EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000000855 (Gene tree)
Gene ID: 103675995
Gene Symbol: LSG1
Alias: -
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 30107 bases
Position: chrKK498707.1:171331-201437
Accession: 103675995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000000794	MMR_HSR1	PF01926.23	4.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000001050	LSG1-201	2324	-	ENSUMAP00000000794	659 (aa)	XP_008703364	UPI0004E02263

Gene Model

Click here to download ENSUMAG00000000855's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000000855's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000000855	LSG1	99	83.587	ENSG00000041802	LSG1	98	88.506	Homo_sapiens
ENSUMAG00000000855	LSG1	100	64.653	ENSAPOG00000009694	lsg1	100	64.350	Acanthochromis_polyacanthus
ENSUMAG00000000855	LSG1	100	96.970	ENSAMEG00000009343	LSG1	100	96.970	Ailuropoda_melanoleuca
ENSUMAG00000000855	LSG1	98	63.932	ENSACIG00000012406	lsg1	100	63.278	Amphilophus_citrinellus
ENSUMAG00000000855	LSG1	100	62.840	ENSAOCG00000016066	lsg1	100	63.801	Amphiprion_ocellaris
ENSUMAG00000000855	LSG1	100	63.897	ENSAPEG00000003252	lsg1	100	63.952	Amphiprion_percula
ENSUMAG00000000855	LSG1	98	63.622	ENSATEG00000011794	lsg1	100	63.348	Anabas_testudineus
ENSUMAG00000000855	LSG1	95	65.665	ENSACAG00000004222	LSG1	99	64.557	Anolis_carolinensis
ENSUMAG00000000855	LSG1	99	84.498	ENSANAG00000021153	LSG1	99	84.498	Aotus_nancymaae
ENSUMAG00000000855	LSG1	100	62.669	ENSACLG00000000520	lsg1	100	62.727	Astatotilapia_calliptera
ENSUMAG00000000855	LSG1	100	62.315	ENSAMXG00000008271	lsg1	100	62.048	Astyanax_mexicanus
ENSUMAG00000000855	LSG1	99	83.587	ENSBTAG00000008461	LSG1	99	83.587	Bos_taurus
ENSUMAG00000000855	LSG1	75	50.249	WBGene00016907	C53H9.2	95	55.224	Caenorhabditis_elegans
ENSUMAG00000000855	LSG1	99	84.043	ENSCJAG00000013962	LSG1	99	84.043	Callithrix_jacchus
ENSUMAG00000000855	LSG1	95	89.457	ENSCAFG00000013445	LSG1	100	89.457	Canis_familiaris
ENSUMAG00000000855	LSG1	100	88.369	ENSCAFG00020002216	LSG1	100	88.369	Canis_lupus_dingo
ENSUMAG00000000855	LSG1	100	83.308	ENSCHIG00000015769	LSG1	100	83.308	Capra_hircus
ENSUMAG00000000855	LSG1	99	83.891	ENSTSYG00000001447	LSG1	99	83.891	Carlito_syrichta
ENSUMAG00000000855	LSG1	95	76.752	ENSCAPG00000009856	LSG1	99	76.000	Cavia_aperea
ENSUMAG00000000855	LSG1	99	82.979	ENSCCAG00000035744	LSG1	99	82.979	Cebus_capucinus
ENSUMAG00000000855	LSG1	99	84.043	ENSCATG00000042060	LSG1	99	82.675	Cercocebus_atys
ENSUMAG00000000855	LSG1	99	84.195	ENSCSAG00000008796	LSG1	92	84.195	Chlorocebus_sabaeus
ENSUMAG00000000855	LSG1	100	69.382	ENSCPBG00000015941	LSG1	83	69.080	Chrysemys_picta_bellii
ENSUMAG00000000855	LSG1	72	63.684	ENSCING00000007079	-	92	63.684	Ciona_intestinalis
ENSUMAG00000000855	LSG1	76	55.102	ENSCSAVG00000002514	-	96	55.102	Ciona_savignyi
ENSUMAG00000000855	LSG1	99	83.739	ENSCANG00000030709	LSG1	99	83.739	Colobus_angolensis_palliatus
ENSUMAG00000000855	LSG1	99	81.487	ENSCGRG00001019846	Lsg1	99	81.487	Cricetulus_griseus_chok1gshd
ENSUMAG00000000855	LSG1	99	81.487	ENSCGRG00000014617	Lsg1	99	81.487	Cricetulus_griseus_crigri
ENSUMAG00000000855	LSG1	98	63.287	ENSCSEG00000008522	lsg1	100	62.801	Cynoglossus_semilaevis
ENSUMAG00000000855	LSG1	98	65.062	ENSCVAG00000002484	lsg1	100	64.795	Cyprinodon_variegatus
ENSUMAG00000000855	LSG1	100	65.606	ENSDARG00000015352	lsg1	100	65.606	Danio_rerio
ENSUMAG00000000855	LSG1	99	82.602	ENSDNOG00000006224	LSG1	99	82.300	Dasypus_novemcinctus
ENSUMAG00000000855	LSG1	82	58.607	FBgn0266284	Ns3	89	58.607	Drosophila_melanogaster
ENSUMAG00000000855	LSG1	88	85.333	ENSETEG00000003888	LSG1	89	85.333	Echinops_telfairi
ENSUMAG00000000855	LSG1	89	57.167	ENSEBUG00000003119	lsg1	85	57.333	Eptatretus_burgeri
ENSUMAG00000000855	LSG1	99	85.106	ENSEASG00005000678	LSG1	99	85.106	Equus_asinus_asinus
ENSUMAG00000000855	LSG1	99	85.258	ENSECAG00000017659	LSG1	99	85.258	Equus_caballus
ENSUMAG00000000855	LSG1	87	80.342	ENSEEUG00000015217	LSG1	87	80.342	Erinaceus_europaeus
ENSUMAG00000000855	LSG1	100	60.332	ENSELUG00000023973	lsg1	100	60.332	Esox_lucius
ENSUMAG00000000855	LSG1	100	90.288	ENSFCAG00000024957	LSG1	100	90.288	Felis_catus
ENSUMAG00000000855	LSG1	93	66.829	ENSFALG00000007210	LSG1	94	65.961	Ficedula_albicollis
ENSUMAG00000000855	LSG1	99	78.163	ENSFDAG00000017373	LSG1	99	78.030	Fukomys_damarensis
ENSUMAG00000000855	LSG1	97	63.256	ENSFHEG00000003680	lsg1	99	62.090	Fundulus_heteroclitus
ENSUMAG00000000855	LSG1	82	72.269	ENSGMOG00000015834	lsg1	88	71.032	Gadus_morhua
ENSUMAG00000000855	LSG1	99	64.060	ENSGALG00000007058	LSG1	87	62.874	Gallus_gallus
ENSUMAG00000000855	LSG1	97	64.486	ENSGAFG00000015831	lsg1	99	63.982	Gambusia_affinis
ENSUMAG00000000855	LSG1	98	61.280	ENSGACG00000009323	lsg1	100	60.448	Gasterosteus_aculeatus
ENSUMAG00000000855	LSG1	99	84.043	ENSGGOG00000000520	LSG1	99	84.043	Gorilla_gorilla
ENSUMAG00000000855	LSG1	100	63.158	ENSHBUG00000005659	lsg1	100	62.879	Haplochromis_burtoni
ENSUMAG00000000855	LSG1	99	75.452	ENSHGLG00000017390	LSG1	99	76.205	Heterocephalus_glaber_female
ENSUMAG00000000855	LSG1	99	75.452	ENSHGLG00100018587	LSG1	99	76.205	Heterocephalus_glaber_male
ENSUMAG00000000855	LSG1	98	62.906	ENSHCOG00000016848	lsg1	100	61.654	Hippocampus_comes
ENSUMAG00000000855	LSG1	100	63.540	ENSIPUG00000008631	lsg1	100	64.145	Ictalurus_punctatus
ENSUMAG00000000855	LSG1	81	76.846	ENSSTOG00000010234	LSG1	99	78.643	Ictidomys_tridecemlineatus
ENSUMAG00000000855	LSG1	99	80.000	ENSJJAG00000015513	Lsg1	99	79.697	Jaculus_jaculus
ENSUMAG00000000855	LSG1	98	62.597	ENSKMAG00000009681	lsg1	100	61.991	Kryptolebias_marmoratus
ENSUMAG00000000855	LSG1	98	62.384	ENSLBEG00000024261	lsg1	100	61.631	Labrus_bergylta
ENSUMAG00000000855	LSG1	100	64.962	ENSLACG00000013399	LSG1	100	64.458	Latimeria_chalumnae
ENSUMAG00000000855	LSG1	98	65.443	ENSLOCG00000004918	lsg1	100	64.962	Lepisosteus_oculatus
ENSUMAG00000000855	LSG1	99	82.219	ENSLAFG00000012919	-	99	82.219	Loxodonta_africana
ENSUMAG00000000855	LSG1	99	84.347	ENSMFAG00000039903	LSG1	99	82.979	Macaca_fascicularis
ENSUMAG00000000855	LSG1	99	84.347	ENSMMUG00000010708	LSG1	99	84.347	Macaca_mulatta
ENSUMAG00000000855	LSG1	99	84.043	ENSMNEG00000031538	LSG1	99	82.523	Macaca_nemestrina
ENSUMAG00000000855	LSG1	99	84.347	ENSMLEG00000041184	LSG1	99	84.347	Mandrillus_leucophaeus
ENSUMAG00000000855	LSG1	100	62.763	ENSMAMG00000000470	lsg1	100	62.613	Mastacembelus_armatus
ENSUMAG00000000855	LSG1	100	63.308	ENSMZEG00005017865	lsg1	100	63.030	Maylandia_zebra
ENSUMAG00000000855	LSG1	89	64.298	ENSMGAG00000007050	LSG1	99	64.636	Meleagris_gallopavo
ENSUMAG00000000855	LSG1	91	79.436	ENSMAUG00000016976	Lsg1	93	80.100	Mesocricetus_auratus
ENSUMAG00000000855	LSG1	99	82.523	ENSMICG00000049087	LSG1	99	82.523	Microcebus_murinus
ENSUMAG00000000855	LSG1	99	79.425	ENSMOCG00000022136	Lsg1	99	79.909	Microtus_ochrogaster
ENSUMAG00000000855	LSG1	82	72.093	ENSMMOG00000008884	lsg1	98	71.146	Mola_mola
ENSUMAG00000000855	LSG1	99	57.988	ENSMODG00000019828	LSG1	99	57.164	Monodelphis_domestica
ENSUMAG00000000855	LSG1	100	79.211	MGP_CAROLIEiJ_G0020648	Lsg1	100	79.211	Mus_caroli
ENSUMAG00000000855	LSG1	100	80.121	ENSMUSG00000022538	Lsg1	100	80.121	Mus_musculus
ENSUMAG00000000855	LSG1	98	80.586	MGP_PahariEiJ_G0016352	Lsg1	100	80.606	Mus_pahari
ENSUMAG00000000855	LSG1	100	79.818	MGP_SPRETEiJ_G0021544	Lsg1	100	79.818	Mus_spretus
ENSUMAG00000000855	LSG1	100	91.351	ENSMPUG00000003734	LSG1	100	91.351	Mustela_putorius_furo
ENSUMAG00000000855	LSG1	100	85.303	ENSMLUG00000012548	LSG1	100	85.303	Myotis_lucifugus
ENSUMAG00000000855	LSG1	99	80.395	ENSNGAG00000021872	Lsg1	99	79.939	Nannospalax_galili
ENSUMAG00000000855	LSG1	99	84.347	ENSNLEG00000008293	LSG1	99	84.347	Nomascus_leucogenys
ENSUMAG00000000855	LSG1	69	70.103	ENSMEUG00000009041	-	82	70.103	Notamacropus_eugenii
ENSUMAG00000000855	LSG1	100	62.985	ENSONIG00000002635	lsg1	100	63.134	Oreochromis_niloticus
ENSUMAG00000000855	LSG1	95	71.178	ENSOANG00000012742	LSG1	99	70.064	Ornithorhynchus_anatinus
ENSUMAG00000000855	LSG1	99	82.827	ENSOCUG00000004817	LSG1	99	82.827	Oryctolagus_cuniculus
ENSUMAG00000000855	LSG1	98	62.751	ENSORLG00000007695	lsg1	100	62.671	Oryzias_latipes
ENSUMAG00000000855	LSG1	98	62.539	ENSORLG00020016286	lsg1	100	62.085	Oryzias_latipes_hni
ENSUMAG00000000855	LSG1	98	62.539	ENSORLG00015012025	lsg1	100	61.912	Oryzias_latipes_hsok
ENSUMAG00000000855	LSG1	98	61.669	ENSOMEG00000022379	lsg1	100	61.212	Oryzias_melastigma
ENSUMAG00000000855	LSG1	99	84.290	ENSOGAG00000003475	LSG1	99	84.290	Otolemur_garnettii
ENSUMAG00000000855	LSG1	100	83.333	ENSOARG00000020403	LSG1	100	83.333	Ovis_aries
ENSUMAG00000000855	LSG1	99	84.043	ENSPPAG00000029271	LSG1	99	84.043	Pan_paniscus
ENSUMAG00000000855	LSG1	100	89.339	ENSPPRG00000010281	LSG1	100	89.339	Panthera_pardus
ENSUMAG00000000855	LSG1	100	90.137	ENSPTIG00000010789	LSG1	100	90.137	Panthera_tigris_altaica
ENSUMAG00000000855	LSG1	99	83.891	ENSPTRG00000015760	LSG1	99	83.891	Pan_troglodytes
ENSUMAG00000000855	LSG1	99	84.195	ENSPANG00000018249	LSG1	99	82.827	Papio_anubis
ENSUMAG00000000855	LSG1	97	63.777	ENSPKIG00000002895	lsg1	99	63.363	Paramormyrops_kingsleyae
ENSUMAG00000000855	LSG1	96	65.533	ENSPSIG00000009821	LSG1	100	64.915	Pelodiscus_sinensis
ENSUMAG00000000855	LSG1	95	63.391	ENSPMGG00000000931	lsg1	100	63.333	Periophthalmus_magnuspinnatus
ENSUMAG00000000855	LSG1	99	80.787	ENSPEMG00000012082	-	99	79.279	Peromyscus_maniculatus_bairdii
ENSUMAG00000000855	LSG1	99	58.457	ENSPMAG00000007451	lsg1	99	58.780	Petromyzon_marinus
ENSUMAG00000000855	LSG1	100	64.767	ENSPCIG00000013890	LSG1	82	64.767	Phascolarctos_cinereus
ENSUMAG00000000855	LSG1	97	65.630	ENSPFOG00000021882	lsg1	99	64.318	Poecilia_formosa
ENSUMAG00000000855	LSG1	97	64.852	ENSPLAG00000019536	lsg1	99	63.473	Poecilia_latipinna
ENSUMAG00000000855	LSG1	97	64.806	ENSPMEG00000017281	lsg1	99	63.528	Poecilia_mexicana
ENSUMAG00000000855	LSG1	97	54.809	ENSPREG00000006048	lsg1	99	53.676	Poecilia_reticulata
ENSUMAG00000000855	LSG1	92	82.566	ENSPPYG00000014425	LSG1	100	82.566	Pongo_abelii
ENSUMAG00000000855	LSG1	90	84.000	ENSPCAG00000005511	LSG1	90	84.000	Procavia_capensis
ENSUMAG00000000855	LSG1	99	83.891	ENSPCOG00000012360	LSG1	99	83.891	Propithecus_coquereli
ENSUMAG00000000855	LSG1	100	62.519	ENSPNYG00000021994	lsg1	100	62.576	Pundamilia_nyererei
ENSUMAG00000000855	LSG1	100	64.103	ENSPNAG00000015533	lsg1	100	63.897	Pygocentrus_nattereri
ENSUMAG00000000855	LSG1	100	79.638	ENSRNOG00000001727	Lsg1	100	79.789	Rattus_norvegicus
ENSUMAG00000000855	LSG1	99	82.827	ENSRBIG00000029053	LSG1	99	82.827	Rhinopithecus_bieti
ENSUMAG00000000855	LSG1	99	82.827	ENSRROG00000037702	LSG1	99	82.827	Rhinopithecus_roxellana
ENSUMAG00000000855	LSG1	65	57.485	YGL099W	LSG1	65	57.485	Saccharomyces_cerevisiae
ENSUMAG00000000855	LSG1	99	84.498	ENSSBOG00000034938	LSG1	99	84.498	Saimiri_boliviensis_boliviensis
ENSUMAG00000000855	LSG1	78	64.474	ENSSHAG00000003487	LSG1	100	63.757	Sarcophilus_harrisii
ENSUMAG00000000855	LSG1	98	63.664	ENSSFOG00015008955	lsg1	100	62.930	Scleropages_formosus
ENSUMAG00000000855	LSG1	98	64.067	ENSSDUG00000004622	lsg1	100	63.348	Seriola_dumerili
ENSUMAG00000000855	LSG1	98	63.538	ENSSLDG00000010869	lsg1	100	63.126	Seriola_lalandi_dorsalis
ENSUMAG00000000855	LSG1	81	82.456	ENSSARG00000012981	LSG1	81	82.456	Sorex_araneus
ENSUMAG00000000855	LSG1	100	67.905	ENSSPUG00000016347	LSG1	100	75.806	Sphenodon_punctatus
ENSUMAG00000000855	LSG1	100	58.069	ENSSPAG00000005508	lsg1	100	62.085	Stegastes_partitus
ENSUMAG00000000855	LSG1	100	83.005	ENSSSCG00000011827	LSG1	100	83.005	Sus_scrofa
ENSUMAG00000000855	LSG1	89	64.500	ENSTGUG00000009068	LSG1	100	64.500	Taeniopygia_guttata
ENSUMAG00000000855	LSG1	98	60.648	ENSTRUG00000017380	lsg1	100	60.241	Takifugu_rubripes
ENSUMAG00000000855	LSG1	98	63.945	ENSTNIG00000015570	lsg1	100	63.609	Tetraodon_nigroviridis
ENSUMAG00000000855	LSG1	100	76.061	ENSTTRG00000000559	LSG1	100	76.061	Tursiops_truncatus
ENSUMAG00000000855	LSG1	100	100.000	ENSUAMG00000012454	LSG1	100	100.000	Ursus_americanus
ENSUMAG00000000855	LSG1	95	80.032	ENSVPAG00000012400	LSG1	100	80.032	Vicugna_pacos
ENSUMAG00000000855	LSG1	95	88.658	ENSVVUG00000008956	LSG1	97	88.658	Vulpes_vulpes
ENSUMAG00000000855	LSG1	99	65.269	ENSXETG00000003451	lsg1	100	64.201	Xenopus_tropicalis
ENSUMAG00000000855	LSG1	97	63.957	ENSXCOG00000003239	lsg1	99	63.323	Xiphophorus_couchianus
ENSUMAG00000000855	LSG1	97	63.540	ENSXMAG00000005536	lsg1	99	63.196	Xiphophorus_maculatus