	zf-C2H2	PF00096.26	1.4e-65	4	10
ENSUAMP00000037326	zf-C2H2	PF00096.26	1.4e-65	5	10
ENSUAMP00000037326	zf-C2H2	PF00096.26	1.4e-65	6	10
ENSUAMP00000037326	zf-C2H2	PF00096.26	1.4e-65	7	10
ENSUAMP00000037326	zf-C2H2	PF00096.26	1.4e-65	8	10
ENSUAMP00000037326	zf-C2H2	PF00096.26	1.4e-65	9	10
ENSUAMP00000037326	zf-C2H2	PF00096.26	1.4e-65	10	10
ENSUAMP00000037327	zf-met	PF12874.7	3.2e-18	1	1
ENSUAMP00000037326	zf-met	PF12874.7	4.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000041554	-	1809	-	ENSUAMP00000037326	602 (aa)	-	-
ENSUAMT00000041555	-	2781	-	ENSUAMP00000037327	926 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000028270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000028270's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000028270	-	92	36.029	ENSUAMG00000019189	GTF3A	94	36.296
ENSUAMG00000028270	-	86	38.554	ENSUAMG00000015024	ZNF770	96	38.554
ENSUAMG00000028270	-	89	49.315	ENSUAMG00000019322	MYNN	51	39.919
ENSUAMG00000028270	-	90	67.000	ENSUAMG00000027415	-	85	64.878
ENSUAMG00000028270	-	89	56.863	ENSUAMG00000004827	-	67	56.489
ENSUAMG00000028270	-	90	53.602	ENSUAMG00000001062	-	99	54.007
ENSUAMG00000028270	-	90	32.673	ENSUAMG00000015014	PATZ1	52	30.337
ENSUAMG00000028270	-	90	35.317	ENSUAMG00000016827	ZNF319	91	35.119
ENSUAMG00000028270	-	93	45.904	ENSUAMG00000014969	ZNF112	86	45.785
ENSUAMG00000028270	-	95	35.033	ENSUAMG00000023864	ZNF574	93	37.403
ENSUAMG00000028270	-	68	36.620	ENSUAMG00000020030	SNAI3	60	34.965
ENSUAMG00000028270	-	89	39.024	ENSUAMG00000015472	ZNF236	79	40.698
ENSUAMG00000028270	-	90	50.380	ENSUAMG00000000212	-	84	50.000
ENSUAMG00000028270	-	91	48.366	ENSUAMG00000017817	-	98	48.366
ENSUAMG00000028270	-	91	44.904	ENSUAMG00000010517	-	89	44.444
ENSUAMG00000028270	-	90	51.534	ENSUAMG00000010469	ZNF582	84	51.534
ENSUAMG00000028270	-	98	45.000	ENSUAMG00000014479	ZNF317	94	46.189
ENSUAMG00000028270	-	96	63.089	ENSUAMG00000027381	-	100	61.807
ENSUAMG00000028270	-	99	64.871	ENSUAMG00000027384	-	97	64.871
ENSUAMG00000028270	-	92	40.175	ENSUAMG00000009994	PRDM5	71	40.175
ENSUAMG00000028270	-	86	32.843	ENSUAMG00000008738	ZNF646	90	32.609
ENSUAMG00000028270	-	93	38.596	ENSUAMG00000024556	ZNF652	79	39.013
ENSUAMG00000028270	-	72	46.296	ENSUAMG00000010113	SALL4	53	46.296
ENSUAMG00000028270	-	94	35.144	ENSUAMG00000011794	ZNF526	94	31.445
ENSUAMG00000028270	-	90	34.890	ENSUAMG00000012111	ZFP64	92	34.431
ENSUAMG00000028270	-	65	35.821	ENSUAMG00000014942	SNAI2	59	35.821
ENSUAMG00000028270	-	90	51.550	ENSUAMG00000027191	-	72	51.505
ENSUAMG00000028270	-	90	55.714	ENSUAMG00000022172	-	64	55.401
ENSUAMG00000028270	-	86	34.135	ENSUAMG00000019888	ZNF784	72	37.569
ENSUAMG00000028270	-	89	53.927	ENSUAMG00000020195	ZNF628	60	56.897
ENSUAMG00000028270	-	89	38.889	ENSUAMG00000004622	MAZ	91	38.393
ENSUAMG00000028270	-	98	63.940	ENSUAMG00000016706	-	97	63.940
ENSUAMG00000028270	-	97	53.333	ENSUAMG00000004882	-	88	53.333
ENSUAMG00000028270	-	90	47.769	ENSUAMG00000012109	ZNF658	90	47.563
ENSUAMG00000028270	-	90	48.996	ENSUAMG00000017632	ZFP1	79	48.544
ENSUAMG00000028270	-	90	52.014	ENSUAMG00000013693	ZNF226	78	52.014
ENSUAMG00000028270	-	75	31.797	ENSUAMG00000011329	ZFAT	59	31.818
ENSUAMG00000028270	-	74	48.214	ENSUAMG00000021858	-	62	48.214
ENSUAMG00000028270	-	92	53.125	ENSUAMG00000026246	ZNF454	89	53.125
ENSUAMG00000028270	-	95	51.641	ENSUAMG00000013694	ZNF234	97	50.364
ENSUAMG00000028270	-	99	57.750	ENSUAMG00000005918	-	94	57.750
ENSUAMG00000028270	-	93	51.883	ENSUAMG00000005458	ZNF235	70	51.883
ENSUAMG00000028270	-	90	46.610	ENSUAMG00000019652	-	89	45.781

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000028270	-	91	79.750	ENSBTAG00000038088	-	100	79.750	Bos_taurus
ENSUAMG00000028270	-	96	90.674	ENSCAFG00000029340	-	95	90.674	Canis_familiaris
ENSUAMG00000028270	-	96	90.674	ENSCAFG00020014950	-	99	90.674	Canis_lupus_dingo
ENSUAMG00000028270	-	95	60.619	ENSCAFG00020014929	-	95	63.665	Canis_lupus_dingo
ENSUAMG00000028270	-	90	63.033	ENSCPBG00000017494	-	91	57.653	Chrysemys_picta_bellii
ENSUAMG00000028270	-	99	56.469	ENSEASG00005020355	-	98	58.735	Equus_asinus_asinus
ENSUAMG00000028270	-	93	75.220	ENSEASG00005020335	-	96	71.477	Equus_asinus_asinus
ENSUAMG00000028270	-	96	77.816	ENSECAG00000002193	-	99	77.816	Equus_caballus
ENSUAMG00000028270	-	98	61.860	ENSECAG00000013505	-	97	60.534	Equus_caballus
ENSUAMG00000028270	-	96	59.699	ENSECAG00000002021	-	93	57.878	Equus_caballus
ENSUAMG00000028270	-	99	60.801	ENSGAGG00000020594	-	99	60.801	Gopherus_agassizii
ENSUAMG00000028270	-	90	52.236	ENSLACG00000004191	-	83	52.236	Latimeria_chalumnae
ENSUAMG00000028270	-	96	60.448	ENSMPUG00000008442	-	95	65.136	Mustela_putorius_furo
ENSUAMG00000028270	-	96	87.952	ENSMPUG00000006213	-	95	87.952	Mustela_putorius_furo
ENSUAMG00000028270	-	95	78.743	ENSOARG00000003770	-	100	78.743	Ovis_aries
ENSUAMG00000028270	-	90	55.130	ENSPPAG00000037706	-	87	52.778	Pan_paniscus
ENSUAMG00000028270	-	90	58.784	ENSPSIG00000004614	-	97	58.784	Pelodiscus_sinensis
ENSUAMG00000028270	-	90	53.960	ENSSBOG00000022380	-	84	54.737	Saimiri_boliviensis_boliviensis
ENSUAMG00000028270	-	99	75.662	ENSSSCG00000031774	-	96	75.662	Sus_scrofa
ENSUAMG00000028270	-	96	68.730	ENSUMAG00000004054	-	99	69.113	Ursus_maritimus
ENSUAMG00000028270	-	96	63.089	ENSUMAG00000004061	-	100	61.807	Ursus_maritimus
ENSUAMG00000028270	-	89	65.714	ENSVVUG00000002085	-	91	66.500	Vulpes_vulpes
ENSUAMG00000028270	-	96	90.846	ENSVVUG00000001996	-	99	90.846	Vulpes_vulpes