EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSUMAG00000000272 (Gene tree)
Gene ID
103656665
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Ursus_maritimus
Status
putative
Strand
Plus strand
Length
7919 bases
Position
chrKK499733.1:923341-931259
Accession
17042
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSUMAP00000000306RRM_1PF00076.222.3e-4312
ENSUMAP00000000306RRM_1PF00076.222.3e-4322
ENSUMAP00000000381RRM_1PF00076.225.4e-3812
ENSUMAP00000000381RRM_1PF00076.225.4e-3822
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSUMAT00000000565PUF60-2021884-ENSUMAP00000000381454 (aa)--
ENSUMAT00000000481PUF60-2011656-ENSUMAP00000000306551 (aa)--
Gene Model
Click here to download ENSUMAG00000000272's gene model file
Pathways
Pathway IDPathway NameSource
umr03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000000272's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSUMAG00000000272PUF609994.192ENSG00000179950PUF609798.471Homo_sapiens
ENSUMAG00000000272PUF609480.492ENSAPOG00000001713puf60b9980.682Acanthochromis_polyacanthus
ENSUMAG00000000272PUF609994.150ENSAMEG00000006406PUF609594.297Ailuropoda_melanoleuca
ENSUMAG00000000272PUF609272.361ENSACIG00000003263-9973.180Amphilophus_citrinellus
ENSUMAG00000000272PUF609280.230ENSACIG00000021705puf60b10080.422Amphilophus_citrinellus
ENSUMAG00000000272PUF609380.455ENSAOCG00000005395puf60b10081.382Amphiprion_ocellaris
ENSUMAG00000000272PUF609376.236ENSAOCG00000015558-9976.996Amphiprion_ocellaris
ENSUMAG00000000272PUF609475.000ENSAPEG00000011923puf60b9975.189Amphiprion_percula
ENSUMAG00000000272PUF609272.340ENSAPEG00000001836-9972.169Amphiprion_percula
ENSUMAG00000000272PUF609480.303ENSATEG00000001730puf60b9980.492Anabas_testudineus
ENSUMAG00000000272PUF609376.190ENSATEG00000006303-9976.762Anabas_testudineus
ENSUMAG00000000272PUF609393.103ENSAPLG00000010150PUF6010093.295Anas_platyrhynchos
ENSUMAG00000000272PUF609391.221ENSACAG00000001645PUF609791.082Anolis_carolinensis
ENSUMAG00000000272PUF6010092.679ENSANAG00000018626PUF6010094.767Aotus_nancymaae
ENSUMAG00000000272PUF609280.230ENSACLG00000004462puf60b10080.422Astatotilapia_calliptera
ENSUMAG00000000272PUF609379.065ENSAMXG00000036570puf60a10076.545Astyanax_mexicanus
ENSUMAG00000000272PUF608084.426ENSAMXG00000041030puf60b10075.568Astyanax_mexicanus
ENSUMAG00000000272PUF609993.682ENSBTAG00000037493PUF609994.828Bos_taurus
ENSUMAG00000000272PUF606950.690WBGene00004389rnp-68649.679Caenorhabditis_elegans
ENSUMAG00000000272PUF609993.525ENSCJAG00000021485PUF609895.019Callithrix_jacchus
ENSUMAG00000000272PUF6010093.929ENSCAFG00000001400PUF6010093.571Canis_familiaris
ENSUMAG00000000272PUF609994.384ENSCAFG00020018754PUF609994.928Canis_lupus_dingo
ENSUMAG00000000272PUF6010094.086ENSCHIG00000001618PUF609394.265Capra_hircus
ENSUMAG00000000272PUF609993.525ENSTSYG00000011912PUF6010095.155Carlito_syrichta
ENSUMAG00000000272PUF609988.689ENSCPOG00000014613PUF609589.118Cavia_porcellus
ENSUMAG00000000272PUF6010092.857ENSCCAG00000007744PUF609894.828Cebus_capucinus
ENSUMAG00000000272PUF609994.192ENSCATG00000035405PUF609894.828Cercocebus_atys
ENSUMAG00000000272PUF609993.525ENSCLAG00000009154PUF609494.707Chinchilla_lanigera
ENSUMAG00000000272PUF609294.767ENSCSAG00000008878PUF6010094.767Chlorocebus_sabaeus
ENSUMAG00000000272PUF609393.077ENSCPBG00000005595PUF609893.295Chrysemys_picta_bellii
ENSUMAG00000000272PUF607257.227ENSCING00000002156-8758.407Ciona_intestinalis
ENSUMAG00000000272PUF609345.522ENSCING00000008436-9845.849Ciona_intestinalis
ENSUMAG00000000272PUF609047.211ENSCSAVG00000004765-9746.800Ciona_savignyi
ENSUMAG00000000272PUF609050.958ENSCSAVG00000001385-9951.346Ciona_savignyi
ENSUMAG00000000272PUF608798.485ENSCANG00000041843PUF609598.485Colobus_angolensis_palliatus
ENSUMAG00000000272PUF609992.806ENSCGRG00001017442Puf609493.951Cricetulus_griseus_chok1gshd
ENSUMAG00000000272PUF609593.750ENSCGRG00000003717Puf609493.939Cricetulus_griseus_crigri
ENSUMAG00000000272PUF609777.514ENSCSEG00000019887puf60b9379.696Cynoglossus_semilaevis
ENSUMAG00000000272PUF609267.113ENSCSEG00000014845-8970.363Cynoglossus_semilaevis
ENSUMAG00000000272PUF608474.526ENSCVAG00000001560-9874.473Cyprinodon_variegatus
ENSUMAG00000000272PUF609279.463ENSCVAG00000009386puf60b10080.806Cyprinodon_variegatus
ENSUMAG00000000272PUF609281.629ENSDARG00000032175puf60a9994.043Danio_rerio
ENSUMAG00000000272PUF609276.660ENSDARG00000001241puf60b9996.032Danio_rerio
ENSUMAG00000000272PUF609676.481ENSDNOG00000043278PUF609576.735Dasypus_novemcinctus
ENSUMAG00000000272PUF609994.192ENSDORG00000004585Puf609694.518Dipodomys_ordii
ENSUMAG00000000272PUF607460.396FBgn0028577hfp8060.396Drosophila_melanogaster
ENSUMAG00000000272PUF609065.209ENSEBUG00000005470-8865.010Eptatretus_burgeri
ENSUMAG00000000272PUF609456.471ENSEBUG00000014291puf60b8559.628Eptatretus_burgeri
ENSUMAG00000000272PUF609994.384ENSEASG00005009695PUF609994.928Equus_asinus_asinus
ENSUMAG00000000272PUF609994.213ENSECAG00000024681PUF609795.211Equus_caballus
ENSUMAG00000000272PUF609478.368ENSELUG00000006507puf60b9975.641Esox_lucius
ENSUMAG00000000272PUF609678.532ENSELUG00000018443-9880.114Esox_lucius
ENSUMAG00000000272PUF609993.345ENSFCAG00000001045PUF6010094.380Felis_catus
ENSUMAG00000000272PUF609380.460ENSFALG00000001136PUF609881.801Ficedula_albicollis
ENSUMAG00000000272PUF609993.165ENSFDAG00000017177PUF609494.329Fukomys_damarensis
ENSUMAG00000000272PUF608874.096ENSFHEG00000021687PUF6010075.051Fundulus_heteroclitus
ENSUMAG00000000272PUF609379.127ENSFHEG00000020046puf60b10081.190Fundulus_heteroclitus
ENSUMAG00000000272PUF609366.729ENSGMOG00000006392puf60b10066.165Gadus_morhua
ENSUMAG00000000272PUF607597.384ENSGALG00000039901PUF609497.384Gallus_gallus
ENSUMAG00000000272PUF609276.848ENSGAFG00000004334-9976.265Gambusia_affinis
ENSUMAG00000000272PUF609378.368ENSGAFG00000021040puf60b10080.614Gambusia_affinis
ENSUMAG00000000272PUF609368.242ENSGACG00000004717puf60b9867.742Gasterosteus_aculeatus
ENSUMAG00000000272PUF609370.428ENSGACG00000001484-10069.650Gasterosteus_aculeatus
ENSUMAG00000000272PUF609393.077ENSGAGG00000013289PUF609293.295Gopherus_agassizii
ENSUMAG00000000272PUF609994.192ENSGGOG00000004646PUF609894.828Gorilla_gorilla
ENSUMAG00000000272PUF609376.850ENSHBUG00000009634-9977.230Haplochromis_burtoni
ENSUMAG00000000272PUF609379.507ENSHBUG00000015118puf60b10080.422Haplochromis_burtoni
ENSUMAG00000000272PUF609993.165ENSHGLG00000006111PUF609494.329Heterocephalus_glaber_female
ENSUMAG00000000272PUF609993.165ENSHGLG00100012362PUF609494.329Heterocephalus_glaber_male
ENSUMAG00000000272PUF609377.532ENSHCOG00000015541puf60b10076.937Hippocampus_comes
ENSUMAG00000000272PUF609167.331ENSHCOG00000000378-9965.458Hippocampus_comes
ENSUMAG00000000272PUF609277.127ENSIPUG00000002453puf60a9977.694Ictalurus_punctatus
ENSUMAG00000000272PUF609277.213ENSIPUG00000004660puf60b9976.894Ictalurus_punctatus
ENSUMAG00000000272PUF609994.909ENSSTOG00000025037PUF609994.909Ictidomys_tridecemlineatus
ENSUMAG00000000272PUF609993.502ENSJJAG00000001076Puf609494.329Jaculus_jaculus
ENSUMAG00000000272PUF609273.535ENSKMAG00000010106-10073.724Kryptolebias_marmoratus
ENSUMAG00000000272PUF609279.846ENSKMAG00000016745puf60b10081.190Kryptolebias_marmoratus
ENSUMAG00000000272PUF609683.117ENSLBEG00000012505puf60b10083.117Labrus_bergylta
ENSUMAG00000000272PUF607091.692ENSLACG00000005456PUF608991.692Latimeria_chalumnae
ENSUMAG00000000272PUF609584.369ENSLOCG00000010106puf60b9984.221Lepisosteus_oculatus
ENSUMAG00000000272PUF6010091.577ENSLAFG00000022929PUF609593.195Loxodonta_africana
ENSUMAG00000000272PUF609994.192ENSMFAG00000043373PUF609994.828Macaca_fascicularis
ENSUMAG00000000272PUF609994.022ENSMMUG00000013558PUF609894.828Macaca_mulatta
ENSUMAG00000000272PUF609994.192ENSMNEG00000031099PUF609894.828Macaca_nemestrina
ENSUMAG00000000272PUF609294.767ENSMLEG00000040009PUF6010094.767Mandrillus_leucophaeus
ENSUMAG00000000272PUF609377.419ENSMAMG00000019476-9977.230Mastacembelus_armatus
ENSUMAG00000000272PUF609479.887ENSMAMG00000010394puf60b10078.879Mastacembelus_armatus
ENSUMAG00000000272PUF609280.230ENSMZEG00005018515puf60b10080.422Maylandia_zebra
ENSUMAG00000000272PUF609377.040ENSMZEG00005019425-9977.419Maylandia_zebra
ENSUMAG00000000272PUF609393.103ENSMGAG00000013070PUF609597.965Meleagris_gallopavo
ENSUMAG00000000272PUF608876.613ENSMAUG00000018549-9577.033Mesocricetus_auratus
ENSUMAG00000000272PUF607998.333ENSMAUG00000014267-9896.500Mesocricetus_auratus
ENSUMAG00000000272PUF609994.909ENSMICG00000012226PUF609995.211Microcebus_murinus
ENSUMAG00000000272PUF609992.986ENSMOCG00000018780Puf609594.140Microtus_ochrogaster
ENSUMAG00000000272PUF609468.893ENSMMOG00000018059-9975.751Mola_mola
ENSUMAG00000000272PUF609280.614ENSMMOG00000004217puf60b10080.806Mola_mola
ENSUMAG00000000272PUF609992.909ENSMODG00000009161PUF609694.518Monodelphis_domestica
ENSUMAG00000000272PUF609474.286ENSMALG00000006797puf60b9974.286Monopterus_albus
ENSUMAG00000000272PUF609376.806ENSMALG00000000200-9975.425Monopterus_albus
ENSUMAG00000000272PUF609992.806MGP_CAROLIEiJ_G0019910Puf609493.951Mus_caroli
ENSUMAG00000000272PUF609992.806ENSMUSG00000002524Puf609493.951Mus_musculus
ENSUMAG00000000272PUF609992.806MGP_PahariEiJ_G0019920Puf609493.951Mus_pahari
ENSUMAG00000000272PUF609992.806MGP_SPRETEiJ_G0020812Puf609493.951Mus_spretus
ENSUMAG00000000272PUF609594.151ENSMPUG00000008137PUF609494.329Mustela_putorius_furo
ENSUMAG00000000272PUF609387.356ENSMLUG00000013032-9887.548Myotis_lucifugus
ENSUMAG00000000272PUF6010095.144ENSMLUG00000000238-9995.144Myotis_lucifugus
ENSUMAG00000000272PUF609993.165ENSNGAG00000000712Puf6010094.186Nannospalax_galili
ENSUMAG00000000272PUF609374.307ENSNBRG00000017223-9977.757Neolamprologus_brichardi
ENSUMAG00000000272PUF608782.544ENSNBRG00000013047puf60b9282.793Neolamprologus_brichardi
ENSUMAG00000000272PUF609994.192ENSNLEG00000002156PUF609894.828Nomascus_leucogenys
ENSUMAG00000000272PUF607098.635ENSOPRG00000002147PUF607598.635Ochotona_princeps
ENSUMAG00000000272PUF6073100.000ENSODEG00000014024-98100.000Octodon_degus
ENSUMAG00000000272PUF609071.032ENSODEG00000015513-9968.939Octodon_degus
ENSUMAG00000000272PUF609477.273ENSONIG00000014030-9977.273Oreochromis_niloticus
ENSUMAG00000000272PUF609479.545ENSONIG00000006247puf60b9979.735Oreochromis_niloticus
ENSUMAG00000000272PUF609175.000ENSOANG00000006962PUF609974.853Ornithorhynchus_anatinus
ENSUMAG00000000272PUF609379.696ENSORLG00000012279puf60b10080.038Oryzias_latipes
ENSUMAG00000000272PUF609274.053ENSORLG00000028655-9974.335Oryzias_latipes
ENSUMAG00000000272PUF609379.696ENSORLG00020007333puf6010080.038Oryzias_latipes_hni
ENSUMAG00000000272PUF609373.962ENSORLG00020018144-9874.242Oryzias_latipes_hni
ENSUMAG00000000272PUF609378.828ENSORLG00015007718puf60b10079.924Oryzias_latipes_hsok
ENSUMAG00000000272PUF609374.194ENSORLG00015016833-9874.476Oryzias_latipes_hsok
ENSUMAG00000000272PUF609377.138ENSOMEG00000001643puf60b9980.448Oryzias_melastigma
ENSUMAG00000000272PUF609374.811ENSOMEG00000022185-9874.953Oryzias_melastigma
ENSUMAG00000000272PUF6010094.097ENSOGAG00000006259PUF609594.707Otolemur_garnettii
ENSUMAG00000000272PUF609492.500ENSOARG00000016235PUF609992.500Ovis_aries
ENSUMAG00000000272PUF609994.192ENSPPAG00000029933PUF609894.828Pan_paniscus
ENSUMAG00000000272PUF609993.345ENSPPRG00000003257PUF6010094.380Panthera_pardus
ENSUMAG00000000272PUF609990.054ENSPTIG00000009795PUF609992.337Panthera_tigris_altaica
ENSUMAG00000000272PUF6010094.097ENSPTRG00000043963-10094.275Pan_troglodytes
ENSUMAG00000000272PUF609994.011ENSPTRG00000020670PUF609894.253Pan_troglodytes
ENSUMAG00000000272PUF609994.192ENSPANG00000021936PUF609894.828Papio_anubis
ENSUMAG00000000272PUF609380.718ENSPKIG00000004295puf60a9990.882Paramormyrops_kingsleyae
ENSUMAG00000000272PUF609381.939ENSPKIG00000012204puf60b10082.885Paramormyrops_kingsleyae
ENSUMAG00000000272PUF609492.925ENSPSIG00000004679PUF609993.117Pelodiscus_sinensis
ENSUMAG00000000272PUF609279.198ENSPMGG00000013444puf60b9979.389Periophthalmus_magnuspinnatus
ENSUMAG00000000272PUF609992.986ENSPEMG00000008820Puf609494.140Peromyscus_maniculatus_bairdii
ENSUMAG00000000272PUF609891.408ENSPCIG00000020270PUF609994.818Phascolarctos_cinereus
ENSUMAG00000000272PUF609379.127ENSPFOG00000019217puf60b10077.213Poecilia_formosa
ENSUMAG00000000272PUF609275.915ENSPFOG00000011118-9776.448Poecilia_formosa
ENSUMAG00000000272PUF609275.915ENSPLAG00000017025-9076.062Poecilia_latipinna
ENSUMAG00000000272PUF609279.846ENSPLAG00000010754puf60b10081.190Poecilia_latipinna
ENSUMAG00000000272PUF609379.127ENSPMEG00000000838puf60b10081.190Poecilia_mexicana
ENSUMAG00000000272PUF609275.915ENSPMEG00000009767-9076.448Poecilia_mexicana
ENSUMAG00000000272PUF609376.895ENSPREG00000005440puf60b9881.377Poecilia_reticulata
ENSUMAG00000000272PUF609291.080ENSPPYG00000018951-9791.080Pongo_abelii
ENSUMAG00000000272PUF608798.737ENSPCAG00000014837PUF609598.737Procavia_capensis
ENSUMAG00000000272PUF609994.033ENSPCOG00000027981PUF609995.019Propithecus_coquereli
ENSUMAG00000000272PUF6092100.000ENSPVAG00000016167PUF6081100.000Pteropus_vampyrus
ENSUMAG00000000272PUF609377.040ENSPNYG00000004273-9977.419Pundamilia_nyererei
ENSUMAG00000000272PUF609280.230ENSPNYG00000002556puf60b10080.422Pundamilia_nyererei
ENSUMAG00000000272PUF609377.273ENSPNAG00000019909puf60a9977.127Pygocentrus_nattereri
ENSUMAG00000000272PUF609475.047ENSPNAG00000019415puf60b9174.763Pygocentrus_nattereri
ENSUMAG00000000272PUF609892.793ENSRNOG00000009960Puf609493.951Rattus_norvegicus
ENSUMAG00000000272PUF609994.192ENSRBIG00000035274PUF609894.828Rhinopithecus_bieti
ENSUMAG00000000272PUF609994.192ENSRROG00000029360PUF609994.828Rhinopithecus_roxellana
ENSUMAG00000000272PUF609891.423ENSSBOG00000027089PUF609894.605Saimiri_boliviensis_boliviensis
ENSUMAG00000000272PUF608798.990ENSSHAG00000006668PUF609293.291Sarcophilus_harrisii
ENSUMAG00000000272PUF609376.812ENSSFOG00015019371puf60a9881.891Scleropages_formosus
ENSUMAG00000000272PUF609282.205ENSSFOG00015019619puf60b9983.878Scleropages_formosus
ENSUMAG00000000272PUF606992.580ENSSMAG00000016381puf60b7691.304Scophthalmus_maximus
ENSUMAG00000000272PUF609378.253ENSSDUG00000009935puf60b9981.670Seriola_dumerili
ENSUMAG00000000272PUF609375.000ENSSDUG00000007048-9875.573Seriola_dumerili
ENSUMAG00000000272PUF609380.418ENSSLDG00000024011puf60b10079.065Seriola_lalandi_dorsalis
ENSUMAG00000000272PUF609275.332ENSSLDG00000007366-9975.901Seriola_lalandi_dorsalis
ENSUMAG00000000272PUF607683.237ENSSPUG00000013518PUF609483.526Sphenodon_punctatus
ENSUMAG00000000272PUF609276.908ENSSPAG00000020285-10077.672Stegastes_partitus
ENSUMAG00000000272PUF609378.189ENSSPAG00000012144puf60b10079.252Stegastes_partitus
ENSUMAG00000000272PUF609593.962ENSSSCG00000038800PUF6010088.913Sus_scrofa
ENSUMAG00000000272PUF609389.847ENSTGUG00000012797-10090.038Taeniopygia_guttata
ENSUMAG00000000272PUF609272.868ENSTRUG00000008843-10073.062Takifugu_rubripes
ENSUMAG00000000272PUF609479.167ENSTRUG00000005420puf60b10077.944Takifugu_rubripes
ENSUMAG00000000272PUF609469.888ENSTNIG00000003069-10073.423Tetraodon_nigroviridis
ENSUMAG00000000272PUF609479.167ENSTNIG00000013675puf60b10079.356Tetraodon_nigroviridis
ENSUMAG00000000272PUF607093.919ENSTBEG00000002751-9994.237Tupaia_belangeri
ENSUMAG00000000272PUF607682.707ENSTBEG00000001899-10076.901Tupaia_belangeri
ENSUMAG00000000272PUF609293.981ENSTTRG00000017088PUF6010094.175Tursiops_truncatus
ENSUMAG00000000272PUF609995.091ENSUAMG00000024917PUF609995.091Ursus_americanus
ENSUMAG00000000272PUF609995.091ENSVVUG00000022527PUF6010095.155Vulpes_vulpes
ENSUMAG00000000272PUF609489.122ENSXETG00000012469puf609989.313Xenopus_tropicalis
ENSUMAG00000000272PUF609276.583ENSXCOG00000012355puf60b10077.927Xiphophorus_couchianus
ENSUMAG00000000272PUF609472.952ENSXMAG00000010507-9972.381Xiphophorus_maculatus
ENSUMAG00000000272PUF609379.127ENSXMAG00000001862puf60b10081.190Xiphophorus_maculatus

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