EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000002123 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: COD|SNRPB1|Sm-B/B'|SmB/SmB'|snRNP-B
Full Name: -
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 5760 bases
Position: chrKK498684.1:4257395-4263154
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000002369	LSM	PF01423.22	7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000002935	-	654	-	ENSUMAP00000002369	217 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000002123's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000002123's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000002123	-	64	94.245	ENSUMAG00000025589	SNRPN	57	95.620

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000002123	-	64	97.842	ENSG00000125835	SNRPB	69	97.917	Homo_sapiens
ENSUMAG00000002123	-	63	94.891	ENSAPOG00000019606	snrpb	64	76.190	Acanthochromis_polyacanthus
ENSUMAG00000002123	-	63	99.270	ENSAMEG00000011353	SNRPB	56	99.270	Ailuropoda_melanoleuca
ENSUMAG00000002123	-	62	95.556	ENSACIG00000014480	snrpb	83	76.471	Amphilophus_citrinellus
ENSUMAG00000002123	-	63	94.891	ENSAOCG00000006876	snrpb	79	76.190	Amphiprion_ocellaris
ENSUMAG00000002123	-	63	95.588	ENSAPEG00000021585	snrpb	81	76.190	Amphiprion_percula
ENSUMAG00000002123	-	63	94.891	ENSATEG00000009836	snrpb	79	76.190	Anabas_testudineus
ENSUMAG00000002123	-	61	96.241	ENSACAG00000002053	SNRPB	57	96.241	Anolis_carolinensis
ENSUMAG00000002123	-	63	91.971	ENSANAG00000036271	-	75	72.727	Aotus_nancymaae
ENSUMAG00000002123	-	64	97.842	ENSANAG00000024443	-	59	99.270	Aotus_nancymaae
ENSUMAG00000002123	-	63	94.891	ENSACLG00000014707	snrpb	79	76.190	Astatotilapia_calliptera
ENSUMAG00000002123	-	63	94.161	ENSAMXG00000029434	snrpb	90	55.760	Astyanax_mexicanus
ENSUMAG00000002123	-	63	99.270	ENSBTAG00000001038	SNRPB	59	99.270	Bos_taurus
ENSUMAG00000002123	-	89	76.190	ENSCJAG00000023097	-	58	93.525	Callithrix_jacchus
ENSUMAG00000002123	-	64	97.842	ENSCJAG00000020971	-	59	99.270	Callithrix_jacchus
ENSUMAG00000002123	-	64	97.842	ENSCAFG00000006693	-	59	99.270	Canis_familiaris
ENSUMAG00000002123	-	64	97.842	ENSCAFG00020016981	-	57	99.270	Canis_lupus_dingo
ENSUMAG00000002123	-	64	97.842	ENSCHIG00000025449	-	59	99.270	Capra_hircus
ENSUMAG00000002123	-	64	97.842	ENSTSYG00000014498	-	59	99.270	Carlito_syrichta
ENSUMAG00000002123	-	64	78.986	ENSTSYG00000032303	-	50	79.562	Carlito_syrichta
ENSUMAG00000002123	-	63	99.270	ENSCAPG00000012669	SNRPB	60	99.270	Cavia_aperea
ENSUMAG00000002123	-	64	97.842	ENSCPOG00000039408	SNRPB	59	99.270	Cavia_porcellus
ENSUMAG00000002123	-	64	97.842	ENSCCAG00000026002	SNRPB	59	99.270	Cebus_capucinus
ENSUMAG00000002123	-	57	87.097	ENSCCAG00000035140	-	84	83.333	Cebus_capucinus
ENSUMAG00000002123	-	63	99.270	ENSCATG00000030230	SNRPB	59	99.270	Cercocebus_atys
ENSUMAG00000002123	-	64	97.842	ENSCLAG00000012442	SNRPB	58	99.270	Chinchilla_lanigera
ENSUMAG00000002123	-	64	97.842	ENSCSAG00000010840	SNRPB	59	99.270	Chlorocebus_sabaeus
ENSUMAG00000002123	-	63	95.620	ENSCPBG00000026801	SNRPB	60	95.620	Chrysemys_picta_bellii
ENSUMAG00000002123	-	64	97.842	ENSCANG00000019461	SNRPB	59	99.270	Colobus_angolensis_palliatus
ENSUMAG00000002123	-	64	98.551	ENSCGRG00001023046	Snrpb	59	99.270	Cricetulus_griseus_chok1gshd
ENSUMAG00000002123	-	64	98.551	ENSCGRG00000010423	Snrpb	59	100.000	Cricetulus_griseus_crigri
ENSUMAG00000002123	-	65	93.571	ENSCSEG00000020328	snrpb	90	78.037	Cynoglossus_semilaevis
ENSUMAG00000002123	-	64	91.367	ENSDNOG00000007896	-	51	99.194	Dasypus_novemcinctus
ENSUMAG00000002123	-	64	97.842	ENSDNOG00000015545	-	57	99.270	Dasypus_novemcinctus
ENSUMAG00000002123	-	62	100.000	ENSDORG00000029558	Snrpb	59	100.000	Dipodomys_ordii
ENSUMAG00000002123	-	63	70.588	FBgn0262601	SmB	67	70.588	Drosophila_melanogaster
ENSUMAG00000002123	-	63	89.051	ENSEBUG00000007467	SNRPB	79	71.053	Eptatretus_burgeri
ENSUMAG00000002123	-	64	97.122	ENSEASG00005012991	SNRPB	59	98.540	Equus_asinus_asinus
ENSUMAG00000002123	-	64	97.842	ENSECAG00000011944	SNRPB	59	99.270	Equus_caballus
ENSUMAG00000002123	-	64	97.842	ENSFCAG00000034090	-	59	99.270	Felis_catus
ENSUMAG00000002123	-	61	96.241	ENSFALG00000004866	SNRPB	57	96.241	Ficedula_albicollis
ENSUMAG00000002123	-	63	99.270	ENSFDAG00000009937	SNRPB	59	99.270	Fukomys_damarensis
ENSUMAG00000002123	-	63	95.620	ENSGALG00000035421	SNRPN	57	95.620	Gallus_gallus
ENSUMAG00000002123	-	63	94.161	ENSGAFG00000019558	snrpb	60	94.161	Gambusia_affinis
ENSUMAG00000002123	-	64	94.245	ENSGAGG00000001308	SNRPB	57	95.620	Gopherus_agassizii
ENSUMAG00000002123	-	64	97.842	ENSGGOG00000016138	SNRPB	59	99.270	Gorilla_gorilla
ENSUMAG00000002123	-	63	94.891	ENSHBUG00000008369	snrpb	79	76.190	Haplochromis_burtoni
ENSUMAG00000002123	-	64	97.842	ENSHGLG00000016241	-	59	99.270	Heterocephalus_glaber_female
ENSUMAG00000002123	-	67	86.986	ENSHGLG00000016505	-	75	83.333	Heterocephalus_glaber_female
ENSUMAG00000002123	-	64	97.842	ENSHGLG00100012877	-	59	99.270	Heterocephalus_glaber_male
ENSUMAG00000002123	-	67	86.986	ENSHGLG00100004178	-	75	83.333	Heterocephalus_glaber_male
ENSUMAG00000002123	-	63	94.891	ENSHCOG00000014888	snrpb	90	78.037	Hippocampus_comes
ENSUMAG00000002123	-	65	95.714	ENSSTOG00000033664	-	57	97.810	Ictidomys_tridecemlineatus
ENSUMAG00000002123	-	76	93.293	ENSSTOG00000027821	-	75	92.727	Ictidomys_tridecemlineatus
ENSUMAG00000002123	-	63	99.270	ENSJJAG00000024170	Snrpb	59	99.270	Jaculus_jaculus
ENSUMAG00000002123	-	63	95.620	ENSKMAG00000014494	snrpb	77	76.190	Kryptolebias_marmoratus
ENSUMAG00000002123	-	63	95.588	ENSLBEG00000005678	snrpb	90	78.037	Labrus_bergylta
ENSUMAG00000002123	-	63	93.431	ENSLAFG00000017588	SNRPB	58	93.431	Loxodonta_africana
ENSUMAG00000002123	-	64	99.281	ENSMFAG00000038756	SNRPB	59	99.281	Macaca_fascicularis
ENSUMAG00000002123	-	64	99.281	ENSMMUG00000010050	SNRPB	59	99.270	Macaca_mulatta
ENSUMAG00000002123	-	64	99.281	ENSMNEG00000027954	SNRPB	59	99.281	Macaca_nemestrina
ENSUMAG00000002123	-	64	97.842	ENSMLEG00000022346	SNRPB	59	99.270	Mandrillus_leucophaeus
ENSUMAG00000002123	-	63	94.891	ENSMAMG00000009294	snrpb	77	76.190	Mastacembelus_armatus
ENSUMAG00000002123	-	63	94.891	ENSMZEG00005011856	snrpb	79	76.190	Maylandia_zebra
ENSUMAG00000002123	-	64	97.842	ENSMICG00000016519	SNRPB	59	99.270	Microcebus_murinus
ENSUMAG00000002123	-	63	88.321	ENSMICG00000015983	-	64	87.050	Microcebus_murinus
ENSUMAG00000002123	-	63	98.540	ENSMOCG00000002892	-	59	98.540	Microtus_ochrogaster
ENSUMAG00000002123	-	62	81.481	ENSMOCG00000021362	-	72	62.428	Microtus_ochrogaster
ENSUMAG00000002123	-	64	93.525	ENSMMOG00000013226	snrpb	92	78.037	Mola_mola
ENSUMAG00000002123	-	63	94.161	ENSMALG00000020839	snrpb	64	75.661	Monopterus_albus
ENSUMAG00000002123	-	64	97.842	MGP_CAROLIEiJ_G0024293	Snrpb	69	97.917	Mus_caroli
ENSUMAG00000002123	-	64	97.842	ENSMUSG00000027404	Snrpb	69	97.917	Mus_musculus
ENSUMAG00000002123	-	64	97.842	MGP_PahariEiJ_G0025738	Snrpb	69	97.917	Mus_pahari
ENSUMAG00000002123	-	64	97.842	MGP_SPRETEiJ_G0025213	Snrpb	77	87.273	Mus_spretus
ENSUMAG00000002123	-	64	97.842	ENSMPUG00000009283	SNRPB	59	99.270	Mustela_putorius_furo
ENSUMAG00000002123	-	63	95.620	ENSMLUG00000016951	SNRPB	56	95.620	Myotis_lucifugus
ENSUMAG00000002123	-	64	97.842	ENSNGAG00000012051	Snrpb	59	99.270	Nannospalax_galili
ENSUMAG00000002123	-	65	92.199	ENSNBRG00000006353	snrpb	73	75.393	Neolamprologus_brichardi
ENSUMAG00000002123	-	63	99.270	ENSNLEG00000029067	SNRPB	58	99.270	Nomascus_leucogenys
ENSUMAG00000002123	-	63	97.810	ENSMEUG00000015625	SNRPB	76	81.503	Notamacropus_eugenii
ENSUMAG00000002123	-	64	89.928	ENSODEG00000016060	-	57	94.161	Octodon_degus
ENSUMAG00000002123	-	64	97.842	ENSODEG00000004305	-	59	99.270	Octodon_degus
ENSUMAG00000002123	-	63	94.891	ENSONIG00000000248	snrpb	79	76.190	Oreochromis_niloticus
ENSUMAG00000002123	-	90	75.829	ENSOCUG00000021456	-	57	94.891	Oryctolagus_cuniculus
ENSUMAG00000002123	-	63	96.350	ENSOCUG00000028215	-	57	96.350	Oryctolagus_cuniculus
ENSUMAG00000002123	-	63	99.270	ENSOCUG00000014042	-	57	99.270	Oryctolagus_cuniculus
ENSUMAG00000002123	-	64	93.525	ENSOCUG00000022423	-	71	93.525	Oryctolagus_cuniculus
ENSUMAG00000002123	-	90	56.338	ENSOCUG00000026813	-	90	53.110	Oryctolagus_cuniculus
ENSUMAG00000002123	-	63	94.891	ENSORLG00000021862	snrpb	79	76.190	Oryzias_latipes
ENSUMAG00000002123	-	64	97.842	ENSOGAG00000016149	SNRPB	57	99.270	Otolemur_garnettii
ENSUMAG00000002123	-	64	97.842	ENSOARG00000006740	SNRPB	59	99.270	Ovis_aries
ENSUMAG00000002123	-	64	97.842	ENSPPAG00000036314	SNRPB	59	99.270	Pan_paniscus
ENSUMAG00000002123	-	64	97.842	ENSPPRG00000003233	-	59	99.270	Panthera_pardus
ENSUMAG00000002123	-	63	99.270	ENSPTIG00000007468	SNRPB	59	99.270	Panthera_tigris_altaica
ENSUMAG00000002123	-	64	99.275	ENSPTRG00000013176	SNRPB	59	99.270	Pan_troglodytes
ENSUMAG00000002123	-	64	97.842	ENSPANG00000020362	SNRPB	57	99.270	Papio_anubis
ENSUMAG00000002123	-	63	94.891	ENSPKIG00000002865	snrpb	58	94.891	Paramormyrops_kingsleyae
ENSUMAG00000002123	-	64	94.245	ENSPSIG00000014125	SNRPB	56	95.620	Pelodiscus_sinensis
ENSUMAG00000002123	-	63	93.382	ENSPMGG00000016349	snrpb	58	93.382	Periophthalmus_magnuspinnatus
ENSUMAG00000002123	-	64	97.842	ENSPEMG00000007948	Snrpb	59	99.270	Peromyscus_maniculatus_bairdii
ENSUMAG00000002123	-	64	96.403	ENSPCIG00000004694	SNRPB	71	81.503	Phascolarctos_cinereus
ENSUMAG00000002123	-	63	94.891	ENSPFOG00000011802	snrpb	58	94.891	Poecilia_formosa
ENSUMAG00000002123	-	68	89.333	ENSPLAG00000014130	snrpb	65	89.933	Poecilia_latipinna
ENSUMAG00000002123	-	62	95.556	ENSPREG00000015515	snrpb	62	95.556	Poecilia_reticulata
ENSUMAG00000002123	-	64	97.842	ENSPPYG00000010841	SNRPB	59	99.270	Pongo_abelii
ENSUMAG00000002123	-	64	97.842	ENSPCOG00000013686	SNRPB	59	99.270	Propithecus_coquereli
ENSUMAG00000002123	-	63	94.891	ENSPNYG00000014788	snrpb	79	76.190	Pundamilia_nyererei
ENSUMAG00000002123	-	63	94.891	ENSPNAG00000016126	snrpb	90	56.221	Pygocentrus_nattereri
ENSUMAG00000002123	-	64	97.842	ENSRNOG00000006961	Snrpb	68	97.917	Rattus_norvegicus
ENSUMAG00000002123	-	64	97.842	ENSRBIG00000040505	SNRPB	60	99.270	Rhinopithecus_bieti
ENSUMAG00000002123	-	64	97.842	ENSRROG00000036094	SNRPB	59	99.270	Rhinopithecus_roxellana
ENSUMAG00000002123	-	64	97.842	ENSSBOG00000027310	SNRPB	59	99.270	Saimiri_boliviensis_boliviensis
ENSUMAG00000002123	-	64	97.122	ENSSHAG00000010394	SNRPB	72	82.081	Sarcophilus_harrisii
ENSUMAG00000002123	-	63	94.161	ENSSFOG00015002870	snrpb	58	94.161	Scleropages_formosus
ENSUMAG00000002123	-	63	94.891	ENSSMAG00000006766	snrpb	90	78.037	Scophthalmus_maximus
ENSUMAG00000002123	-	63	94.891	ENSSDUG00000018539	snrpb	79	76.190	Seriola_dumerili
ENSUMAG00000002123	-	63	94.891	ENSSLDG00000022391	snrpb	79	76.190	Seriola_lalandi_dorsalis
ENSUMAG00000002123	-	63	80.292	ENSSARG00000003084	SNRPB	59	80.292	Sorex_araneus
ENSUMAG00000002123	-	63	95.620	ENSSPUG00000015659	SNRPB	57	95.620	Sphenodon_punctatus
ENSUMAG00000002123	-	63	94.891	ENSSPAG00000021992	snrpb	79	76.190	Stegastes_partitus
ENSUMAG00000002123	-	63	99.270	ENSSSCG00000040857	-	59	99.270	Sus_scrofa
ENSUMAG00000002123	-	88	60.577	ENSSSCG00000011966	-	89	57.212	Sus_scrofa
ENSUMAG00000002123	-	65	94.286	ENSTGUG00000005684	SNRPB	59	94.286	Taeniopygia_guttata
ENSUMAG00000002123	-	63	94.891	ENSTRUG00000023094	snrpb	93	78.037	Takifugu_rubripes
ENSUMAG00000002123	-	63	94.891	ENSTNIG00000002991	snrpb	90	78.037	Tetraodon_nigroviridis
ENSUMAG00000002123	-	100	98.157	ENSUAMG00000005984	-	100	98.157	Ursus_americanus
ENSUMAG00000002123	-	64	97.122	ENSVVUG00000025654	-	57	98.540	Vulpes_vulpes
ENSUMAG00000002123	-	63	96.350	ENSXETG00000027266	snrpb	58	96.350	Xenopus_tropicalis
ENSUMAG00000002123	-	62	95.556	ENSXMAG00000028767	snrpb	58	95.556	Xiphophorus_maculatus