EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000001467 (Gene tree)
Gene ID: 103657246
Gene Symbol: SNRNP70
Alias: RNPU1Z|RPU1|SNRP70|Snp1|U1-70K
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 15005 bases
Position: chrKK498533.1:4075843-4090847
Accession: 11150
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000001552	RRM_1	PF00076.22	6.8e-18	1	1
ENSUMAP00000001557	RRM_1	PF00076.22	1.5e-13	1	1
ENSUMAP00000001557	U1snRNP70_N	PF12220.8	9e-29	1	1
ENSUMAP00000001552	U1snRNP70_N	PF12220.8	1.2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000001944	SNRNP70-201	1501	-	ENSUMAP00000001552	432 (aa)	-	-
ENSUMAT00000001949	SNRNP70-202	511	-	ENSUMAP00000001557	166 (aa)	-	UPI000000411A

Gene Model

Click here to download ENSUMAG00000001467's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000001467's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000001467	SNRNP70	100	100.000	ENSG00000104852	SNRNP70	100	100.000	Homo_sapiens
ENSUMAG00000001467	SNRNP70	86	88.028	ENSAPOG00000009322	snrnp70	89	88.028	Acanthochromis_polyacanthus
ENSUMAG00000001467	SNRNP70	99	97.561	ENSAMEG00000014468	SNRNP70	59	95.349	Ailuropoda_melanoleuca
ENSUMAG00000001467	SNRNP70	99	89.634	ENSAOCG00000011672	snrnp70	50	83.482	Amphiprion_ocellaris
ENSUMAG00000001467	SNRNP70	99	93.902	ENSACAG00000013276	SNRNP70	51	97.297	Anolis_carolinensis
ENSUMAG00000001467	SNRNP70	100	100.000	ENSANAG00000036787	SNRNP70	100	100.000	Aotus_nancymaae
ENSUMAG00000001467	SNRNP70	100	100.000	ENSBTAG00000048800	-	100	100.000	Bos_taurus
ENSUMAG00000001467	SNRNP70	99	50.303	WBGene00004390	rnp-7	56	53.723	Caenorhabditis_elegans
ENSUMAG00000001467	SNRNP70	100	100.000	ENSCJAG00000000193	SNRNP70	100	100.000	Callithrix_jacchus
ENSUMAG00000001467	SNRNP70	100	100.000	ENSCAFG00000003711	SNRNP70	100	100.000	Canis_familiaris
ENSUMAG00000001467	SNRNP70	100	95.833	ENSCAFG00020025470	SNRNP70	100	95.833	Canis_lupus_dingo
ENSUMAG00000001467	SNRNP70	100	100.000	ENSCHIG00000018534	-	100	100.000	Capra_hircus
ENSUMAG00000001467	SNRNP70	63	88.571	ENSTSYG00000032350	-	85	88.571	Carlito_syrichta
ENSUMAG00000001467	SNRNP70	99	97.561	ENSCPOG00000019589	SNRNP70	58	98.833	Cavia_porcellus
ENSUMAG00000001467	SNRNP70	69	96.522	ENSCCAG00000036551	SNRNP70	53	98.558	Cebus_capucinus
ENSUMAG00000001467	SNRNP70	99	97.561	ENSCATG00000016149	SNRNP70	59	98.833	Cercocebus_atys
ENSUMAG00000001467	SNRNP70	99	97.561	ENSCLAG00000007991	SNRNP70	59	98.833	Chinchilla_lanigera
ENSUMAG00000001467	SNRNP70	99	97.561	ENSCSAG00000002759	SNRNP70	58	95.331	Chlorocebus_sabaeus
ENSUMAG00000001467	SNRNP70	99	96.341	ENSCPBG00000014841	SNRNP70	51	99.099	Chrysemys_picta_bellii
ENSUMAG00000001467	SNRNP70	96	66.875	ENSCSAVG00000010109	-	50	70.681	Ciona_savignyi
ENSUMAG00000001467	SNRNP70	99	97.561	ENSCANG00000036607	SNRNP70	99	99.187	Colobus_angolensis_palliatus
ENSUMAG00000001467	SNRNP70	99	97.561	ENSCGRG00001020676	Snrnp70	58	98.833	Cricetulus_griseus_chok1gshd
ENSUMAG00000001467	SNRNP70	99	97.561	ENSCGRG00000018048	Snrnp70	58	98.833	Cricetulus_griseus_crigri
ENSUMAG00000001467	SNRNP70	99	88.415	ENSCSEG00000011978	snrnp70	99	91.480	Cynoglossus_semilaevis
ENSUMAG00000001467	SNRNP70	96	89.937	ENSCVAG00000003912	snrnp70	99	89.937	Cyprinodon_variegatus
ENSUMAG00000001467	SNRNP70	99	86.585	ENSDARG00000077126	snrnp70	99	88.820	Danio_rerio
ENSUMAG00000001467	SNRNP70	100	100.000	ENSDNOG00000035849	-	100	100.000	Dasypus_novemcinctus
ENSUMAG00000001467	SNRNP70	99	97.561	ENSDORG00000010228	Snrnp70	58	98.833	Dipodomys_ordii
ENSUMAG00000001467	SNRNP70	99	60.366	FBgn0016978	snRNP-U1-70K	58	59.696	Drosophila_melanogaster
ENSUMAG00000001467	SNRNP70	99	97.561	ENSEASG00005004917	SNRNP70	59	98.833	Equus_asinus_asinus
ENSUMAG00000001467	SNRNP70	100	100.000	ENSECAG00000013936	-	100	100.000	Equus_caballus
ENSUMAG00000001467	SNRNP70	99	72.561	ENSEEUG00000005666	SNRNP70	59	78.210	Erinaceus_europaeus
ENSUMAG00000001467	SNRNP70	99	97.561	ENSFCAG00000042603	SNRNP70	61	98.833	Felis_catus
ENSUMAG00000001467	SNRNP70	99	97.561	ENSFDAG00000013830	SNRNP70	95	97.531	Fukomys_damarensis
ENSUMAG00000001467	SNRNP70	99	87.805	ENSGMOG00000011492	snrnp70	97	91.403	Gadus_morhua
ENSUMAG00000001467	SNRNP70	99	88.415	ENSGACG00000000448	snrnp70	70	91.928	Gasterosteus_aculeatus
ENSUMAG00000001467	SNRNP70	96	80.000	ENSGAGG00000012628	SNRNP70	99	80.000	Gopherus_agassizii
ENSUMAG00000001467	SNRNP70	100	100.000	ENSGGOG00000008245	SNRNP70	100	100.000	Gorilla_gorilla
ENSUMAG00000001467	SNRNP70	100	100.000	ENSHGLG00100001651	-	100	100.000	Heterocephalus_glaber_male
ENSUMAG00000001467	SNRNP70	100	100.000	ENSSTOG00000013988	-	100	100.000	Ictidomys_tridecemlineatus
ENSUMAG00000001467	SNRNP70	99	97.561	ENSJJAG00000002614	Snrnp70	58	98.833	Jaculus_jaculus
ENSUMAG00000001467	SNRNP70	99	97.561	ENSLAFG00000028536	SNRNP70	100	100.000	Loxodonta_africana
ENSUMAG00000001467	SNRNP70	99	97.561	ENSMFAG00000039824	SNRNP70	59	98.833	Macaca_fascicularis
ENSUMAG00000001467	SNRNP70	100	100.000	ENSMMUG00000004928	SNRNP70	100	100.000	Macaca_mulatta
ENSUMAG00000001467	SNRNP70	99	97.561	ENSMNEG00000038057	SNRNP70	60	98.833	Macaca_nemestrina
ENSUMAG00000001467	SNRNP70	99	97.561	ENSMLEG00000030967	SNRNP70	59	98.833	Mandrillus_leucophaeus
ENSUMAG00000001467	SNRNP70	99	97.561	ENSMAUG00000020970	Snrnp70	58	98.833	Mesocricetus_auratus
ENSUMAG00000001467	SNRNP70	100	100.000	ENSMICG00000038437	SNRNP70	100	100.000	Microcebus_murinus
ENSUMAG00000001467	SNRNP70	99	97.561	ENSMOCG00000012825	Snrnp70	57	98.833	Microtus_ochrogaster
ENSUMAG00000001467	SNRNP70	99	97.561	MGP_CAROLIEiJ_G0029714	Snrnp70	100	100.000	Mus_caroli
ENSUMAG00000001467	SNRNP70	99	97.561	ENSMUSG00000063511	Snrnp70	100	100.000	Mus_musculus
ENSUMAG00000001467	SNRNP70	99	97.561	MGP_PahariEiJ_G0012939	Snrnp70	100	100.000	Mus_pahari
ENSUMAG00000001467	SNRNP70	99	97.561	MGP_SPRETEiJ_G0030812	Snrnp70	100	100.000	Mus_spretus
ENSUMAG00000001467	SNRNP70	99	97.561	ENSMPUG00000003258	SNRNP70	59	98.833	Mustela_putorius_furo
ENSUMAG00000001467	SNRNP70	99	97.561	ENSMLUG00000011766	SNRNP70	59	98.833	Myotis_lucifugus
ENSUMAG00000001467	SNRNP70	99	97.561	ENSNGAG00000021191	Snrnp70	95	97.531	Nannospalax_galili
ENSUMAG00000001467	SNRNP70	99	89.024	ENSNBRG00000003126	snrnp70	96	92.377	Neolamprologus_brichardi
ENSUMAG00000001467	SNRNP70	95	97.468	ENSNLEG00000004899	SNRNP70	99	98.387	Nomascus_leucogenys
ENSUMAG00000001467	SNRNP70	99	97.561	ENSODEG00000017499	SNRNP70	56	98.833	Octodon_degus
ENSUMAG00000001467	SNRNP70	99	88.415	ENSONIG00000007822	snrnp70	52	91.928	Oreochromis_niloticus
ENSUMAG00000001467	SNRNP70	99	96.951	ENSOANG00000005213	SNRNP70	97	99.550	Ornithorhynchus_anatinus
ENSUMAG00000001467	SNRNP70	99	97.561	ENSOCUG00000015081	SNRNP70	70	98.833	Oryctolagus_cuniculus
ENSUMAG00000001467	SNRNP70	99	96.970	ENSOGAG00000029310	SNRNP70	59	98.450	Otolemur_garnettii
ENSUMAG00000001467	SNRNP70	99	97.561	ENSOARG00000012608	SNRNP70	83	79.016	Ovis_aries
ENSUMAG00000001467	SNRNP70	100	100.000	ENSPPAG00000035067	SNRNP70	100	100.000	Pan_paniscus
ENSUMAG00000001467	SNRNP70	99	97.561	ENSPPRG00000005579	SNRNP70	59	98.833	Panthera_pardus
ENSUMAG00000001467	SNRNP70	100	100.000	ENSPTRG00000011277	SNRNP70	100	100.000	Pan_troglodytes
ENSUMAG00000001467	SNRNP70	99	97.561	ENSPANG00000004068	SNRNP70	59	98.833	Papio_anubis
ENSUMAG00000001467	SNRNP70	96	80.503	ENSPKIG00000019992	snrnp70	86	79.012	Paramormyrops_kingsleyae
ENSUMAG00000001467	SNRNP70	98	96.296	ENSPSIG00000015251	SNRNP70	90	85.217	Pelodiscus_sinensis
ENSUMAG00000001467	SNRNP70	96	90.566	ENSPMGG00000010153	snrnp70	77	90.062	Periophthalmus_magnuspinnatus
ENSUMAG00000001467	SNRNP70	99	97.561	ENSPEMG00000019011	Snrnp70	57	98.833	Peromyscus_maniculatus_bairdii
ENSUMAG00000001467	SNRNP70	99	79.878	ENSPMAG00000008502	snrnp70	97	83.422	Petromyzon_marinus
ENSUMAG00000001467	SNRNP70	99	97.561	ENSPCIG00000007296	SNRNP70	58	94.942	Phascolarctos_cinereus
ENSUMAG00000001467	SNRNP70	99	97.561	ENSPPYG00000010234	SNRNP70	59	98.054	Pongo_abelii
ENSUMAG00000001467	SNRNP70	99	85.976	ENSPCOG00000023103	SNRNP70	82	91.739	Propithecus_coquereli
ENSUMAG00000001467	SNRNP70	99	89.024	ENSPVAG00000009578	SNRNP70	59	93.385	Pteropus_vampyrus
ENSUMAG00000001467	SNRNP70	99	97.561	ENSRBIG00000042387	SNRNP70	94	98.819	Rhinopithecus_bieti
ENSUMAG00000001467	SNRNP70	99	97.561	ENSRROG00000033636	SNRNP70	94	98.819	Rhinopithecus_roxellana
ENSUMAG00000001467	SNRNP70	100	100.000	ENSSBOG00000020026	SNRNP70	100	100.000	Saimiri_boliviensis_boliviensis
ENSUMAG00000001467	SNRNP70	99	97.561	ENSSHAG00000002194	SNRNP70	58	94.942	Sarcophilus_harrisii
ENSUMAG00000001467	SNRNP70	100	94.578	ENSSPUG00000016621	SNRNP70	52	98.649	Sphenodon_punctatus
ENSUMAG00000001467	SNRNP70	100	100.000	ENSSSCG00000023792	-	100	100.000	Sus_scrofa
ENSUMAG00000001467	SNRNP70	66	90.000	ENSTNIG00000014186	-	99	90.000	Tetraodon_nigroviridis
ENSUMAG00000001467	SNRNP70	99	97.561	ENSTTRG00000017099	SNRNP70	59	98.833	Tursiops_truncatus
ENSUMAG00000001467	SNRNP70	99	97.561	ENSUAMG00000016147	SNRNP70	59	98.833	Ursus_americanus
ENSUMAG00000001467	SNRNP70	79	99.237	ENSVPAG00000005959	-	100	80.995	Vicugna_pacos
ENSUMAG00000001467	SNRNP70	100	100.000	ENSVVUG00000022976	SNRNP70	100	100.000	Vulpes_vulpes
ENSUMAG00000001467	SNRNP70	99	93.293	ENSXETG00000022919	snrnp70	57	95.595	Xenopus_tropicalis