EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000002574 (Gene tree)
Gene ID: -
Gene Symbol: SRL
Alias: SAR
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 12436 bases
Position: chrKK498627.1:5926516-5938951
Accession: 11295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000002974	MMR_HSR1	PF01926.23	3.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000003666	SRL-201	489	-	ENSUMAP00000002963	162 (aa)	-	-
ENSUMAT00000003685	SRL-202	2436	-	ENSUMAP00000002974	811 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000002574's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000002574's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000002574	SRL	56	96.703	ENSG00000185739	SRL	100	98.144	Homo_sapiens
ENSUMAG00000002574	SRL	55	82.658	ENSAPOG00000018093	srl	100	82.658	Acanthochromis_polyacanthus
ENSUMAG00000002574	SRL	54	76.417	ENSAPOG00000012432	SRL	98	74.720	Acanthochromis_polyacanthus
ENSUMAG00000002574	SRL	98	99.779	ENSAMEG00000010862	SRL	89	99.779	Ailuropoda_melanoleuca
ENSUMAG00000002574	SRL	56	82.119	ENSACIG00000015799	srl	100	82.119	Amphilophus_citrinellus
ENSUMAG00000002574	SRL	55	75.225	ENSACIG00000015419	SRL	99	75.225	Amphilophus_citrinellus
ENSUMAG00000002574	SRL	53	83.603	ENSAOCG00000007574	srl	99	83.603	Amphiprion_ocellaris
ENSUMAG00000002574	SRL	54	76.018	ENSAOCG00000017049	SRL	96	75.847	Amphiprion_ocellaris
ENSUMAG00000002574	SRL	56	81.718	ENSAPEG00000006911	srl	96	81.718	Amphiprion_percula
ENSUMAG00000002574	SRL	55	72.398	ENSAPEG00000006533	SRL	96	71.946	Amphiprion_percula
ENSUMAG00000002574	SRL	55	72.967	ENSATEG00000009643	SRL	52	72.967	Anabas_testudineus
ENSUMAG00000002574	SRL	55	83.032	ENSATEG00000024315	srl	94	83.032	Anabas_testudineus
ENSUMAG00000002574	SRL	54	90.508	ENSACAG00000016380	SRL	85	88.627	Anolis_carolinensis
ENSUMAG00000002574	SRL	56	81.498	ENSACLG00000027685	srl	99	80.963	Astatotilapia_calliptera
ENSUMAG00000002574	SRL	58	68.485	ENSACLG00000024674	SRL	61	68.485	Astatotilapia_calliptera
ENSUMAG00000002574	SRL	51	77.590	ENSAMXG00000038693	SRL	100	73.068	Astyanax_mexicanus
ENSUMAG00000002574	SRL	56	81.978	ENSAMXG00000018789	srl	88	81.978	Astyanax_mexicanus
ENSUMAG00000002574	SRL	56	97.149	ENSBTAG00000001078	SRL	81	79.136	Bos_taurus
ENSUMAG00000002574	SRL	56	96.703	ENSCJAG00000019750	SRL	96	96.703	Callithrix_jacchus
ENSUMAG00000002574	SRL	56	99.558	ENSCAFG00000019233	SRL	90	99.558	Canis_familiaris
ENSUMAG00000002574	SRL	98	86.284	ENSCAFG00020025024	SRL	98	86.534	Canis_lupus_dingo
ENSUMAG00000002574	SRL	99	74.696	ENSCHIG00000017927	SRL	82	79.173	Capra_hircus
ENSUMAG00000002574	SRL	56	98.242	ENSTSYG00000007919	SRL	100	98.840	Carlito_syrichta
ENSUMAG00000002574	SRL	56	98.009	ENSCPOG00000012643	SRL	96	98.009	Cavia_porcellus
ENSUMAG00000002574	SRL	56	90.549	ENSCCAG00000032646	SRL	100	98.153	Cebus_capucinus
ENSUMAG00000002574	SRL	98	81.895	ENSCATG00000032227	-	96	96.703	Cercocebus_atys
ENSUMAG00000002574	SRL	56	97.788	ENSCLAG00000016242	SRL	96	97.788	Chinchilla_lanigera
ENSUMAG00000002574	SRL	94	87.977	ENSCSAG00000009635	-	60	89.279	Chlorocebus_sabaeus
ENSUMAG00000002574	SRL	78	97.143	ENSCHOG00000001618	SRL	88	97.143	Choloepus_hoffmanni
ENSUMAG00000002574	SRL	68	93.299	ENSCPBG00000026371	SRL	96	89.032	Chrysemys_picta_bellii
ENSUMAG00000002574	SRL	51	60.192	ENSCING00000005231	-	91	60.345	Ciona_intestinalis
ENSUMAG00000002574	SRL	56	96.703	ENSCANG00000035872	SRL	100	98.144	Colobus_angolensis_palliatus
ENSUMAG00000002574	SRL	98	74.031	ENSCGRG00001016630	Srl	96	97.566	Cricetulus_griseus_chok1gshd
ENSUMAG00000002574	SRL	98	74.031	ENSCGRG00000005458	Srl	96	97.566	Cricetulus_griseus_crigri
ENSUMAG00000002574	SRL	56	82.561	ENSCSEG00000016151	srl	96	82.561	Cynoglossus_semilaevis
ENSUMAG00000002574	SRL	56	71.272	ENSCSEG00000011866	SRL	91	71.272	Cynoglossus_semilaevis
ENSUMAG00000002574	SRL	55	83.710	ENSCVAG00000003513	srl	96	83.710	Cyprinodon_variegatus
ENSUMAG00000002574	SRL	71	62.876	ENSCVAG00000022465	SRL	60	74.558	Cyprinodon_variegatus
ENSUMAG00000002574	SRL	55	83.333	ENSDARG00000104587	srl	96	83.333	Danio_rerio
ENSUMAG00000002574	SRL	99	75.779	ENSDNOG00000011643	SRL	99	74.639	Dasypus_novemcinctus
ENSUMAG00000002574	SRL	56	97.345	ENSDORG00000014807	Srl	96	97.345	Dipodomys_ordii
ENSUMAG00000002574	SRL	99	81.459	ENSEASG00005000942	SRL	81	84.718	Equus_asinus_asinus
ENSUMAG00000002574	SRL	99	79.684	ENSECAG00000024219	SRL	96	97.357	Equus_caballus
ENSUMAG00000002574	SRL	56	79.318	ENSELUG00000015616	srl	96	79.318	Esox_lucius
ENSUMAG00000002574	SRL	99	84.762	ENSFCAG00000022075	SRL	96	98.462	Felis_catus
ENSUMAG00000002574	SRL	56	91.372	ENSFALG00000004328	SRL	64	91.372	Ficedula_albicollis
ENSUMAG00000002574	SRL	56	98.230	ENSFDAG00000006199	SRL	96	98.230	Fukomys_damarensis
ENSUMAG00000002574	SRL	55	82.353	ENSFHEG00000011239	srl	95	82.353	Fundulus_heteroclitus
ENSUMAG00000002574	SRL	54	75.283	ENSFHEG00000011854	SRL	98	76.018	Fundulus_heteroclitus
ENSUMAG00000002574	SRL	54	81.015	ENSGMOG00000014954	srl	99	81.015	Gadus_morhua
ENSUMAG00000002574	SRL	56	90.949	ENSGALG00000038884	SRL	96	90.949	Gallus_gallus
ENSUMAG00000002574	SRL	56	81.858	ENSGAFG00000000010	srl	98	81.498	Gambusia_affinis
ENSUMAG00000002574	SRL	55	76.471	ENSGAFG00000016984	SRL	98	76.018	Gambusia_affinis
ENSUMAG00000002574	SRL	54	80.574	ENSGACG00000011332	srl	99	80.574	Gasterosteus_aculeatus
ENSUMAG00000002574	SRL	99	69.405	ENSGGOG00000011312	-	98	95.484	Gorilla_gorilla
ENSUMAG00000002574	SRL	56	81.498	ENSHBUG00000007581	srl	99	80.963	Haplochromis_burtoni
ENSUMAG00000002574	SRL	55	72.088	ENSHBUG00000015710	SRL	57	72.088	Haplochromis_burtoni
ENSUMAG00000002574	SRL	56	98.673	ENSHGLG00000015271	SRL	96	98.673	Heterocephalus_glaber_female
ENSUMAG00000002574	SRL	56	98.673	ENSHGLG00100019378	SRL	96	98.673	Heterocephalus_glaber_male
ENSUMAG00000002574	SRL	59	67.460	ENSHCOG00000001012	SRL	55	66.270	Hippocampus_comes
ENSUMAG00000002574	SRL	55	83.032	ENSHCOG00000008687	srl	98	83.032	Hippocampus_comes
ENSUMAG00000002574	SRL	54	70.183	ENSIPUG00000011609	SRL	89	71.990	Ictalurus_punctatus
ENSUMAG00000002574	SRL	57	79.355	ENSIPUG00000012513	srl	98	79.355	Ictalurus_punctatus
ENSUMAG00000002574	SRL	98	71.256	ENSSTOG00000021151	-	96	98.009	Ictidomys_tridecemlineatus
ENSUMAG00000002574	SRL	56	97.345	ENSJJAG00000016400	Srl	96	97.345	Jaculus_jaculus
ENSUMAG00000002574	SRL	55	82.579	ENSKMAG00000014115	srl	93	85.036	Kryptolebias_marmoratus
ENSUMAG00000002574	SRL	54	76.136	ENSKMAG00000019537	SRL	99	74.831	Kryptolebias_marmoratus
ENSUMAG00000002574	SRL	54	75.792	ENSLBEG00000013811	SRL	95	75.566	Labrus_bergylta
ENSUMAG00000002574	SRL	56	81.416	ENSLBEG00000026643	srl	96	81.416	Labrus_bergylta
ENSUMAG00000002574	SRL	56	86.093	ENSLACG00000002825	SRL	100	86.093	Latimeria_chalumnae
ENSUMAG00000002574	SRL	56	84.361	ENSLOCG00000002644	srl	97	84.361	Lepisosteus_oculatus
ENSUMAG00000002574	SRL	98	74.682	ENSLAFG00000006329	SRL	99	73.341	Loxodonta_africana
ENSUMAG00000002574	SRL	53	98.144	ENSMFAG00000037383	SRL	100	98.144	Macaca_fascicularis
ENSUMAG00000002574	SRL	98	83.305	ENSMNEG00000019236	-	96	96.909	Macaca_nemestrina
ENSUMAG00000002574	SRL	56	88.571	ENSMLEG00000032156	SRL	96	88.571	Mandrillus_leucophaeus
ENSUMAG00000002574	SRL	55	82.805	ENSMAMG00000023322	srl	94	82.805	Mastacembelus_armatus
ENSUMAG00000002574	SRL	54	73.128	ENSMAMG00000013756	SRL	53	73.026	Mastacembelus_armatus
ENSUMAG00000002574	SRL	58	68.485	ENSMZEG00005004010	SRL	62	68.485	Maylandia_zebra
ENSUMAG00000002574	SRL	56	81.498	ENSMZEG00005004548	srl	99	80.963	Maylandia_zebra
ENSUMAG00000002574	SRL	66	76.829	ENSMGAG00000009342	SRL	95	92.573	Meleagris_gallopavo
ENSUMAG00000002574	SRL	98	76.253	ENSMICG00000032307	SRL	96	96.484	Microcebus_murinus
ENSUMAG00000002574	SRL	56	97.345	ENSMOCG00000008208	Srl	96	97.345	Microtus_ochrogaster
ENSUMAG00000002574	SRL	54	72.527	ENSMMOG00000021572	SRL	99	72.527	Mola_mola
ENSUMAG00000002574	SRL	55	83.032	ENSMMOG00000013970	srl	98	83.032	Mola_mola
ENSUMAG00000002574	SRL	55	82.353	ENSMALG00000005039	srl	98	82.353	Monopterus_albus
ENSUMAG00000002574	SRL	51	76.386	ENSMALG00000000670	SRL	97	75.240	Monopterus_albus
ENSUMAG00000002574	SRL	98	70.964	MGP_CAROLIEiJ_G0020400	Srl	96	97.345	Mus_caroli
ENSUMAG00000002574	SRL	98	70.628	ENSMUSG00000022519	Srl	96	97.345	Mus_musculus
ENSUMAG00000002574	SRL	98	68.247	MGP_PahariEiJ_G0016108	Srl	68	81.440	Mus_pahari
ENSUMAG00000002574	SRL	98	70.833	MGP_SPRETEiJ_G0021294	Srl	96	97.345	Mus_spretus
ENSUMAG00000002574	SRL	98	89.202	ENSMPUG00000015025	SRL	98	87.239	Mustela_putorius_furo
ENSUMAG00000002574	SRL	98	80.340	ENSMLUG00000030733	SRL	99	78.979	Myotis_lucifugus
ENSUMAG00000002574	SRL	56	96.903	ENSNGAG00000019741	Srl	96	96.903	Nannospalax_galili
ENSUMAG00000002574	SRL	59	67.683	ENSNBRG00000002422	SRL	62	67.589	Neolamprologus_brichardi
ENSUMAG00000002574	SRL	56	81.498	ENSNBRG00000023775	srl	97	81.004	Neolamprologus_brichardi
ENSUMAG00000002574	SRL	56	90.487	ENSNLEG00000029051	SRL	96	89.890	Nomascus_leucogenys
ENSUMAG00000002574	SRL	99	69.357	ENSOPRG00000000477	-	99	68.230	Ochotona_princeps
ENSUMAG00000002574	SRL	56	96.460	ENSODEG00000013256	SRL	96	96.460	Octodon_degus
ENSUMAG00000002574	SRL	56	81.637	ENSONIG00000005192	srl	96	81.637	Oreochromis_niloticus
ENSUMAG00000002574	SRL	99	70.252	ENSOCUG00000025140	SRL	99	68.920	Oryctolagus_cuniculus
ENSUMAG00000002574	SRL	55	74.718	ENSORLG00000015064	SRL	97	74.718	Oryzias_latipes
ENSUMAG00000002574	SRL	55	82.353	ENSORLG00000008291	srl	91	85.271	Oryzias_latipes
ENSUMAG00000002574	SRL	55	82.127	ENSORLG00020019784	srl	79	85.013	Oryzias_latipes_hni
ENSUMAG00000002574	SRL	55	74.944	ENSORLG00020018173	SRL	97	74.944	Oryzias_latipes_hni
ENSUMAG00000002574	SRL	55	75.169	ENSORLG00015019063	SRL	97	75.169	Oryzias_latipes_hsok
ENSUMAG00000002574	SRL	55	81.674	ENSORLG00015009342	srl	91	81.674	Oryzias_latipes_hsok
ENSUMAG00000002574	SRL	63	66.603	ENSOMEG00000005682	SRL	53	73.187	Oryzias_melastigma
ENSUMAG00000002574	SRL	55	81.900	ENSOMEG00000010006	srl	98	82.045	Oryzias_melastigma
ENSUMAG00000002574	SRL	98	72.685	ENSOGAG00000029266	SRL	99	70.235	Otolemur_garnettii
ENSUMAG00000002574	SRL	70	97.566	ENSOARG00000003074	SRL	65	97.566	Ovis_aries
ENSUMAG00000002574	SRL	98	68.973	ENSPPAG00000024919	-	100	98.144	Pan_paniscus
ENSUMAG00000002574	SRL	56	98.681	ENSPPRG00000010274	SRL	100	99.536	Panthera_pardus
ENSUMAG00000002574	SRL	56	98.681	ENSPTIG00000015162	SRL	100	99.536	Panthera_tigris_altaica
ENSUMAG00000002574	SRL	100	68.114	ENSPTRG00000007712	SRL	100	98.144	Pan_troglodytes
ENSUMAG00000002574	SRL	56	97.130	ENSPANG00000013804	SRL	97	97.130	Papio_anubis
ENSUMAG00000002574	SRL	55	76.244	ENSPKIG00000024974	SRL	88	76.244	Paramormyrops_kingsleyae
ENSUMAG00000002574	SRL	55	84.389	ENSPKIG00000006405	srl	93	84.389	Paramormyrops_kingsleyae
ENSUMAG00000002574	SRL	98	59.529	ENSPSIG00000008586	SRL	67	77.217	Pelodiscus_sinensis
ENSUMAG00000002574	SRL	54	72.789	ENSPMGG00000023505	-	99	72.072	Periophthalmus_magnuspinnatus
ENSUMAG00000002574	SRL	56	82.675	ENSPMGG00000021081	srl	98	82.675	Periophthalmus_magnuspinnatus
ENSUMAG00000002574	SRL	56	97.566	ENSPEMG00000015842	Srl	96	97.566	Peromyscus_maniculatus_bairdii
ENSUMAG00000002574	SRL	51	68.129	ENSPMAG00000004786	srl	99	66.975	Petromyzon_marinus
ENSUMAG00000002574	SRL	56	96.239	ENSPCIG00000012128	SRL	99	96.239	Phascolarctos_cinereus
ENSUMAG00000002574	SRL	56	79.914	ENSPFOG00000011408	srl	95	79.914	Poecilia_formosa
ENSUMAG00000002574	SRL	56	81.099	ENSPLAG00000008017	srl	98	81.278	Poecilia_latipinna
ENSUMAG00000002574	SRL	55	75.566	ENSPLAG00000002932	SRL	98	74.434	Poecilia_latipinna
ENSUMAG00000002574	SRL	63	67.433	ENSPMEG00000005890	SRL	64	69.478	Poecilia_mexicana
ENSUMAG00000002574	SRL	56	81.637	ENSPMEG00000006745	srl	98	81.278	Poecilia_mexicana
ENSUMAG00000002574	SRL	56	81.416	ENSPREG00000007751	srl	99	81.416	Poecilia_reticulata
ENSUMAG00000002574	SRL	55	76.697	ENSPREG00000000315	SRL	98	75.566	Poecilia_reticulata
ENSUMAG00000002574	SRL	52	98.565	ENSPPYG00000007053	SRL	97	98.565	Pongo_abelii
ENSUMAG00000002574	SRL	86	89.157	ENSPCAG00000003378	-	87	89.157	Procavia_capensis
ENSUMAG00000002574	SRL	56	96.264	ENSPCOG00000023135	SRL	100	97.680	Propithecus_coquereli
ENSUMAG00000002574	SRL	99	80.622	ENSPVAG00000006586	SRL	83	83.819	Pteropus_vampyrus
ENSUMAG00000002574	SRL	56	81.498	ENSPNYG00000001200	srl	99	80.963	Pundamilia_nyererei
ENSUMAG00000002574	SRL	58	68.485	ENSPNYG00000003423	SRL	61	68.485	Pundamilia_nyererei
ENSUMAG00000002574	SRL	54	75.113	ENSPNAG00000007361	-	91	75.113	Pygocentrus_nattereri
ENSUMAG00000002574	SRL	56	80.702	ENSPNAG00000023106	srl	96	80.702	Pygocentrus_nattereri
ENSUMAG00000002574	SRL	98	70.833	ENSRNOG00000005269	Srl	99	70.444	Rattus_norvegicus
ENSUMAG00000002574	SRL	98	70.805	ENSRBIG00000042358	SRL	90	74.866	Rhinopithecus_bieti
ENSUMAG00000002574	SRL	98	71.169	ENSSBOG00000029273	SRL	96	96.703	Saimiri_boliviensis_boliviensis
ENSUMAG00000002574	SRL	90	88.889	ENSSHAG00000011715	-	58	96.035	Sarcophilus_harrisii
ENSUMAG00000002574	SRL	55	76.697	ENSSFOG00015021327	SRL	54	72.541	Scleropages_formosus
ENSUMAG00000002574	SRL	55	84.163	ENSSFOG00015009773	srl	97	83.002	Scleropages_formosus
ENSUMAG00000002574	SRL	55	81.778	ENSSMAG00000016274	srl	98	81.778	Scophthalmus_maximus
ENSUMAG00000002574	SRL	54	73.085	ENSSMAG00000002232	SRL	50	72.088	Scophthalmus_maximus
ENSUMAG00000002574	SRL	54	74.554	ENSSDUG00000009161	SRL	98	74.388	Seriola_dumerili
ENSUMAG00000002574	SRL	55	83.258	ENSSDUG00000010808	srl	97	83.258	Seriola_dumerili
ENSUMAG00000002574	SRL	55	83.258	ENSSLDG00000022024	srl	95	83.258	Seriola_lalandi_dorsalis
ENSUMAG00000002574	SRL	55	73.961	ENSSLDG00000014601	SRL	99	73.846	Seriola_lalandi_dorsalis
ENSUMAG00000002574	SRL	56	91.170	ENSSPUG00000016859	SRL	99	91.170	Sphenodon_punctatus
ENSUMAG00000002574	SRL	54	75.909	ENSSPAG00000014254	SRL	98	74.603	Stegastes_partitus
ENSUMAG00000002574	SRL	55	83.484	ENSSPAG00000019105	srl	94	83.484	Stegastes_partitus
ENSUMAG00000002574	SRL	99	78.806	ENSSSCG00000007949	SRL	99	97.768	Sus_scrofa
ENSUMAG00000002574	SRL	56	91.150	ENSTGUG00000003951	-	99	91.150	Taeniopygia_guttata
ENSUMAG00000002574	SRL	55	82.883	ENSTRUG00000006005	srl	94	82.883	Takifugu_rubripes
ENSUMAG00000002574	SRL	51	75.779	ENSTRUG00000013310	SRL	56	74.353	Takifugu_rubripes
ENSUMAG00000002574	SRL	55	82.658	ENSTNIG00000009739	srl	94	82.658	Tetraodon_nigroviridis
ENSUMAG00000002574	SRL	77	97.500	ENSTTRG00000002709	-	69	97.500	Tursiops_truncatus
ENSUMAG00000002574	SRL	100	99.383	ENSUAMG00000005701	SRL	100	99.383	Ursus_americanus
ENSUMAG00000002574	SRL	98	86.233	ENSVVUG00000016331	-	87	86.375	Vulpes_vulpes
ENSUMAG00000002574	SRL	56	89.381	ENSXETG00000017313	srl	100	89.381	Xenopus_tropicalis
ENSUMAG00000002574	SRL	52	84.561	ENSXCOG00000010424	srl	97	84.561	Xiphophorus_couchianus
ENSUMAG00000002574	SRL	55	76.018	ENSXCOG00000014584	SRL	98	75.566	Xiphophorus_couchianus
ENSUMAG00000002574	SRL	56	81.858	ENSXMAG00000004625	srl	91	81.858	Xiphophorus_maculatus
ENSUMAG00000002574	SRL	63	67.176	ENSXMAG00000027598	SRL	66	70.080	Xiphophorus_maculatus