EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000002249 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 5148 bases
Position: chrAVOR01124123.1:141-5288
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000002553	APOBEC_N	PF08210.11	6.6e-42	1	1
ENSUMAP00000002553	APOBEC_C	PF05240.14	8.8e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000003156	-	618	-	ENSUMAP00000002553	205 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000002249's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000002249's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000002249	-	79	37.349	ENSUMAG00000014441	-	74	37.349
ENSUMAG00000002249	-	88	96.257	ENSUMAG00000014447	-	94	96.257
ENSUMAG00000002249	-	84	42.697	ENSUMAG00000016540	AICDA	92	43.704
ENSUMAG00000002249	-	93	34.500	ENSUMAG00000014435	-	89	34.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000002249	-	89	47.917	ENSG00000239713	APOBEC3G	92	47.917	Homo_sapiens
ENSUMAG00000002249	-	92	91.753	ENSAMEG00000010815	-	86	91.753	Ailuropoda_melanoleuca
ENSUMAG00000002249	-	87	46.842	ENSANAG00000028416	-	92	46.842	Aotus_nancymaae
ENSUMAG00000002249	-	82	49.704	ENSANAG00000027961	-	95	49.704	Aotus_nancymaae
ENSUMAG00000002249	-	88	50.777	ENSANAG00000031271	APOBEC3G	92	50.777	Aotus_nancymaae
ENSUMAG00000002249	-	91	46.766	ENSANAG00000020573	-	98	46.766	Aotus_nancymaae
ENSUMAG00000002249	-	87	50.000	ENSBTAG00000037800	-	98	49.730	Bos_taurus
ENSUMAG00000002249	-	93	42.927	ENSCJAG00000011578	-	81	42.927	Callithrix_jacchus
ENSUMAG00000002249	-	88	48.705	ENSCJAG00000023368	APOBEC3G	92	48.705	Callithrix_jacchus
ENSUMAG00000002249	-	63	55.814	ENSCAFG00000023589	-	88	55.814	Canis_familiaris
ENSUMAG00000002249	-	88	51.269	ENSCAFG00000015211	-	63	51.269	Canis_familiaris
ENSUMAG00000002249	-	91	49.510	ENSCAFG00020002641	-	84	52.500	Canis_lupus_dingo
ENSUMAG00000002249	-	88	55.000	ENSCAFG00020002661	-	83	51.759	Canis_lupus_dingo
ENSUMAG00000002249	-	88	48.925	ENSCHIG00000012694	-	90	49.730	Capra_hircus
ENSUMAG00000002249	-	89	50.259	ENSCCAG00000033147	-	93	50.259	Cebus_capucinus
ENSUMAG00000002249	-	91	44.776	ENSCCAG00000030928	-	95	44.776	Cebus_capucinus
ENSUMAG00000002249	-	88	48.969	ENSCCAG00000032232	-	92	48.969	Cebus_capucinus
ENSUMAG00000002249	-	88	43.814	ENSCCAG00000032509	-	93	43.814	Cebus_capucinus
ENSUMAG00000002249	-	78	49.398	ENSCSAG00000006376	APOBEC3G	75	49.398	Chlorocebus_sabaeus
ENSUMAG00000002249	-	79	47.059	ENSCANG00000029968	-	60	47.059	Colobus_angolensis_palliatus
ENSUMAG00000002249	-	86	35.912	ENSDNOG00000039749	-	79	35.912	Dasypus_novemcinctus
ENSUMAG00000002249	-	92	56.701	ENSEASG00005018643	-	83	56.701	Equus_asinus_asinus
ENSUMAG00000002249	-	92	56.701	ENSECAG00000022371	APOBEC3Z1B	85	56.701	Equus_caballus
ENSUMAG00000002249	-	92	56.701	ENSECAG00000032756	-	66	56.701	Equus_caballus
ENSUMAG00000002249	-	83	46.369	ENSGGOG00000013750	APOBEC3G	91	46.369	Gorilla_gorilla
ENSUMAG00000002249	-	89	47.619	ENSLAFG00000020906	-	90	47.619	Loxodonta_africana
ENSUMAG00000002249	-	87	50.829	ENSLAFG00000008890	-	88	50.829	Loxodonta_africana
ENSUMAG00000002249	-	87	50.276	ENSLAFG00000005275	-	98	50.276	Loxodonta_africana
ENSUMAG00000002249	-	90	52.308	ENSMFAG00000044711	APOBEC3G	82	52.308	Macaca_fascicularis
ENSUMAG00000002249	-	90	52.821	ENSMMUG00000039346	APOBEC3G	95	52.821	Macaca_mulatta
ENSUMAG00000002249	-	90	52.821	ENSMNEG00000038847	APOBEC3G	90	52.821	Macaca_nemestrina
ENSUMAG00000002249	-	92	49.746	ENSMLEG00000024444	APOBEC3G	89	49.746	Mandrillus_leucophaeus
ENSUMAG00000002249	-	91	47.500	ENSMICG00000043748	-	96	47.500	Microcebus_murinus
ENSUMAG00000002249	-	87	47.090	ENSMICG00000047191	-	98	47.090	Microcebus_murinus
ENSUMAG00000002249	-	87	68.478	ENSMPUG00000013235	-	93	68.478	Mustela_putorius_furo
ENSUMAG00000002249	-	88	39.474	ENSMLUG00000028652	-	83	39.378	Myotis_lucifugus
ENSUMAG00000002249	-	96	42.282	ENSMLUG00000008631	-	96	42.282	Myotis_lucifugus
ENSUMAG00000002249	-	90	40.933	ENSMLUG00000024957	-	88	40.933	Myotis_lucifugus
ENSUMAG00000002249	-	81	47.706	ENSMLUG00000026771	-	67	47.706	Myotis_lucifugus
ENSUMAG00000002249	-	93	41.935	ENSMLUG00000024853	-	100	41.935	Myotis_lucifugus
ENSUMAG00000002249	-	91	43.850	ENSMLUG00000000977	-	99	43.850	Myotis_lucifugus
ENSUMAG00000002249	-	89	39.791	ENSMLUG00000014565	-	100	39.791	Myotis_lucifugus
ENSUMAG00000002249	-	57	41.379	ENSMLUG00000022226	-	82	41.379	Myotis_lucifugus
ENSUMAG00000002249	-	86	39.560	ENSMLUG00000000517	-	100	39.560	Myotis_lucifugus
ENSUMAG00000002249	-	91	41.837	ENSMLUG00000023022	-	88	41.837	Myotis_lucifugus
ENSUMAG00000002249	-	78	50.575	ENSNLEG00000018922	-	88	50.575	Nomascus_leucogenys
ENSUMAG00000002249	-	88	39.785	ENSOPRG00000002326	-	99	39.785	Ochotona_princeps
ENSUMAG00000002249	-	76	47.619	ENSOCUG00000023532	-	63	47.619	Oryctolagus_cuniculus
ENSUMAG00000002249	-	92	51.309	ENSOGAG00000032518	-	99	51.309	Otolemur_garnettii
ENSUMAG00000002249	-	87	45.918	ENSOGAG00000024822	-	93	45.918	Otolemur_garnettii
ENSUMAG00000002249	-	87	50.811	ENSOARG00000016213	APOBEC3Z1	98	50.811	Ovis_aries
ENSUMAG00000002249	-	91	48.223	ENSPPAG00000033277	-	73	48.223	Pan_paniscus
ENSUMAG00000002249	-	90	49.744	ENSPTRG00000014387	APOBEC3G	93	49.744	Pan_troglodytes
ENSUMAG00000002249	-	90	50.256	ENSPPYG00000011833	APOBEC3G	89	50.256	Pongo_abelii
ENSUMAG00000002249	-	65	47.368	ENSPCAG00000001848	-	93	47.368	Procavia_capensis
ENSUMAG00000002249	-	87	47.644	ENSPCAG00000015518	-	62	47.644	Procavia_capensis
ENSUMAG00000002249	-	83	48.603	ENSPCOG00000016357	-	86	48.603	Propithecus_coquereli
ENSUMAG00000002249	-	92	45.178	ENSPVAG00000004045	-	97	45.178	Pteropus_vampyrus
ENSUMAG00000002249	-	90	49.231	ENSRBIG00000035436	APOBEC3G	84	49.231	Rhinopithecus_bieti
ENSUMAG00000002249	-	88	51.813	ENSSBOG00000026566	-	91	51.813	Saimiri_boliviensis_boliviensis
ENSUMAG00000002249	-	91	44.776	ENSSBOG00000029091	-	95	44.776	Saimiri_boliviensis_boliviensis
ENSUMAG00000002249	-	90	50.000	ENSSBOG00000021384	-	91	50.000	Saimiri_boliviensis_boliviensis
ENSUMAG00000002249	-	88	47.826	ENSSBOG00000025673	-	90	47.826	Saimiri_boliviensis_boliviensis
ENSUMAG00000002249	-	91	49.246	ENSSBOG00000023468	-	75	49.246	Saimiri_boliviensis_boliviensis
ENSUMAG00000002249	-	89	48.168	ENSSBOG00000018208	-	99	48.168	Saimiri_boliviensis_boliviensis
ENSUMAG00000002249	-	85	54.444	ENSTTRG00000009395	-	90	54.444	Tursiops_truncatus