EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000001456 (Gene tree)
Gene ID: 103667503
Gene Symbol: TDRKH
Alias: TDRD2
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 6242 bases
Position: chrKK498619.1:1538477-1544718
Accession: 11713
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000001796	KH_1	PF00013.29	1.5e-33	1	2
ENSUMAP00000001796	KH_1	PF00013.29	1.5e-33	2	2
ENSUMAP00000001781	KH_1	PF00013.29	1.7e-33	1	2
ENSUMAP00000001781	KH_1	PF00013.29	1.7e-33	2	2
ENSUMAP00000001796	TUDOR	PF00567.24	1e-28	1	1
ENSUMAP00000001781	TUDOR	PF00567.24	1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000002210	TDRKH-201	1746	-	ENSUMAP00000001781	581 (aa)	-	-
ENSUMAT00000002225	TDRKH-202	1689	-	ENSUMAP00000001796	562 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000001456's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000001456's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000001456	TDRKH	100	90.053	ENSG00000182134	TDRKH	100	100.000	Homo_sapiens
ENSUMAG00000001456	TDRKH	100	96.803	ENSAMEG00000000421	TDRKH	100	96.803	Ailuropoda_melanoleuca
ENSUMAG00000001456	TDRKH	85	56.646	ENSACAG00000007457	TDRKH	95	56.646	Anolis_carolinensis
ENSUMAG00000001456	TDRKH	100	89.698	ENSANAG00000021663	TDRKH	100	89.698	Aotus_nancymaae
ENSUMAG00000001456	TDRKH	100	91.119	ENSBTAG00000021594	TDRKH	100	91.119	Bos_taurus
ENSUMAG00000001456	TDRKH	100	89.343	ENSCJAG00000007955	TDRKH	100	89.343	Callithrix_jacchus
ENSUMAG00000001456	TDRKH	100	94.671	ENSCAFG00000012856	TDRKH	100	94.671	Canis_familiaris
ENSUMAG00000001456	TDRKH	100	94.671	ENSCAFG00020009606	TDRKH	100	94.671	Canis_lupus_dingo
ENSUMAG00000001456	TDRKH	100	90.231	ENSCHIG00000025326	TDRKH	100	90.231	Capra_hircus
ENSUMAG00000001456	TDRKH	100	88.099	ENSTSYG00000010405	TDRKH	100	88.099	Carlito_syrichta
ENSUMAG00000001456	TDRKH	92	86.434	ENSCAPG00000007565	TDRKH	97	86.434	Cavia_aperea
ENSUMAG00000001456	TDRKH	100	88.455	ENSCPOG00000003556	TDRKH	100	88.455	Cavia_porcellus
ENSUMAG00000001456	TDRKH	100	89.343	ENSCCAG00000033931	TDRKH	100	89.343	Cebus_capucinus
ENSUMAG00000001456	TDRKH	100	90.053	ENSCATG00000041878	TDRKH	100	90.053	Cercocebus_atys
ENSUMAG00000001456	TDRKH	100	86.856	ENSCLAG00000001088	TDRKH	100	86.856	Chinchilla_lanigera
ENSUMAG00000001456	TDRKH	100	90.231	ENSCSAG00000001820	TDRKH	100	90.231	Chlorocebus_sabaeus
ENSUMAG00000001456	TDRKH	89	87.059	ENSCHOG00000000264	TDRKH	100	74.382	Choloepus_hoffmanni
ENSUMAG00000001456	TDRKH	94	62.821	ENSCPBG00000008824	TDRKH	89	63.370	Chrysemys_picta_bellii
ENSUMAG00000001456	TDRKH	100	89.520	ENSCANG00000037367	TDRKH	100	89.520	Colobus_angolensis_palliatus
ENSUMAG00000001456	TDRKH	96	63.469	ENSCGRG00001011699	-	99	63.469	Cricetulus_griseus_chok1gshd
ENSUMAG00000001456	TDRKH	51	60.000	ENSCGRG00001010793	-	90	60.000	Cricetulus_griseus_chok1gshd
ENSUMAG00000001456	TDRKH	99	87.971	ENSCGRG00001006583	-	99	87.971	Cricetulus_griseus_chok1gshd
ENSUMAG00000001456	TDRKH	99	87.971	ENSCGRG00000012937	-	99	87.971	Cricetulus_griseus_crigri
ENSUMAG00000001456	TDRKH	51	59.649	ENSCGRG00000012138	-	90	59.649	Cricetulus_griseus_crigri
ENSUMAG00000001456	TDRKH	96	63.284	ENSCGRG00000013230	-	99	63.284	Cricetulus_griseus_crigri
ENSUMAG00000001456	TDRKH	90	90.234	ENSDNOG00000035650	TDRKH	99	90.234	Dasypus_novemcinctus
ENSUMAG00000001456	TDRKH	100	89.343	ENSDORG00000015322	Tdrkh	100	89.343	Dipodomys_ordii
ENSUMAG00000001456	TDRKH	100	81.095	ENSETEG00000008020	TDRKH	100	81.095	Echinops_telfairi
ENSUMAG00000001456	TDRKH	93	36.280	ENSEBUG00000010481	TDRKH	88	36.096	Eptatretus_burgeri
ENSUMAG00000001456	TDRKH	100	91.474	ENSEASG00005005213	TDRKH	100	91.474	Equus_asinus_asinus
ENSUMAG00000001456	TDRKH	100	91.829	ENSECAG00000013096	TDRKH	100	91.829	Equus_caballus
ENSUMAG00000001456	TDRKH	72	96.429	ENSEEUG00000015952	TDRKH	72	96.429	Erinaceus_europaeus
ENSUMAG00000001456	TDRKH	100	93.772	ENSFCAG00000010980	TDRKH	100	93.772	Felis_catus
ENSUMAG00000001456	TDRKH	100	87.034	ENSFDAG00000015315	TDRKH	100	87.034	Fukomys_damarensis
ENSUMAG00000001456	TDRKH	97	55.818	ENSGALG00000031812	TDRKH	97	55.755	Gallus_gallus
ENSUMAG00000001456	TDRKH	98	62.021	ENSGAGG00000005447	TDRKH	98	62.544	Gopherus_agassizii
ENSUMAG00000001456	TDRKH	100	90.409	ENSGGOG00000025419	TDRKH	100	90.409	Gorilla_gorilla
ENSUMAG00000001456	TDRKH	100	86.856	ENSHGLG00000007478	TDRKH	100	86.856	Heterocephalus_glaber_female
ENSUMAG00000001456	TDRKH	100	86.856	ENSHGLG00100007927	TDRKH	100	86.856	Heterocephalus_glaber_male
ENSUMAG00000001456	TDRKH	100	91.119	ENSSTOG00000006506	TDRKH	100	91.119	Ictidomys_tridecemlineatus
ENSUMAG00000001456	TDRKH	100	87.257	ENSJJAG00000000323	Tdrkh	100	87.257	Jaculus_jaculus
ENSUMAG00000001456	TDRKH	71	55.097	ENSLACG00000017639	TDRKH	98	55.097	Latimeria_chalumnae
ENSUMAG00000001456	TDRKH	99	86.726	ENSLAFG00000006274	TDRKH	100	86.726	Loxodonta_africana
ENSUMAG00000001456	TDRKH	100	90.231	ENSMFAG00000041641	TDRKH	100	90.231	Macaca_fascicularis
ENSUMAG00000001456	TDRKH	98	90.054	ENSMMUG00000009096	TDRKH	98	91.700	Macaca_mulatta
ENSUMAG00000001456	TDRKH	100	90.231	ENSMNEG00000021524	TDRKH	100	90.231	Macaca_nemestrina
ENSUMAG00000001456	TDRKH	100	90.231	ENSMLEG00000033882	TDRKH	100	90.231	Mandrillus_leucophaeus
ENSUMAG00000001456	TDRKH	99	86.631	ENSMAUG00000019159	Tdrkh	100	86.631	Mesocricetus_auratus
ENSUMAG00000001456	TDRKH	100	70.870	ENSMICG00000042330	-	100	70.870	Microcebus_murinus
ENSUMAG00000001456	TDRKH	100	90.409	ENSMICG00000010682	-	100	90.409	Microcebus_murinus
ENSUMAG00000001456	TDRKH	99	63.148	ENSMOCG00000014074	-	99	63.148	Microtus_ochrogaster
ENSUMAG00000001456	TDRKH	98	81.227	ENSMOCG00000002113	-	99	81.227	Microtus_ochrogaster
ENSUMAG00000001456	TDRKH	100	80.736	ENSMODG00000018906	TDRKH	96	80.736	Monodelphis_domestica
ENSUMAG00000001456	TDRKH	99	89.858	MGP_CAROLIEiJ_G0025310	Tdrkh	100	89.858	Mus_caroli
ENSUMAG00000001456	TDRKH	99	90.036	ENSMUSG00000041912	Tdrkh	100	90.036	Mus_musculus
ENSUMAG00000001456	TDRKH	99	89.502	MGP_PahariEiJ_G0026753	Tdrkh	100	89.502	Mus_pahari
ENSUMAG00000001456	TDRKH	99	89.858	MGP_SPRETEiJ_G0026252	Tdrkh	100	89.858	Mus_spretus
ENSUMAG00000001456	TDRKH	96	94.424	ENSMPUG00000003558	TDRKH	100	93.772	Mustela_putorius_furo
ENSUMAG00000001456	TDRKH	100	90.053	ENSMLUG00000002213	TDRKH	100	90.053	Myotis_lucifugus
ENSUMAG00000001456	TDRKH	99	89.680	ENSNGAG00000017825	Tdrkh	100	89.680	Nannospalax_galili
ENSUMAG00000001456	TDRKH	100	89.876	ENSNLEG00000010284	TDRKH	100	89.876	Nomascus_leucogenys
ENSUMAG00000001456	TDRKH	89	93.506	ENSMEUG00000006144	TDRKH	89	93.506	Notamacropus_eugenii
ENSUMAG00000001456	TDRKH	81	88.889	ENSOPRG00000016049	TDRKH	81	88.889	Ochotona_princeps
ENSUMAG00000001456	TDRKH	100	87.034	ENSODEG00000009532	-	100	87.034	Octodon_degus
ENSUMAG00000001456	TDRKH	100	85.258	ENSODEG00000001075	-	100	85.258	Octodon_degus
ENSUMAG00000001456	TDRKH	100	77.046	ENSOCUG00000001387	TDRKH	100	77.046	Oryctolagus_cuniculus
ENSUMAG00000001456	TDRKH	99	73.192	ENSOGAG00000032601	-	99	73.192	Otolemur_garnettii
ENSUMAG00000001456	TDRKH	99	79.478	ENSOGAG00000001839	-	99	79.478	Otolemur_garnettii
ENSUMAG00000001456	TDRKH	51	72.297	ENSOGAG00000030085	-	97	70.608	Otolemur_garnettii
ENSUMAG00000001456	TDRKH	100	90.409	ENSOARG00000021052	TDRKH	100	90.409	Ovis_aries
ENSUMAG00000001456	TDRKH	100	90.409	ENSPPAG00000028994	TDRKH	100	90.409	Pan_paniscus
ENSUMAG00000001456	TDRKH	100	94.484	ENSPPRG00000001585	TDRKH	100	94.484	Panthera_pardus
ENSUMAG00000001456	TDRKH	100	94.484	ENSPTIG00000019916	TDRKH	100	94.484	Panthera_tigris_altaica
ENSUMAG00000001456	TDRKH	100	90.409	ENSPTRG00000001297	TDRKH	100	90.409	Pan_troglodytes
ENSUMAG00000001456	TDRKH	100	90.231	ENSPANG00000001986	TDRKH	100	90.231	Papio_anubis
ENSUMAG00000001456	TDRKH	93	61.959	ENSPSIG00000008541	TDRKH	99	61.959	Pelodiscus_sinensis
ENSUMAG00000001456	TDRKH	99	90.214	ENSPEMG00000011171	Tdrkh	100	90.214	Peromyscus_maniculatus_bairdii
ENSUMAG00000001456	TDRKH	100	81.261	ENSPCIG00000021201	TDRKH	99	81.261	Phascolarctos_cinereus
ENSUMAG00000001456	TDRKH	100	90.409	ENSPPYG00000000855	TDRKH	100	90.409	Pongo_abelii
ENSUMAG00000001456	TDRKH	100	88.632	ENSPCOG00000027505	TDRKH	100	88.632	Propithecus_coquereli
ENSUMAG00000001456	TDRKH	100	88.455	ENSPVAG00000005234	TDRKH	100	88.455	Pteropus_vampyrus
ENSUMAG00000001456	TDRKH	99	90.747	ENSRNOG00000020860	Tdrkh	100	90.747	Rattus_norvegicus
ENSUMAG00000001456	TDRKH	100	89.876	ENSRBIG00000044860	TDRKH	100	89.876	Rhinopithecus_bieti
ENSUMAG00000001456	TDRKH	100	89.876	ENSRROG00000036923	TDRKH	100	89.876	Rhinopithecus_roxellana
ENSUMAG00000001456	TDRKH	100	71.758	ENSSBOG00000034454	TDRKH	93	80.000	Saimiri_boliviensis_boliviensis
ENSUMAG00000001456	TDRKH	100	82.137	ENSSHAG00000015859	TDRKH	88	82.137	Sarcophilus_harrisii
ENSUMAG00000001456	TDRKH	99	78.648	ENSSARG00000008525	TDRKH	100	78.648	Sorex_araneus
ENSUMAG00000001456	TDRKH	90	62.715	ENSSPUG00000002369	TDRKH	95	63.289	Sphenodon_punctatus
ENSUMAG00000001456	TDRKH	99	89.464	ENSSSCG00000027770	TDRKH	100	89.464	Sus_scrofa
ENSUMAG00000001456	TDRKH	100	88.988	ENSTBEG00000011201	TDRKH	100	88.988	Tupaia_belangeri
ENSUMAG00000001456	TDRKH	100	83.304	ENSTTRG00000003149	TDRKH	100	83.304	Tursiops_truncatus
ENSUMAG00000001456	TDRKH	100	99.484	ENSUAMG00000019589	TDRKH	100	99.484	Ursus_americanus
ENSUMAG00000001456	TDRKH	100	91.652	ENSVPAG00000000666	TDRKH	100	91.652	Vicugna_pacos
ENSUMAG00000001456	TDRKH	100	95.018	ENSVVUG00000013241	TDRKH	100	95.018	Vulpes_vulpes
ENSUMAG00000001456	TDRKH	87	40.900	ENSXETG00000019909	tdrkh	87	40.705	Xenopus_tropicalis