EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000000505 (Gene tree)
Gene ID: 103667365
Gene Symbol: MSI2
Alias: -
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 381476 bases
Position: chrKK498618.1:14900186-15281661
Accession: 18585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000000373	RRM_1	PF00076.22	1.8e-22	1	2
ENSUMAP00000000373	RRM_1	PF00076.22	1.8e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000000557	MSI2-201	868	-	ENSUMAP00000000373	257 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000000505's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000000505's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000000505	MSI2	50	35.385	ENSUMAG00000015788	-	53	33.571
ENSUMAG00000000505	MSI2	53	49.265	ENSUMAG00000023918	HNRNPAB	81	47.712
ENSUMAG00000000505	MSI2	56	39.860	ENSUMAG00000001699	HNRNPA2B1	87	37.963
ENSUMAG00000000505	MSI2	54	41.844	ENSUMAG00000015686	-	83	41.830
ENSUMAG00000000505	MSI2	57	40.909	ENSUMAG00000005845	DAZAP1	54	40.909
ENSUMAG00000000505	MSI2	95	66.901	ENSUMAG00000006176	MSI1	83	66.901
ENSUMAG00000000505	MSI2	58	45.161	ENSUMAG00000008685	HNRNPD	71	45.161
ENSUMAG00000000505	MSI2	56	48.921	ENSUMAG00000008681	HNRNPDL	65	39.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000000505	MSI2	95	92.075	ENSG00000153944	MSI2	95	97.203	Homo_sapiens
ENSUMAG00000000505	MSI2	100	93.782	ENSAPOG00000001658	msi2a	89	92.213	Acanthochromis_polyacanthus
ENSUMAG00000000505	MSI2	95	86.219	ENSAMEG00000002697	MSI2	96	86.219	Ailuropoda_melanoleuca
ENSUMAG00000000505	MSI2	95	88.000	ENSACIG00000009475	msi2a	78	88.000	Amphilophus_citrinellus
ENSUMAG00000000505	MSI2	54	84.000	ENSAOCG00000014822	msi2a	58	84.000	Amphiprion_ocellaris
ENSUMAG00000000505	MSI2	95	85.227	ENSAPEG00000007706	msi2a	89	85.227	Amphiprion_percula
ENSUMAG00000000505	MSI2	95	85.283	ENSATEG00000003301	-	95	85.283	Anabas_testudineus
ENSUMAG00000000505	MSI2	100	93.782	ENSATEG00000010498	msi2a	89	92.213	Anabas_testudineus
ENSUMAG00000000505	MSI2	95	97.312	ENSACAG00000005452	MSI2	67	96.154	Anolis_carolinensis
ENSUMAG00000000505	MSI2	95	92.075	ENSANAG00000037827	MSI2	92	98.469	Aotus_nancymaae
ENSUMAG00000000505	MSI2	95	93.264	ENSACLG00000007752	msi2a	89	91.803	Astatotilapia_calliptera
ENSUMAG00000000505	MSI2	100	97.409	ENSAMXG00000010474	msi2b	96	94.553	Astyanax_mexicanus
ENSUMAG00000000505	MSI2	100	96.891	ENSAMXG00000032796	msi2a	90	87.594	Astyanax_mexicanus
ENSUMAG00000000505	MSI2	95	99.590	ENSBTAG00000004406	MSI2	97	92.086	Bos_taurus
ENSUMAG00000000505	MSI2	77	59.716	WBGene00003423	msi-1	74	59.716	Caenorhabditis_elegans
ENSUMAG00000000505	MSI2	95	92.075	ENSCJAG00000013998	MSI2	92	98.469	Callithrix_jacchus
ENSUMAG00000000505	MSI2	95	86.219	ENSCAFG00020025620	MSI2	73	98.469	Canis_lupus_dingo
ENSUMAG00000000505	MSI2	95	91.698	ENSCHIG00000016580	MSI2	90	91.698	Capra_hircus
ENSUMAG00000000505	MSI2	95	88.679	ENSCPOG00000034042	MSI2	94	88.679	Cavia_porcellus
ENSUMAG00000000505	MSI2	95	92.075	ENSCCAG00000033927	MSI2	92	98.469	Cebus_capucinus
ENSUMAG00000000505	MSI2	95	92.075	ENSCATG00000040879	MSI2	92	98.469	Cercocebus_atys
ENSUMAG00000000505	MSI2	95	86.219	ENSCLAG00000014325	MSI2	90	86.219	Chinchilla_lanigera
ENSUMAG00000000505	MSI2	95	92.075	ENSCSAG00000005633	MSI2	90	92.075	Chlorocebus_sabaeus
ENSUMAG00000000505	MSI2	95	68.302	ENSCHOG00000008660	MSI2	95	68.302	Choloepus_hoffmanni
ENSUMAG00000000505	MSI2	100	98.895	ENSCPBG00000009942	MSI2	91	91.633	Chrysemys_picta_bellii
ENSUMAG00000000505	MSI2	69	72.000	ENSCING00000018579	-	95	52.804	Ciona_intestinalis
ENSUMAG00000000505	MSI2	71	66.839	ENSCSAVG00000010397	-	75	62.441	Ciona_savignyi
ENSUMAG00000000505	MSI2	95	89.623	ENSCANG00000036414	MSI2	92	98.469	Colobus_angolensis_palliatus
ENSUMAG00000000505	MSI2	95	91.729	ENSCGRG00001013330	Msi2	90	91.729	Cricetulus_griseus_chok1gshd
ENSUMAG00000000505	MSI2	95	85.915	ENSCGRG00000003141	Msi2	96	85.915	Cricetulus_griseus_crigri
ENSUMAG00000000505	MSI2	84	72.727	ENSCSEG00000013557	msi2a	76	73.143	Cynoglossus_semilaevis
ENSUMAG00000000505	MSI2	95	76.136	ENSCSEG00000003266	-	87	76.136	Cynoglossus_semilaevis
ENSUMAG00000000505	MSI2	54	67.910	ENSCSEG00000013549	msi2a	88	67.910	Cynoglossus_semilaevis
ENSUMAG00000000505	MSI2	95	91.803	ENSCVAG00000017075	msi2a	89	91.803	Cyprinodon_variegatus
ENSUMAG00000000505	MSI2	95	96.891	ENSDARG00000032614	msi2b	100	98.020	Danio_rerio
ENSUMAG00000000505	MSI2	95	93.782	ENSDARG00000033901	msi2a	77	88.462	Danio_rerio
ENSUMAG00000000505	MSI2	95	92.075	ENSDNOG00000014501	MSI2	95	92.075	Dasypus_novemcinctus
ENSUMAG00000000505	MSI2	54	100.000	ENSDORG00000028440	-	100	100.000	Dipodomys_ordii
ENSUMAG00000000505	MSI2	84	78.453	ENSDORG00000005394	Msi2	79	79.006	Dipodomys_ordii
ENSUMAG00000000505	MSI2	96	55.333	FBgn0260943	Rbp6	90	67.347	Drosophila_melanogaster
ENSUMAG00000000505	MSI2	59	76.316	ENSETEG00000012450	-	64	76.316	Echinops_telfairi
ENSUMAG00000000505	MSI2	92	65.714	ENSEBUG00000006732	msi2a	83	65.714	Eptatretus_burgeri
ENSUMAG00000000505	MSI2	97	89.209	ENSEASG00005002965	MSI2	93	76.299	Equus_asinus_asinus
ENSUMAG00000000505	MSI2	97	89.147	ENSECAG00000011435	MSI2	94	80.328	Equus_caballus
ENSUMAG00000000505	MSI2	95	77.689	ENSEEUG00000007810	MSI2	100	77.689	Erinaceus_europaeus
ENSUMAG00000000505	MSI2	100	95.337	ENSELUG00000001361	msi2b	90	80.070	Esox_lucius
ENSUMAG00000000505	MSI2	97	96.373	ENSELUG00000011747	msi2a	89	86.415	Esox_lucius
ENSUMAG00000000505	MSI2	54	81.132	ENSFCAG00000033787	-	67	81.132	Felis_catus
ENSUMAG00000000505	MSI2	95	92.075	ENSFCAG00000041686	MSI2	92	98.469	Felis_catus
ENSUMAG00000000505	MSI2	95	86.219	ENSFDAG00000016118	MSI2	96	86.219	Fukomys_damarensis
ENSUMAG00000000505	MSI2	100	93.782	ENSFHEG00000000084	msi2a	83	94.118	Fundulus_heteroclitus
ENSUMAG00000000505	MSI2	51	94.444	ENSGMOG00000007596	-	80	94.444	Gadus_morhua
ENSUMAG00000000505	MSI2	100	83.860	ENSGALG00000005567	MSI2	90	84.452	Gallus_gallus
ENSUMAG00000000505	MSI2	95	76.208	ENSGAFG00000006974	msi2a	78	95.050	Gambusia_affinis
ENSUMAG00000000505	MSI2	95	98.964	ENSGAGG00000016542	MSI2	100	73.802	Gopherus_agassizii
ENSUMAG00000000505	MSI2	95	89.623	ENSGGOG00000013182	MSI2	92	97.970	Gorilla_gorilla
ENSUMAG00000000505	MSI2	100	93.264	ENSHBUG00000020800	msi2a	89	91.803	Haplochromis_burtoni
ENSUMAG00000000505	MSI2	95	75.265	ENSHGLG00000012444	MSI2	61	98.182	Heterocephalus_glaber_female
ENSUMAG00000000505	MSI2	82	79.897	ENSHGLG00100003744	MSI2	94	79.897	Heterocephalus_glaber_male
ENSUMAG00000000505	MSI2	54	100.000	ENSHGLG00100004028	-	87	100.000	Heterocephalus_glaber_male
ENSUMAG00000000505	MSI2	95	89.119	ENSHCOG00000017241	-	66	89.119	Hippocampus_comes
ENSUMAG00000000505	MSI2	95	93.264	ENSHCOG00000000266	msi2a	89	78.092	Hippocampus_comes
ENSUMAG00000000505	MSI2	100	97.409	ENSIPUG00000003732	msi2b	85	87.925	Ictalurus_punctatus
ENSUMAG00000000505	MSI2	95	96.373	ENSIPUG00000021097	msi2a	89	94.672	Ictalurus_punctatus
ENSUMAG00000000505	MSI2	95	88.679	ENSSTOG00000007884	MSI2	94	88.679	Ictidomys_tridecemlineatus
ENSUMAG00000000505	MSI2	82	82.796	ENSJJAG00000006292	-	93	82.796	Jaculus_jaculus
ENSUMAG00000000505	MSI2	54	100.000	ENSJJAG00000009467	-	100	100.000	Jaculus_jaculus
ENSUMAG00000000505	MSI2	100	93.264	ENSKMAG00000009494	msi2a	94	83.813	Kryptolebias_marmoratus
ENSUMAG00000000505	MSI2	100	93.782	ENSLBEG00000007061	msi2a	89	85.227	Labrus_bergylta
ENSUMAG00000000505	MSI2	95	86.010	ENSLBEG00000026223	-	85	74.180	Labrus_bergylta
ENSUMAG00000000505	MSI2	54	98.148	ENSLACG00000016798	MSI2	89	98.148	Latimeria_chalumnae
ENSUMAG00000000505	MSI2	95	96.891	ENSLOCG00000004675	msi2b	80	87.500	Lepisosteus_oculatus
ENSUMAG00000000505	MSI2	95	89.623	ENSMFAG00000003775	MSI2	92	98.469	Macaca_fascicularis
ENSUMAG00000000505	MSI2	95	89.623	ENSMMUG00000002069	MSI2	92	98.469	Macaca_mulatta
ENSUMAG00000000505	MSI2	95	92.075	ENSMNEG00000045275	MSI2	92	98.469	Macaca_nemestrina
ENSUMAG00000000505	MSI2	95	89.623	ENSMLEG00000033888	MSI2	92	98.469	Mandrillus_leucophaeus
ENSUMAG00000000505	MSI2	97	94.301	ENSMAMG00000002488	-	85	95.050	Mastacembelus_armatus
ENSUMAG00000000505	MSI2	100	93.782	ENSMAMG00000010503	msi2a	89	92.213	Mastacembelus_armatus
ENSUMAG00000000505	MSI2	100	93.264	ENSMZEG00005007676	msi2a	93	91.440	Maylandia_zebra
ENSUMAG00000000505	MSI2	95	85.915	ENSMAUG00000003862	Msi2	90	85.915	Mesocricetus_auratus
ENSUMAG00000000505	MSI2	95	70.741	ENSMICG00000032913	-	88	70.741	Microcebus_murinus
ENSUMAG00000000505	MSI2	100	92.446	ENSMICG00000013598	-	92	98.469	Microcebus_murinus
ENSUMAG00000000505	MSI2	95	86.219	ENSMOCG00000005820	Msi2	90	86.219	Microtus_ochrogaster
ENSUMAG00000000505	MSI2	95	93.782	ENSMMOG00000008348	msi2a	90	84.411	Mola_mola
ENSUMAG00000000505	MSI2	82	78.351	ENSMODG00000014790	MSI2	94	78.351	Monodelphis_domestica
ENSUMAG00000000505	MSI2	95	93.782	ENSMALG00000000071	msi2a	89	92.213	Monopterus_albus
ENSUMAG00000000505	MSI2	95	92.075	MGP_CAROLIEiJ_G0016948	Msi2	100	100.000	Mus_caroli
ENSUMAG00000000505	MSI2	95	92.075	ENSMUSG00000069769	Msi2	100	100.000	Mus_musculus
ENSUMAG00000000505	MSI2	95	92.075	MGP_PahariEiJ_G0018079	Msi2	100	100.000	Mus_pahari
ENSUMAG00000000505	MSI2	95	92.075	MGP_SPRETEiJ_G0017795	Msi2	100	100.000	Mus_spretus
ENSUMAG00000000505	MSI2	95	92.075	ENSMPUG00000015377	MSI2	93	92.075	Mustela_putorius_furo
ENSUMAG00000000505	MSI2	95	92.075	ENSMLUG00000007865	MSI2	93	92.075	Myotis_lucifugus
ENSUMAG00000000505	MSI2	95	86.219	ENSNGAG00000017807	Msi2	90	86.219	Nannospalax_galili
ENSUMAG00000000505	MSI2	95	93.264	ENSNBRG00000014596	msi2a	79	95.098	Neolamprologus_brichardi
ENSUMAG00000000505	MSI2	95	89.623	ENSNLEG00000008059	MSI2	95	98.469	Nomascus_leucogenys
ENSUMAG00000000505	MSI2	59	88.816	ENSOPRG00000000872	-	64	88.816	Ochotona_princeps
ENSUMAG00000000505	MSI2	95	86.219	ENSODEG00000011974	MSI2	90	86.219	Octodon_degus
ENSUMAG00000000505	MSI2	54	95.050	ENSONIG00000001972	msi2a	72	95.050	Oreochromis_niloticus
ENSUMAG00000000505	MSI2	95	98.964	ENSOANG00000005667	MSI2	72	91.071	Ornithorhynchus_anatinus
ENSUMAG00000000505	MSI2	95	92.075	ENSOCUG00000010440	MSI2	93	92.075	Oryctolagus_cuniculus
ENSUMAG00000000505	MSI2	100	93.782	ENSORLG00000009671	msi2a	93	91.085	Oryzias_latipes
ENSUMAG00000000505	MSI2	100	93.782	ENSORLG00020021556	msi2a	89	92.213	Oryzias_latipes_hni
ENSUMAG00000000505	MSI2	100	93.782	ENSORLG00015004592	msi2a	93	91.085	Oryzias_latipes_hsok
ENSUMAG00000000505	MSI2	95	93.782	ENSOMEG00000000146	msi2a	89	92.213	Oryzias_melastigma
ENSUMAG00000000505	MSI2	95	86.792	ENSOGAG00000005621	MSI2	95	86.792	Otolemur_garnettii
ENSUMAG00000000505	MSI2	95	86.219	ENSPPAG00000037697	MSI2	92	97.970	Pan_paniscus
ENSUMAG00000000505	MSI2	95	92.075	ENSPPRG00000001848	MSI2	92	98.469	Panthera_pardus
ENSUMAG00000000505	MSI2	95	86.219	ENSPTIG00000021678	MSI2	84	98.469	Panthera_tigris_altaica
ENSUMAG00000000505	MSI2	76	82.828	ENSPTIG00000021873	-	81	82.828	Panthera_tigris_altaica
ENSUMAG00000000505	MSI2	95	89.623	ENSPTRG00000009437	MSI2	92	97.970	Pan_troglodytes
ENSUMAG00000000505	MSI2	95	92.075	ENSPANG00000022319	MSI2	92	98.469	Papio_anubis
ENSUMAG00000000505	MSI2	95	90.984	ENSPKIG00000007038	-	85	90.984	Paramormyrops_kingsleyae
ENSUMAG00000000505	MSI2	95	98.964	ENSPSIG00000008618	MSI2	75	98.077	Pelodiscus_sinensis
ENSUMAG00000000505	MSI2	95	84.151	ENSPMGG00000005888	msi2a	89	84.470	Periophthalmus_magnuspinnatus
ENSUMAG00000000505	MSI2	54	100.000	ENSPEMG00000021793	-	100	100.000	Peromyscus_maniculatus_bairdii
ENSUMAG00000000505	MSI2	100	83.224	ENSPCIG00000006063	MSI2	94	79.016	Phascolarctos_cinereus
ENSUMAG00000000505	MSI2	53	90.909	ENSPFOG00000019337	MSI2	74	90.909	Poecilia_formosa
ENSUMAG00000000505	MSI2	54	89.247	ENSPLAG00000000436	msi2a	64	90.217	Poecilia_latipinna
ENSUMAG00000000505	MSI2	54	89.247	ENSPMEG00000013247	msi2a	66	89.247	Poecilia_mexicana
ENSUMAG00000000505	MSI2	95	93.782	ENSPREG00000000881	msi2a	88	84.848	Poecilia_reticulata
ENSUMAG00000000505	MSI2	79	87.111	ENSPPYG00000008244	-	94	87.111	Pongo_abelii
ENSUMAG00000000505	MSI2	79	59.556	ENSPCAG00000010552	MSI2	95	59.556	Procavia_capensis
ENSUMAG00000000505	MSI2	54	100.000	ENSPCOG00000019195	-	93	100.000	Propithecus_coquereli
ENSUMAG00000000505	MSI2	95	82.264	ENSPVAG00000017053	MSI2	95	83.209	Pteropus_vampyrus
ENSUMAG00000000505	MSI2	95	93.264	ENSPNYG00000018393	msi2a	89	91.803	Pundamilia_nyererei
ENSUMAG00000000505	MSI2	95	97.409	ENSPNAG00000000844	msi2b	89	87.594	Pygocentrus_nattereri
ENSUMAG00000000505	MSI2	95	96.373	ENSPNAG00000014957	msi2a	90	87.218	Pygocentrus_nattereri
ENSUMAG00000000505	MSI2	95	92.075	ENSRNOG00000025338	Msi2	95	92.075	Rattus_norvegicus
ENSUMAG00000000505	MSI2	54	100.000	ENSRROG00000034421	-	92	100.000	Rhinopithecus_roxellana
ENSUMAG00000000505	MSI2	95	90.047	ENSSBOG00000026425	MSI2	92	98.469	Saimiri_boliviensis_boliviensis
ENSUMAG00000000505	MSI2	95	84.806	ENSSHAG00000008672	MSI2	96	84.806	Sarcophilus_harrisii
ENSUMAG00000000505	MSI2	95	90.574	ENSSFOG00015021687	-	93	90.574	Scleropages_formosus
ENSUMAG00000000505	MSI2	100	93.782	ENSSMAG00000018484	msi2a	89	92.213	Scophthalmus_maximus
ENSUMAG00000000505	MSI2	95	93.782	ENSSDUG00000014507	msi2a	89	92.213	Seriola_dumerili
ENSUMAG00000000505	MSI2	95	80.364	ENSSDUG00000021968	-	86	94.059	Seriola_dumerili
ENSUMAG00000000505	MSI2	100	93.782	ENSSLDG00000017172	msi2a	93	91.473	Seriola_lalandi_dorsalis
ENSUMAG00000000505	MSI2	54	95.370	ENSSPUG00000000913	-	81	95.370	Sphenodon_punctatus
ENSUMAG00000000505	MSI2	100	93.782	ENSSPAG00000017793	msi2a	93	91.829	Stegastes_partitus
ENSUMAG00000000505	MSI2	100	100.000	ENSSSCG00000038505	MSI2	93	100.000	Sus_scrofa
ENSUMAG00000000505	MSI2	82	78.866	ENSTGUG00000008452	MSI2	94	78.866	Taeniopygia_guttata
ENSUMAG00000000505	MSI2	95	93.782	ENSTRUG00000021248	msi2a	84	84.848	Takifugu_rubripes
ENSUMAG00000000505	MSI2	75	84.896	ENSTBEG00000001241	MSI2	59	84.896	Tupaia_belangeri
ENSUMAG00000000505	MSI2	95	90.222	ENSTTRG00000002189	MSI2	95	90.222	Tursiops_truncatus
ENSUMAG00000000505	MSI2	95	100.000	ENSUAMG00000000700	MSI2	92	100.000	Ursus_americanus
ENSUMAG00000000505	MSI2	65	83.234	ENSVPAG00000006837	-	62	83.234	Vicugna_pacos
ENSUMAG00000000505	MSI2	95	100.000	ENSVVUG00000011783	MSI2	90	86.219	Vulpes_vulpes
ENSUMAG00000000505	MSI2	94	92.708	ENSXCOG00000006113	msi2a	77	86.000	Xiphophorus_couchianus
ENSUMAG00000000505	MSI2	95	93.782	ENSXMAG00000000608	msi2a	89	91.803	Xiphophorus_maculatus