EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000028387 (Gene tree)
Gene ID: -
Gene Symbol: DDX54
Alias: APR-5|DP97|MGC2835
Full Name: DEAD-box helicase 54
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 27355 bases
Position: chrLZNR01001437.1:158811-186165
Accession: 20084
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000037502	DBP10CT	PF08147.12	2.4e-18	1	1
ENSUAMP00000037500	DBP10CT	PF08147.12	2.6e-18	1	1
ENSUAMP00000037504	DBP10CT	PF08147.12	2.7e-18	1	1
ENSUAMP00000037501	DBP10CT	PF08147.12	2.7e-18	1	1
ENSUAMP00000037503	DBP10CT	PF08147.12	3.1e-16	1	1
ENSUAMP00000037504	ResIII	PF04851.15	2.3e-06	1	1
ENSUAMP00000037502	ResIII	PF04851.15	3e-06	1	1
ENSUAMP00000037500	ResIII	PF04851.15	3.3e-06	1	1
ENSUAMP00000037501	ResIII	PF04851.15	3.4e-06	1	1
ENSUAMP00000037503	ResIII	PF04851.15	3.5e-06	1	1
ENSUAMP00000037504	DEAD	PF00270.29	2.1e-50	1	1
ENSUAMP00000037503	DEAD	PF00270.29	2.7e-50	1	1
ENSUAMP00000037502	DEAD	PF00270.29	2.9e-50	1	1
ENSUAMP00000037500	DEAD	PF00270.29	3.2e-50	1	1
ENSUAMP00000037501	DEAD	PF00270.29	3.4e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000041742	DDX54-204	2532	-	ENSUAMP00000037503	843 (aa)	-	-
ENSUAMT00000041741	DDX54-203	2643	-	ENSUAMP00000037502	880 (aa)	-	-
ENSUAMT00000041739	DDX54-201	2745	-	ENSUAMP00000037500	914 (aa)	-	-
ENSUAMT00000041743	DDX54-205	2316	-	ENSUAMP00000037504	771 (aa)	-	-
ENSUAMT00000041740	DDX54-202	2775	-	ENSUAMP00000037501	924 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000028387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000028387's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000028387	DDX54	51	32.976	ENSUAMG00000000177	-	59	35.809
ENSUAMG00000028387	DDX54	51	31.579	ENSUAMG00000013185	DDX3X	55	33.514

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000028387	DDX54	100	88.889	ENSG00000123064	DDX54	100	95.673	Homo_sapiens
ENSUAMG00000028387	DDX54	98	61.294	ENSAPOG00000008602	ddx54	98	61.583	Acanthochromis_polyacanthus
ENSUAMG00000028387	DDX54	97	95.708	ENSAMEG00000008775	DDX54	97	96.262	Ailuropoda_melanoleuca
ENSUAMG00000028387	DDX54	99	62.283	ENSACIG00000019104	ddx54	97	61.922	Amphilophus_citrinellus
ENSUAMG00000028387	DDX54	98	60.424	ENSAOCG00000008449	ddx54	98	61.072	Amphiprion_ocellaris
ENSUAMG00000028387	DDX54	98	60.424	ENSAPEG00000014287	ddx54	98	61.072	Amphiprion_percula
ENSUAMG00000028387	DDX54	99	60.976	ENSATEG00000018529	ddx54	97	60.895	Anabas_testudineus
ENSUAMG00000028387	DDX54	99	71.161	ENSAPLG00000013191	DDX54	100	70.925	Anas_platyrhynchos
ENSUAMG00000028387	DDX54	99	69.288	ENSACAG00000004703	DDX54	98	68.516	Anolis_carolinensis
ENSUAMG00000028387	DDX54	100	78.202	ENSANAG00000032761	-	100	78.652	Aotus_nancymaae
ENSUAMG00000028387	DDX54	95	76.455	ENSANAG00000032241	-	95	78.460	Aotus_nancymaae
ENSUAMG00000028387	DDX54	100	60.819	ENSACLG00000013176	ddx54	98	61.899	Astatotilapia_calliptera
ENSUAMG00000028387	DDX54	99	61.481	ENSAMXG00000009189	ddx54	97	61.039	Astyanax_mexicanus
ENSUAMG00000028387	DDX54	100	88.462	ENSBTAG00000011930	DDX54	97	86.909	Bos_taurus
ENSUAMG00000028387	DDX54	93	45.078	WBGene00022378	Y94H6A.5	92	45.725	Caenorhabditis_elegans
ENSUAMG00000028387	DDX54	93	87.790	ENSCJAG00000010039	DDX54	96	81.562	Callithrix_jacchus
ENSUAMG00000028387	DDX54	65	91.449	ENSCAFG00000009029	DDX54	99	91.449	Canis_familiaris
ENSUAMG00000028387	DDX54	100	93.303	ENSCAFG00020017643	DDX54	100	93.303	Canis_lupus_dingo
ENSUAMG00000028387	DDX54	100	87.769	ENSCHIG00000026798	DDX54	100	87.995	Capra_hircus
ENSUAMG00000028387	DDX54	99	80.844	ENSTSYG00000007898	DDX54	94	84.606	Carlito_syrichta
ENSUAMG00000028387	DDX54	100	83.127	ENSCAPG00000001482	DDX54	95	86.414	Cavia_aperea
ENSUAMG00000028387	DDX54	100	87.359	ENSCPOG00000020649	DDX54	100	87.359	Cavia_porcellus
ENSUAMG00000028387	DDX54	100	88.435	ENSCCAG00000022625	DDX54	100	88.889	Cebus_capucinus
ENSUAMG00000028387	DDX54	100	89.342	ENSCATG00000041943	DDX54	100	89.342	Cercocebus_atys
ENSUAMG00000028387	DDX54	100	84.807	ENSCLAG00000010748	DDX54	100	84.800	Chinchilla_lanigera
ENSUAMG00000028387	DDX54	96	85.915	ENSCSAG00000002432	DDX54	93	85.915	Chlorocebus_sabaeus
ENSUAMG00000028387	DDX54	80	66.461	ENSCPBG00000017982	DDX54	85	66.615	Chrysemys_picta_bellii
ENSUAMG00000028387	DDX54	92	52.855	ENSCING00000004789	-	94	52.487	Ciona_intestinalis
ENSUAMG00000028387	DDX54	94	51.181	ENSCSAVG00000008916	-	98	68.373	Ciona_savignyi
ENSUAMG00000028387	DDX54	94	93.392	ENSCANG00000020637	DDX54	100	96.186	Colobus_angolensis_palliatus
ENSUAMG00000028387	DDX54	100	85.957	ENSCGRG00001014803	Ddx54	100	85.649	Cricetulus_griseus_chok1gshd
ENSUAMG00000028387	DDX54	100	85.569	ENSCGRG00000002827	Ddx54	100	85.227	Cricetulus_griseus_crigri
ENSUAMG00000028387	DDX54	98	59.437	ENSCSEG00000016462	ddx54	98	59.532	Cynoglossus_semilaevis
ENSUAMG00000028387	DDX54	99	60.613	ENSCVAG00000022404	ddx54	98	60.116	Cyprinodon_variegatus
ENSUAMG00000028387	DDX54	99	62.039	ENSDARG00000105286	ddx54	97	62.559	Danio_rerio
ENSUAMG00000028387	DDX54	100	85.844	ENSDNOG00000032913	DDX54	100	85.957	Dasypus_novemcinctus
ENSUAMG00000028387	DDX54	85	80.719	ENSDORG00000003399	Ddx54	95	83.546	Dipodomys_ordii
ENSUAMG00000028387	DDX54	94	43.110	FBgn0052344	CG32344	94	43.342	Drosophila_melanogaster
ENSUAMG00000028387	DDX54	56	91.971	ENSETEG00000008430	-	54	95.890	Echinops_telfairi
ENSUAMG00000028387	DDX54	80	60.930	ENSEBUG00000008886	ddx54	97	59.682	Eptatretus_burgeri
ENSUAMG00000028387	DDX54	100	80.225	ENSEASG00005009501	DDX54	100	81.445	Equus_asinus_asinus
ENSUAMG00000028387	DDX54	100	89.367	ENSECAG00000012890	DDX54	100	92.882	Equus_caballus
ENSUAMG00000028387	DDX54	67	94.937	ENSEEUG00000008296	-	74	94.937	Erinaceus_europaeus
ENSUAMG00000028387	DDX54	98	61.644	ENSELUG00000013533	ddx54	98	62.000	Esox_lucius
ENSUAMG00000028387	DDX54	100	90.590	ENSFCAG00000027806	DDX54	100	91.383	Felis_catus
ENSUAMG00000028387	DDX54	97	72.046	ENSFALG00000007737	DDX54	100	72.046	Ficedula_albicollis
ENSUAMG00000028387	DDX54	91	90.646	ENSFDAG00000019953	DDX54	99	90.598	Fukomys_damarensis
ENSUAMG00000028387	DDX54	99	60.763	ENSFHEG00000018425	ddx54	98	60.303	Fundulus_heteroclitus
ENSUAMG00000028387	DDX54	95	61.240	ENSGMOG00000011746	ddx54	97	60.292	Gadus_morhua
ENSUAMG00000028387	DDX54	99	71.286	ENSGALG00000007490	DDX54	97	71.464	Gallus_gallus
ENSUAMG00000028387	DDX54	99	61.568	ENSGAFG00000010336	ddx54	97	60.190	Gambusia_affinis
ENSUAMG00000028387	DDX54	99	57.794	ENSGACG00000016793	ddx54	97	56.946	Gasterosteus_aculeatus
ENSUAMG00000028387	DDX54	99	70.213	ENSGAGG00000022803	DDX54	100	70.633	Gopherus_agassizii
ENSUAMG00000028387	DDX54	100	88.901	ENSGGOG00000010414	DDX54	100	87.995	Gorilla_gorilla
ENSUAMG00000028387	DDX54	100	86.863	ENSHGLG00000014411	DDX54	100	86.863	Heterocephalus_glaber_female
ENSUAMG00000028387	DDX54	100	86.961	ENSHGLG00100018511	DDX54	100	86.961	Heterocephalus_glaber_male
ENSUAMG00000028387	DDX54	99	60.741	ENSHCOG00000019287	ddx54	98	60.915	Hippocampus_comes
ENSUAMG00000028387	DDX54	99	60.245	ENSIPUG00000015556	Ddx54	97	60.468	Ictalurus_punctatus
ENSUAMG00000028387	DDX54	94	83.979	ENSSTOG00000004068	DDX54	100	88.243	Ictidomys_tridecemlineatus
ENSUAMG00000028387	DDX54	99	86.697	ENSJJAG00000015712	Ddx54	100	87.229	Jaculus_jaculus
ENSUAMG00000028387	DDX54	100	59.721	ENSKMAG00000017520	ddx54	98	59.579	Kryptolebias_marmoratus
ENSUAMG00000028387	DDX54	99	59.902	ENSLBEG00000019480	ddx54	98	59.212	Labrus_bergylta
ENSUAMG00000028387	DDX54	98	66.127	ENSLACG00000008944	DDX54	95	65.529	Latimeria_chalumnae
ENSUAMG00000028387	DDX54	99	64.794	ENSLOCG00000008485	ddx54	98	63.743	Lepisosteus_oculatus
ENSUAMG00000028387	DDX54	95	73.317	ENSLAFG00000027782	DDX54	100	75.802	Loxodonta_africana
ENSUAMG00000028387	DDX54	100	89.468	ENSMFAG00000043636	DDX54	100	89.581	Macaca_fascicularis
ENSUAMG00000028387	DDX54	100	87.896	ENSMMUG00000021795	DDX54	100	88.235	Macaca_mulatta
ENSUAMG00000028387	DDX54	100	81.222	ENSMNEG00000043605	DDX54	100	81.561	Macaca_nemestrina
ENSUAMG00000028387	DDX54	99	83.560	ENSMLEG00000038981	DDX54	99	83.787	Mandrillus_leucophaeus
ENSUAMG00000028387	DDX54	99	61.050	ENSMAMG00000012784	ddx54	98	60.606	Mastacembelus_armatus
ENSUAMG00000028387	DDX54	99	62.579	ENSMZEG00005018773	ddx54	98	61.593	Maylandia_zebra
ENSUAMG00000028387	DDX54	99	69.155	ENSMGAG00000009183	DDX54	100	69.708	Meleagris_gallopavo
ENSUAMG00000028387	DDX54	100	85.051	ENSMAUG00000011051	Ddx54	100	85.194	Mesocricetus_auratus
ENSUAMG00000028387	DDX54	100	86.863	ENSMICG00000012217	DDX54	100	87.500	Microcebus_murinus
ENSUAMG00000028387	DDX54	100	86.183	ENSMOCG00000010835	Ddx54	100	85.421	Microtus_ochrogaster
ENSUAMG00000028387	DDX54	97	62.078	ENSMMOG00000009634	ddx54	97	59.762	Mola_mola
ENSUAMG00000028387	DDX54	99	76.090	ENSMODG00000003413	DDX54	99	76.077	Monodelphis_domestica
ENSUAMG00000028387	DDX54	99	61.805	ENSMALG00000022098	ddx54	98	60.819	Monopterus_albus
ENSUAMG00000028387	DDX54	100	84.163	MGP_CAROLIEiJ_G0027665	Ddx54	100	84.528	Mus_caroli
ENSUAMG00000028387	DDX54	100	83.446	ENSMUSG00000029599	Ddx54	100	84.169	Mus_musculus
ENSUAMG00000028387	DDX54	100	84.842	MGP_PahariEiJ_G0024247	Ddx54	100	84.642	Mus_pahari
ENSUAMG00000028387	DDX54	100	83.878	MGP_SPRETEiJ_G0028665	Ddx54	100	84.205	Mus_spretus
ENSUAMG00000028387	DDX54	100	92.072	ENSMPUG00000002574	DDX54	100	91.393	Mustela_putorius_furo
ENSUAMG00000028387	DDX54	50	68.357	ENSMLUG00000029964	-	99	71.463	Myotis_lucifugus
ENSUAMG00000028387	DDX54	100	86.183	ENSNGAG00000021313	Ddx54	100	86.070	Nannospalax_galili
ENSUAMG00000028387	DDX54	68	80.447	ENSNBRG00000005588	ddx54	73	78.517	Neolamprologus_brichardi
ENSUAMG00000028387	DDX54	100	88.322	ENSNLEG00000000162	DDX54	100	88.435	Nomascus_leucogenys
ENSUAMG00000028387	DDX54	86	77.114	ENSMEUG00000015392	DDX54	98	79.529	Notamacropus_eugenii
ENSUAMG00000028387	DDX54	92	89.744	ENSOPRG00000012000	DDX54	90	89.744	Ochotona_princeps
ENSUAMG00000028387	DDX54	100	84.050	ENSODEG00000014863	DDX54	100	84.050	Octodon_degus
ENSUAMG00000028387	DDX54	100	84.972	ENSOCUG00000008932	DDX54	100	83.860	Oryctolagus_cuniculus
ENSUAMG00000028387	DDX54	100	59.676	ENSORLG00000007385	ddx54	100	58.810	Oryzias_latipes
ENSUAMG00000028387	DDX54	100	60.047	ENSORLG00020000858	ddx54	100	59.773	Oryzias_latipes_hni
ENSUAMG00000028387	DDX54	100	59.676	ENSORLG00015006956	ddx54	100	59.070	Oryzias_latipes_hsok
ENSUAMG00000028387	DDX54	97	60.556	ENSOMEG00000003663	ddx54	98	60.941	Oryzias_melastigma
ENSUAMG00000028387	DDX54	100	88.662	ENSOGAG00000004210	DDX54	100	88.776	Otolemur_garnettii
ENSUAMG00000028387	DDX54	100	88.136	ENSOARG00000008363	DDX54	100	88.362	Ovis_aries
ENSUAMG00000028387	DDX54	100	87.698	ENSPPAG00000042178	DDX54	100	87.585	Pan_paniscus
ENSUAMG00000028387	DDX54	100	89.116	ENSPPRG00000005223	DDX54	100	89.444	Panthera_pardus
ENSUAMG00000028387	DDX54	81	73.924	ENSPTIG00000019728	DDX54	87	93.103	Panthera_tigris_altaica
ENSUAMG00000028387	DDX54	100	88.109	ENSPTRG00000005483	DDX54	100	87.995	Pan_troglodytes
ENSUAMG00000028387	DDX54	100	87.896	ENSPANG00000008883	DDX54	100	88.235	Papio_anubis
ENSUAMG00000028387	DDX54	99	62.731	ENSPKIG00000018272	ddx54	96	62.589	Paramormyrops_kingsleyae
ENSUAMG00000028387	DDX54	60	80.562	ENSPSIG00000005055	DDX54	96	80.687	Pelodiscus_sinensis
ENSUAMG00000028387	DDX54	99	59.924	ENSPMGG00000010988	ddx54	99	60.305	Periophthalmus_magnuspinnatus
ENSUAMG00000028387	DDX54	100	86.523	ENSPEMG00000016701	Ddx54	100	86.219	Peromyscus_maniculatus_bairdii
ENSUAMG00000028387	DDX54	50	79.016	ENSPMAG00000004337	ddx54	99	78.880	Petromyzon_marinus
ENSUAMG00000028387	DDX54	99	60.396	ENSPFOG00000019822	ddx54	97	60.870	Poecilia_formosa
ENSUAMG00000028387	DDX54	99	60.468	ENSPLAG00000004530	ddx54	97	60.752	Poecilia_latipinna
ENSUAMG00000028387	DDX54	99	60.099	ENSPMEG00000010803	ddx54	97	60.635	Poecilia_mexicana
ENSUAMG00000028387	DDX54	99	60.617	ENSPREG00000014372	ddx54	97	60.495	Poecilia_reticulata
ENSUAMG00000028387	DDX54	100	88.335	ENSPPYG00000004984	DDX54	100	88.448	Pongo_abelii
ENSUAMG00000028387	DDX54	100	82.540	ENSPCAG00000008462	DDX54	100	82.086	Procavia_capensis
ENSUAMG00000028387	DDX54	100	88.562	ENSPCOG00000006050	DDX54	100	87.995	Propithecus_coquereli
ENSUAMG00000028387	DDX54	93	94.502	ENSPVAG00000017347	DDX54	100	78.231	Pteropus_vampyrus
ENSUAMG00000028387	DDX54	99	58.736	ENSPNAG00000014459	ddx54	95	64.550	Pygocentrus_nattereri
ENSUAMG00000028387	DDX54	100	83.955	ENSRNOG00000001377	Ddx54	99	82.225	Rattus_norvegicus
ENSUAMG00000028387	DDX54	100	88.122	ENSRBIG00000032535	DDX54	100	88.235	Rhinopithecus_bieti
ENSUAMG00000028387	DDX54	100	83.277	ENSRROG00000029557	DDX54	100	83.616	Rhinopithecus_roxellana
ENSUAMG00000028387	DDX54	88	36.943	YDL031W	-	82	36.342	Saccharomyces_cerevisiae
ENSUAMG00000028387	DDX54	100	88.435	ENSSBOG00000028194	DDX54	100	88.776	Saimiri_boliviensis_boliviensis
ENSUAMG00000028387	DDX54	99	73.810	ENSSHAG00000015646	DDX54	100	74.362	Sarcophilus_harrisii
ENSUAMG00000028387	DDX54	99	62.052	ENSSFOG00015014981	ddx54	98	61.837	Scleropages_formosus
ENSUAMG00000028387	DDX54	97	59.868	ENSSMAG00000003210	ddx54	98	57.907	Scophthalmus_maximus
ENSUAMG00000028387	DDX54	97	59.530	ENSSDUG00000004474	ddx54	98	59.485	Seriola_dumerili
ENSUAMG00000028387	DDX54	97	59.282	ENSSLDG00000010380	ddx54	98	59.251	Seriola_lalandi_dorsalis
ENSUAMG00000028387	DDX54	98	70.469	ENSSPUG00000014141	DDX54	96	68.585	Sphenodon_punctatus
ENSUAMG00000028387	DDX54	97	61.727	ENSSPAG00000022918	ddx54	97	61.091	Stegastes_partitus
ENSUAMG00000028387	DDX54	100	89.128	ENSSSCG00000009876	DDX54	100	89.468	Sus_scrofa
ENSUAMG00000028387	DDX54	98	70.574	ENSTGUG00000009126	DDX54	100	70.210	Taeniopygia_guttata
ENSUAMG00000028387	DDX54	99	60.049	ENSTRUG00000014939	ddx54	97	60.303	Takifugu_rubripes
ENSUAMG00000028387	DDX54	99	61.042	ENSTNIG00000009037	ddx54	97	61.268	Tetraodon_nigroviridis
ENSUAMG00000028387	DDX54	82	92.683	ENSTBEG00000003783	DDX54	78	93.103	Tupaia_belangeri
ENSUAMG00000028387	DDX54	100	86.281	ENSTTRG00000016678	DDX54	100	86.508	Tursiops_truncatus
ENSUAMG00000028387	DDX54	85	97.980	ENSUMAG00000010245	DDX54	96	99.744	Ursus_maritimus
ENSUAMG00000028387	DDX54	100	93.303	ENSVVUG00000010212	DDX54	100	93.303	Vulpes_vulpes
ENSUAMG00000028387	DDX54	99	63.941	ENSXETG00000016410	ddx54	96	65.079	Xenopus_tropicalis
ENSUAMG00000028387	DDX54	99	61.713	ENSXCOG00000002909	ddx54	97	60.890	Xiphophorus_couchianus
ENSUAMG00000028387	DDX54	99	60.471	ENSXMAG00000005312	ddx54	97	60.377	Xiphophorus_maculatus