EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000002219 (Gene tree)
Gene ID: 103660649
Gene Symbol: RPUSD4
Alias: -
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 11689 bases
Position: chrKK498571.1:1709672-1721360
Accession: 103660649
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000002492	PseudoU_synth_2	PF00849.22	1.8e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000003078	RPUSD4-201	2307	XM_008688290	ENSUMAP00000002492	377 (aa)	XP_008686512	UPI0004DFDF9A

Gene Model

Click here to download ENSUMAG00000002219's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000002219's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000002219	RPUSD4	73	30.068	ENSUMAG00000018830	RPUSD3	80	30.068

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000002219	RPUSD4	100	81.698	ENSG00000165526	RPUSD4	100	81.698	Homo_sapiens
ENSUMAG00000002219	RPUSD4	84	53.231	ENSAPOG00000011024	rpusd4	81	53.231	Acanthochromis_polyacanthus
ENSUMAG00000002219	RPUSD4	62	95.495	ENSAMEG00000005953	-	100	95.495	Ailuropoda_melanoleuca
ENSUMAG00000002219	RPUSD4	100	97.878	ENSAMEG00000000127	-	100	97.878	Ailuropoda_melanoleuca
ENSUMAG00000002219	RPUSD4	86	50.606	ENSACIG00000003533	rpusd4	96	50.606	Amphilophus_citrinellus
ENSUMAG00000002219	RPUSD4	88	51.765	ENSAOCG00000015409	rpusd4	84	51.765	Amphiprion_ocellaris
ENSUMAG00000002219	RPUSD4	88	52.059	ENSAPEG00000018935	rpusd4	84	52.059	Amphiprion_percula
ENSUMAG00000002219	RPUSD4	82	53.674	ENSATEG00000008059	rpusd4	77	53.674	Anabas_testudineus
ENSUMAG00000002219	RPUSD4	73	63.082	ENSAPLG00000013250	RPUSD4	99	61.695	Anas_platyrhynchos
ENSUMAG00000002219	RPUSD4	97	60.054	ENSACAG00000000189	RPUSD4	100	60.054	Anolis_carolinensis
ENSUMAG00000002219	RPUSD4	98	80.863	ENSANAG00000024050	RPUSD4	99	80.863	Aotus_nancymaae
ENSUMAG00000002219	RPUSD4	89	51.917	ENSACLG00000020996	rpusd4	86	51.917	Astatotilapia_calliptera
ENSUMAG00000002219	RPUSD4	92	50.852	ENSAMXG00000031479	rpusd4	99	50.852	Astyanax_mexicanus
ENSUMAG00000002219	RPUSD4	100	80.159	ENSBTAG00000020900	RPUSD4	100	80.159	Bos_taurus
ENSUMAG00000002219	RPUSD4	98	82.162	ENSCJAG00000042850	RPUSD4	93	82.162	Callithrix_jacchus
ENSUMAG00000002219	RPUSD4	100	87.831	ENSCAFG00000010488	RPUSD4	100	87.831	Canis_familiaris
ENSUMAG00000002219	RPUSD4	100	87.831	ENSCAFG00020010621	RPUSD4	100	87.831	Canis_lupus_dingo
ENSUMAG00000002219	RPUSD4	100	81.003	ENSCHIG00000009975	RPUSD4	100	80.739	Capra_hircus
ENSUMAG00000002219	RPUSD4	100	84.085	ENSTSYG00000008456	RPUSD4	100	84.085	Carlito_syrichta
ENSUMAG00000002219	RPUSD4	68	77.907	ENSCAPG00000006040	RPUSD4	100	77.907	Cavia_aperea
ENSUMAG00000002219	RPUSD4	100	80.106	ENSCPOG00000014971	RPUSD4	100	80.106	Cavia_porcellus
ENSUMAG00000002219	RPUSD4	98	82.210	ENSCCAG00000027838	RPUSD4	99	82.210	Cebus_capucinus
ENSUMAG00000002219	RPUSD4	100	81.698	ENSCATG00000041570	RPUSD4	100	81.698	Cercocebus_atys
ENSUMAG00000002219	RPUSD4	100	82.759	ENSCLAG00000016553	RPUSD4	100	82.759	Chinchilla_lanigera
ENSUMAG00000002219	RPUSD4	100	81.963	ENSCSAG00000002274	RPUSD4	100	81.963	Chlorocebus_sabaeus
ENSUMAG00000002219	RPUSD4	73	84.477	ENSCHOG00000010249	RPUSD4	98	84.477	Choloepus_hoffmanni
ENSUMAG00000002219	RPUSD4	75	67.832	ENSCPBG00000011175	RPUSD4	99	67.832	Chrysemys_picta_bellii
ENSUMAG00000002219	RPUSD4	71	42.086	ENSCSAVG00000000872	-	54	42.086	Ciona_savignyi
ENSUMAG00000002219	RPUSD4	100	80.371	ENSCANG00000039684	RPUSD4	100	80.371	Colobus_angolensis_palliatus
ENSUMAG00000002219	RPUSD4	100	80.106	ENSCGRG00001024141	Rpusd4	100	80.106	Cricetulus_griseus_chok1gshd
ENSUMAG00000002219	RPUSD4	100	80.106	ENSCGRG00000014415	Rpusd4	100	80.106	Cricetulus_griseus_crigri
ENSUMAG00000002219	RPUSD4	51	43.590	ENSCSEG00000006462	-	85	43.590	Cynoglossus_semilaevis
ENSUMAG00000002219	RPUSD4	89	50.289	ENSCVAG00000000392	rpusd4	98	50.289	Cyprinodon_variegatus
ENSUMAG00000002219	RPUSD4	85	51.840	ENSCVAG00000008761	rpusd4	92	49.307	Cyprinodon_variegatus
ENSUMAG00000002219	RPUSD4	92	49.284	ENSDARG00000012674	rpusd4	97	49.284	Danio_rerio
ENSUMAG00000002219	RPUSD4	100	78.249	ENSDNOG00000020026	RPUSD4	100	78.249	Dasypus_novemcinctus
ENSUMAG00000002219	RPUSD4	100	82.228	ENSDORG00000016717	Rpusd4	100	82.228	Dipodomys_ordii
ENSUMAG00000002219	RPUSD4	99	80.108	ENSETEG00000013953	RPUSD4	98	80.108	Echinops_telfairi
ENSUMAG00000002219	RPUSD4	100	84.881	ENSEASG00005022982	RPUSD4	100	84.881	Equus_asinus_asinus
ENSUMAG00000002219	RPUSD4	100	84.615	ENSECAG00000000557	RPUSD4	100	84.615	Equus_caballus
ENSUMAG00000002219	RPUSD4	81	80.108	ENSEEUG00000014036	RPUSD4	81	80.108	Erinaceus_europaeus
ENSUMAG00000002219	RPUSD4	92	53.279	ENSELUG00000008075	rpusd4	95	53.279	Esox_lucius
ENSUMAG00000002219	RPUSD4	100	88.064	ENSFCAG00000029789	RPUSD4	100	88.064	Felis_catus
ENSUMAG00000002219	RPUSD4	88	59.940	ENSFALG00000005171	RPUSD4	98	59.940	Ficedula_albicollis
ENSUMAG00000002219	RPUSD4	98	82.749	ENSFDAG00000014307	RPUSD4	98	82.749	Fukomys_damarensis
ENSUMAG00000002219	RPUSD4	89	51.032	ENSFHEG00000004329	rpusd4	87	51.032	Fundulus_heteroclitus
ENSUMAG00000002219	RPUSD4	84	52.025	ENSGMOG00000017726	rpusd4	95	52.025	Gadus_morhua
ENSUMAG00000002219	RPUSD4	86	59.639	ENSGALG00000024326	RPUSD4	94	60.714	Gallus_gallus
ENSUMAG00000002219	RPUSD4	90	47.989	ENSGAFG00000021559	rpusd4	88	47.989	Gambusia_affinis
ENSUMAG00000002219	RPUSD4	87	49.102	ENSGACG00000001657	rpusd4	98	50.523	Gasterosteus_aculeatus
ENSUMAG00000002219	RPUSD4	89	63.988	ENSGAGG00000000132	RPUSD4	93	63.988	Gopherus_agassizii
ENSUMAG00000002219	RPUSD4	100	81.698	ENSGGOG00000016494	RPUSD4	100	81.698	Gorilla_gorilla
ENSUMAG00000002219	RPUSD4	89	51.917	ENSHBUG00000022838	rpusd4	86	51.917	Haplochromis_burtoni
ENSUMAG00000002219	RPUSD4	100	81.698	ENSHGLG00000002285	RPUSD4	100	81.698	Heterocephalus_glaber_female
ENSUMAG00000002219	RPUSD4	100	81.698	ENSHGLG00100006385	RPUSD4	100	81.698	Heterocephalus_glaber_male
ENSUMAG00000002219	RPUSD4	85	52.599	ENSHCOG00000006612	rpusd4	83	52.599	Hippocampus_comes
ENSUMAG00000002219	RPUSD4	88	51.453	ENSIPUG00000023879	rusd4	89	51.453	Ictalurus_punctatus
ENSUMAG00000002219	RPUSD4	97	82.418	ENSSTOG00000025280	RPUSD4	100	82.418	Ictidomys_tridecemlineatus
ENSUMAG00000002219	RPUSD4	98	82.210	ENSJJAG00000018673	Rpusd4	99	82.210	Jaculus_jaculus
ENSUMAG00000002219	RPUSD4	89	52.339	ENSKMAG00000021805	rpusd4	89	52.339	Kryptolebias_marmoratus
ENSUMAG00000002219	RPUSD4	85	52.308	ENSLBEG00000020394	rpusd4	90	52.308	Labrus_bergylta
ENSUMAG00000002219	RPUSD4	85	63.889	ENSLACG00000011028	RPUSD4	82	63.889	Latimeria_chalumnae
ENSUMAG00000002219	RPUSD4	86	47.095	ENSLOCG00000003124	rpusd4	87	47.095	Lepisosteus_oculatus
ENSUMAG00000002219	RPUSD4	100	81.432	ENSLAFG00000005211	RPUSD4	100	81.432	Loxodonta_africana
ENSUMAG00000002219	RPUSD4	100	82.228	ENSMFAG00000039513	RPUSD4	100	82.228	Macaca_fascicularis
ENSUMAG00000002219	RPUSD4	100	81.963	ENSMMUG00000007933	RPUSD4	100	81.963	Macaca_mulatta
ENSUMAG00000002219	RPUSD4	100	81.963	ENSMNEG00000027414	RPUSD4	100	81.963	Macaca_nemestrina
ENSUMAG00000002219	RPUSD4	100	81.167	ENSMLEG00000042461	RPUSD4	100	81.167	Mandrillus_leucophaeus
ENSUMAG00000002219	RPUSD4	85	49.848	ENSMAMG00000023839	rpusd4	85	49.848	Mastacembelus_armatus
ENSUMAG00000002219	RPUSD4	89	51.917	ENSMZEG00005011999	rpusd4	86	51.917	Maylandia_zebra
ENSUMAG00000002219	RPUSD4	73	64.260	ENSMGAG00000000840	RPUSD4	99	60.748	Meleagris_gallopavo
ENSUMAG00000002219	RPUSD4	100	79.045	ENSMAUG00000010280	Rpusd4	100	79.045	Mesocricetus_auratus
ENSUMAG00000002219	RPUSD4	98	83.558	ENSMICG00000015979	RPUSD4	98	83.558	Microcebus_murinus
ENSUMAG00000002219	RPUSD4	100	76.393	ENSMOCG00000000661	Rpusd4	100	76.393	Microtus_ochrogaster
ENSUMAG00000002219	RPUSD4	81	54.369	ENSMMOG00000021731	rpusd4	92	54.369	Mola_mola
ENSUMAG00000002219	RPUSD4	86	75.926	ENSMODG00000004521	RPUSD4	83	75.926	Monodelphis_domestica
ENSUMAG00000002219	RPUSD4	80	53.094	ENSMALG00000005839	rpusd4	97	51.703	Monopterus_albus
ENSUMAG00000002219	RPUSD4	100	77.984	MGP_CAROLIEiJ_G0031954	Rpusd4	100	77.984	Mus_caroli
ENSUMAG00000002219	RPUSD4	100	77.188	ENSMUSG00000032044	Rpusd4	100	77.188	Mus_musculus
ENSUMAG00000002219	RPUSD4	100	77.984	MGP_PahariEiJ_G0014819	Rpusd4	100	77.984	Mus_pahari
ENSUMAG00000002219	RPUSD4	100	77.188	MGP_SPRETEiJ_G0033078	Rpusd4	100	77.188	Mus_spretus
ENSUMAG00000002219	RPUSD4	99	92.473	ENSMPUG00000006608	RPUSD4	99	92.473	Mustela_putorius_furo
ENSUMAG00000002219	RPUSD4	97	81.918	ENSMLUG00000017328	-	96	81.918	Myotis_lucifugus
ENSUMAG00000002219	RPUSD4	67	83.858	ENSMLUG00000029348	-	100	83.858	Myotis_lucifugus
ENSUMAG00000002219	RPUSD4	99	80.914	ENSNGAG00000020847	Rpusd4	99	80.914	Nannospalax_galili
ENSUMAG00000002219	RPUSD4	87	52.096	ENSNBRG00000005207	rpusd4	96	52.096	Neolamprologus_brichardi
ENSUMAG00000002219	RPUSD4	100	81.698	ENSNLEG00000007465	RPUSD4	100	81.698	Nomascus_leucogenys
ENSUMAG00000002219	RPUSD4	98	69.730	ENSMEUG00000004370	RPUSD4	99	69.730	Notamacropus_eugenii
ENSUMAG00000002219	RPUSD4	70	59.623	ENSOPRG00000013141	-	100	59.623	Ochotona_princeps
ENSUMAG00000002219	RPUSD4	100	80.106	ENSODEG00000004577	RPUSD4	100	80.106	Octodon_degus
ENSUMAG00000002219	RPUSD4	89	51.895	ENSONIG00000018879	rpusd4	92	51.895	Oreochromis_niloticus
ENSUMAG00000002219	RPUSD4	77	68.027	ENSOANG00000007247	RPUSD4	95	67.677	Ornithorhynchus_anatinus
ENSUMAG00000002219	RPUSD4	99	80.637	ENSOCUG00000017039	RPUSD4	99	80.637	Oryctolagus_cuniculus
ENSUMAG00000002219	RPUSD4	95	47.802	ENSORLG00000002750	rpusd4	94	49.133	Oryzias_latipes
ENSUMAG00000002219	RPUSD4	89	48.286	ENSORLG00020002044	rpusd4	92	47.297	Oryzias_latipes_hni
ENSUMAG00000002219	RPUSD4	86	50.610	ENSORLG00015020034	rpusd4	92	47.849	Oryzias_latipes_hsok
ENSUMAG00000002219	RPUSD4	83	52.978	ENSOMEG00000004861	rpusd4	78	52.978	Oryzias_melastigma
ENSUMAG00000002219	RPUSD4	100	80.688	ENSOGAG00000008922	RPUSD4	100	80.688	Otolemur_garnettii
ENSUMAG00000002219	RPUSD4	98	81.081	ENSOARG00000012238	RPUSD4	99	80.159	Ovis_aries
ENSUMAG00000002219	RPUSD4	100	81.963	ENSPPAG00000042883	RPUSD4	93	81.963	Pan_paniscus
ENSUMAG00000002219	RPUSD4	100	88.329	ENSPPRG00000003081	RPUSD4	100	88.329	Panthera_pardus
ENSUMAG00000002219	RPUSD4	100	88.329	ENSPTIG00000012059	RPUSD4	100	88.329	Panthera_tigris_altaica
ENSUMAG00000002219	RPUSD4	100	81.698	ENSPTRG00000004454	RPUSD4	100	81.698	Pan_troglodytes
ENSUMAG00000002219	RPUSD4	100	81.698	ENSPANG00000015040	RPUSD4	100	81.698	Papio_anubis
ENSUMAG00000002219	RPUSD4	88	57.440	ENSPKIG00000023986	rpusd4	86	57.440	Paramormyrops_kingsleyae
ENSUMAG00000002219	RPUSD4	79	66.667	ENSPSIG00000014268	RPUSD4	95	66.667	Pelodiscus_sinensis
ENSUMAG00000002219	RPUSD4	84	51.543	ENSPMGG00000002806	rpusd4	89	51.393	Periophthalmus_magnuspinnatus
ENSUMAG00000002219	RPUSD4	100	74.005	ENSPEMG00000000278	Rpusd4	100	74.005	Peromyscus_maniculatus_bairdii
ENSUMAG00000002219	RPUSD4	80	45.970	ENSPMAG00000008183	rpusd4	97	45.970	Petromyzon_marinus
ENSUMAG00000002219	RPUSD4	90	75.516	ENSPCIG00000010212	RPUSD4	93	75.516	Phascolarctos_cinereus
ENSUMAG00000002219	RPUSD4	90	49.429	ENSPFOG00000019030	rpusd4	91	49.429	Poecilia_formosa
ENSUMAG00000002219	RPUSD4	90	50.000	ENSPLAG00000016848	rpusd4	88	50.000	Poecilia_latipinna
ENSUMAG00000002219	RPUSD4	90	48.851	ENSPMEG00000017534	rpusd4	88	48.851	Poecilia_mexicana
ENSUMAG00000002219	RPUSD4	88	49.263	ENSPREG00000005689	rpusd4	87	49.263	Poecilia_reticulata
ENSUMAG00000002219	RPUSD4	100	81.698	ENSPPYG00000004043	RPUSD4	100	81.698	Pongo_abelii
ENSUMAG00000002219	RPUSD4	80	78.261	ENSPCAG00000000753	RPUSD4	81	78.261	Procavia_capensis
ENSUMAG00000002219	RPUSD4	98	76.819	ENSPCOG00000020694	RPUSD4	100	76.819	Propithecus_coquereli
ENSUMAG00000002219	RPUSD4	100	82.759	ENSPVAG00000000988	RPUSD4	100	82.759	Pteropus_vampyrus
ENSUMAG00000002219	RPUSD4	89	51.622	ENSPNYG00000009652	rpusd4	86	51.622	Pundamilia_nyererei
ENSUMAG00000002219	RPUSD4	87	51.807	ENSPNAG00000012264	rpusd4	87	51.807	Pygocentrus_nattereri
ENSUMAG00000002219	RPUSD4	100	78.780	ENSRNOG00000011567	Rpusd4	100	78.780	Rattus_norvegicus
ENSUMAG00000002219	RPUSD4	100	81.167	ENSRBIG00000034842	RPUSD4	100	81.167	Rhinopithecus_bieti
ENSUMAG00000002219	RPUSD4	100	81.167	ENSRROG00000039753	RPUSD4	100	81.167	Rhinopithecus_roxellana
ENSUMAG00000002219	RPUSD4	98	80.863	ENSSBOG00000030413	RPUSD4	99	80.863	Saimiri_boliviensis_boliviensis
ENSUMAG00000002219	RPUSD4	80	75.748	ENSSHAG00000008304	RPUSD4	99	75.748	Sarcophilus_harrisii
ENSUMAG00000002219	RPUSD4	88	56.973	ENSSFOG00015006203	rpusd4	91	56.805	Scleropages_formosus
ENSUMAG00000002219	RPUSD4	89	50.877	ENSSMAG00000020978	rpusd4	88	50.877	Scophthalmus_maximus
ENSUMAG00000002219	RPUSD4	93	46.883	ENSSDUG00000013399	rpusd4	96	46.883	Seriola_dumerili
ENSUMAG00000002219	RPUSD4	93	46.612	ENSSLDG00000023507	rpusd4	96	46.612	Seriola_lalandi_dorsalis
ENSUMAG00000002219	RPUSD4	89	61.176	ENSSPUG00000001401	RPUSD4	94	62.059	Sphenodon_punctatus
ENSUMAG00000002219	RPUSD4	86	53.776	ENSSPAG00000012163	rpusd4	85	53.776	Stegastes_partitus
ENSUMAG00000002219	RPUSD4	98	85.714	ENSSSCG00000015233	RPUSD4	98	85.714	Sus_scrofa
ENSUMAG00000002219	RPUSD4	79	61.333	ENSTGUG00000000773	RPUSD4	100	61.333	Taeniopygia_guttata
ENSUMAG00000002219	RPUSD4	86	52.424	ENSTRUG00000012283	rpusd4	84	52.424	Takifugu_rubripes
ENSUMAG00000002219	RPUSD4	86	52.424	ENSTNIG00000014676	rpusd4	84	52.424	Tetraodon_nigroviridis
ENSUMAG00000002219	RPUSD4	100	83.024	ENSTTRG00000001555	RPUSD4	100	83.024	Tursiops_truncatus
ENSUMAG00000002219	RPUSD4	70	85.660	ENSVPAG00000001066	RPUSD4	100	85.660	Vicugna_pacos
ENSUMAG00000002219	RPUSD4	100	87.566	ENSVVUG00000020101	RPUSD4	100	87.566	Vulpes_vulpes
ENSUMAG00000002219	RPUSD4	86	50.904	ENSXCOG00000004676	rpusd4	86	50.602	Xiphophorus_couchianus
ENSUMAG00000002219	RPUSD4	95	47.480	ENSXMAG00000023351	rpusd4	96	47.480	Xiphophorus_maculatus