EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000002758 (Gene tree)
Gene ID: 103672802
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 71322 bases
Position: chrKK498665.1:12265384-12336705
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000004238	Fip1	PF05182.13	3.3e-25	1	1
ENSUMAP00000004299	Fip1	PF05182.13	8.7e-25	1	1
ENSUMAP00000004269	Fip1	PF05182.13	8.7e-25	1	1
ENSUMAP00000004317	Fip1	PF05182.13	8.7e-25	1	1
ENSUMAP00000004267	Fip1	PF05182.13	9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000005191	-	1557	-	ENSUMAP00000004267	518 (aa)	-	-
ENSUMAT00000005193	-	1518	-	ENSUMAP00000004269	505 (aa)	-	-
ENSUMAT00000005158	-	1635	-	ENSUMAP00000004238	544 (aa)	-	-
ENSUMAT00000005263	-	1524	-	ENSUMAP00000004317	507 (aa)	-	-
ENSUMAT00000005241	-	1515	-	ENSUMAP00000004299	504 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000002758's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000002758's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000002758	-	63	80.220	ENSACIG00000001454	fip1l1b	73	60.377	Amphilophus_citrinellus
ENSUMAG00000002758	-	90	56.805	ENSAPEG00000022229	fip1l1b	84	56.426	Amphiprion_percula
ENSUMAG00000002758	-	90	62.105	ENSATEG00000021757	fip1l1b	83	57.500	Anabas_testudineus
ENSUMAG00000002758	-	99	75.912	ENSAPLG00000003042	-	98	74.910	Anas_platyrhynchos
ENSUMAG00000002758	-	99	86.532	ENSACAG00000010556	-	97	78.407	Anolis_carolinensis
ENSUMAG00000002758	-	90	61.684	ENSACLG00000010418	fip1l1b	84	56.539	Astatotilapia_calliptera
ENSUMAG00000002758	-	60	39.490	ENSAMXG00000031045	fip1l1a	61	42.857	Astyanax_mexicanus
ENSUMAG00000002758	-	100	96.117	ENSBTAG00000020653	FIP1L1	91	96.117	Bos_taurus
ENSUMAG00000002758	-	100	96.117	ENSCHIG00000025903	-	93	96.117	Capra_hircus
ENSUMAG00000002758	-	99	86.770	ENSCAPG00000009569	-	96	91.489	Cavia_aperea
ENSUMAG00000002758	-	100	96.584	ENSCPOG00000010770	-	95	96.584	Cavia_porcellus
ENSUMAG00000002758	-	100	85.185	ENSCPBG00000025019	-	87	87.500	Chrysemys_picta_bellii
ENSUMAG00000002758	-	100	94.707	ENSCGRG00001018568	Fip1l1	91	94.707	Cricetulus_griseus_chok1gshd
ENSUMAG00000002758	-	100	94.707	ENSCGRG00000000208	Fip1l1	91	94.707	Cricetulus_griseus_crigri
ENSUMAG00000002758	-	95	55.311	ENSCSEG00000006583	fip1l1b	83	58.910	Cynoglossus_semilaevis
ENSUMAG00000002758	-	90	61.345	ENSCVAG00000023435	fip1l1b	69	53.034	Cyprinodon_variegatus
ENSUMAG00000002758	-	79	42.271	ENSDARG00000043328	fip1l1a	60	44.495	Danio_rerio
ENSUMAG00000002758	-	95	81.649	ENSETEG00000018271	-	100	76.753	Echinops_telfairi
ENSUMAG00000002758	-	99	99.202	ENSEASG00005019566	-	92	99.202	Equus_asinus_asinus
ENSUMAG00000002758	-	69	95.989	ENSEEUG00000004965	-	67	96.000	Erinaceus_europaeus
ENSUMAG00000002758	-	98	43.836	ENSELUG00000004607	fip1l1a	84	41.339	Esox_lucius
ENSUMAG00000002758	-	88	61.099	ENSFHEG00000003843	fip1l1b	70	54.930	Fundulus_heteroclitus
ENSUMAG00000002758	-	94	51.098	ENSGMOG00000004913	fip1l1b	74	51.667	Gadus_morhua
ENSUMAG00000002758	-	74	32.011	ENSGMOG00000012065	-	56	35.714	Gadus_morhua
ENSUMAG00000002758	-	99	81.605	ENSGALG00000013943	-	82	80.412	Gallus_gallus
ENSUMAG00000002758	-	90	61.297	ENSGAFG00000008253	fip1l1b	69	56.573	Gambusia_affinis
ENSUMAG00000002758	-	100	86.111	ENSGAGG00000009763	-	87	87.500	Gopherus_agassizii
ENSUMAG00000002758	-	90	61.684	ENSHBUG00000013978	fip1l1b	87	56.539	Haplochromis_burtoni
ENSUMAG00000002758	-	91	61.429	ENSHCOG00000015834	fip1l1b	68	57.353	Hippocampus_comes
ENSUMAG00000002758	-	91	60.208	ENSKMAG00000021938	fip1l1b	69	55.742	Kryptolebias_marmoratus
ENSUMAG00000002758	-	99	66.089	ENSLACG00000011991	fip1l1a	94	64.659	Latimeria_chalumnae
ENSUMAG00000002758	-	98	58.161	ENSLOCG00000014127	fip1l1b	83	58.607	Lepisosteus_oculatus
ENSUMAG00000002758	-	90	61.684	ENSMAMG00000004535	fip1l1b	82	57.442	Mastacembelus_armatus
ENSUMAG00000002758	-	90	61.684	ENSMZEG00005023828	fip1l1b	84	56.539	Maylandia_zebra
ENSUMAG00000002758	-	99	81.076	ENSMGAG00000011885	-	97	81.746	Meleagris_gallopavo
ENSUMAG00000002758	-	99	86.742	ENSMAUG00000010526	Fip1l1	91	82.703	Mesocricetus_auratus
ENSUMAG00000002758	-	99	92.571	ENSMOCG00000008020	Fip1l1	90	94.013	Microtus_ochrogaster
ENSUMAG00000002758	-	90	54.123	ENSMMOG00000008262	fip1l1b	85	55.111	Mola_mola
ENSUMAG00000002758	-	82	90.308	ENSMODG00000020654	-	85	89.890	Monodelphis_domestica
ENSUMAG00000002758	-	90	55.464	ENSMALG00000000838	fip1l1b	83	52.191	Monopterus_albus
ENSUMAG00000002758	-	99	93.182	MGP_CAROLIEiJ_G0027304	Fip1l1	91	94.962	Mus_caroli
ENSUMAG00000002758	-	99	93.182	ENSMUSG00000029227	Fip1l1	91	94.962	Mus_musculus
ENSUMAG00000002758	-	99	92.803	MGP_PahariEiJ_G0017085	Fip1l1	91	94.458	Mus_pahari
ENSUMAG00000002758	-	99	93.182	MGP_SPRETEiJ_G0028299	Fip1l1	91	94.962	Mus_spretus
ENSUMAG00000002758	-	100	96.015	ENSNGAG00000008849	Fip1l1	91	96.015	Nannospalax_galili
ENSUMAG00000002758	-	94	56.859	ENSNBRG00000017832	fip1l1b	84	56.707	Neolamprologus_brichardi
ENSUMAG00000002758	-	52	60.702	ENSMEUG00000012782	-	61	89.655	Notamacropus_eugenii
ENSUMAG00000002758	-	94	56.461	ENSONIG00000008785	fip1l1b	84	55.221	Oreochromis_niloticus
ENSUMAG00000002758	-	99	80.645	ENSOANG00000003384	-	98	79.964	Ornithorhynchus_anatinus
ENSUMAG00000002758	-	95	55.200	ENSORLG00000004397	fip1l1b	83	55.126	Oryzias_latipes
ENSUMAG00000002758	-	95	55.400	ENSORLG00020008716	fip1l1b	83	55.319	Oryzias_latipes_hni
ENSUMAG00000002758	-	95	55.400	ENSORLG00015006736	fip1l1b	69	57.037	Oryzias_latipes_hsok
ENSUMAG00000002758	-	91	46.787	ENSOMEG00000015730	fip1l1b	69	61.081	Oryzias_melastigma
ENSUMAG00000002758	-	100	98.024	ENSOARG00000018767	-	95	98.024	Ovis_aries
ENSUMAG00000002758	-	100	94.707	ENSPEMG00000002025	Fip1l1	93	94.877	Peromyscus_maniculatus_bairdii
ENSUMAG00000002758	-	63	92.500	ENSPCIG00000019318	-	97	92.568	Phascolarctos_cinereus
ENSUMAG00000002758	-	94	52.767	ENSPFOG00000014745	fip1l1b	69	56.938	Poecilia_formosa
ENSUMAG00000002758	-	90	56.415	ENSPLAG00000010954	fip1l1b	69	55.869	Poecilia_latipinna
ENSUMAG00000002758	-	90	56.818	ENSPMEG00000019187	fip1l1b	69	55.634	Poecilia_mexicana
ENSUMAG00000002758	-	74	48.980	ENSPREG00000012535	fip1l1b	77	48.303	Poecilia_reticulata
ENSUMAG00000002758	-	72	97.297	ENSPVAG00000000716	-	61	97.297	Pteropus_vampyrus
ENSUMAG00000002758	-	50	52.107	ENSPNYG00000015976	fip1l1b	58	59.917	Pundamilia_nyererei
ENSUMAG00000002758	-	53	43.682	ENSPNAG00000009853	fip1l1a	53	46.445	Pygocentrus_nattereri
ENSUMAG00000002758	-	99	93.182	ENSRNOG00000002275	Fip1l1	91	93.573	Rattus_norvegicus
ENSUMAG00000002758	-	99	92.449	ENSSHAG00000015789	-	94	92.463	Sarcophilus_harrisii
ENSUMAG00000002758	-	82	58.962	ENSSFOG00015017653	fip1l1b	75	56.642	Scleropages_formosus
ENSUMAG00000002758	-	90	61.181	ENSSMAG00000013444	fip1l1b	84	59.514	Scophthalmus_maximus
ENSUMAG00000002758	-	90	61.895	ENSSDUG00000004117	fip1l1b	84	56.707	Seriola_dumerili
ENSUMAG00000002758	-	90	62.447	ENSSLDG00000024099	fip1l1b	84	60.896	Seriola_lalandi_dorsalis
ENSUMAG00000002758	-	96	87.908	ENSSARG00000001973	-	87	87.908	Sorex_araneus
ENSUMAG00000002758	-	94	57.229	ENSSPAG00000017564	fip1l1b	84	56.707	Stegastes_partitus
ENSUMAG00000002758	-	99	79.010	ENSTGUG00000007834	-	98	78.782	Taeniopygia_guttata
ENSUMAG00000002758	-	85	62.567	ENSTRUG00000001545	fip1l1b	72	57.576	Takifugu_rubripes
ENSUMAG00000002758	-	95	57.576	ENSTNIG00000004104	fip1l1b	71	54.023	Tetraodon_nigroviridis
ENSUMAG00000002758	-	70	93.064	ENSTBEG00000007839	-	79	93.064	Tupaia_belangeri
ENSUMAG00000002758	-	100	88.051	ENSVPAG00000011574	-	95	88.051	Vicugna_pacos
ENSUMAG00000002758	-	98	68.561	ENSXETG00000011679	fip1l1	76	72.059	Xenopus_tropicalis
ENSUMAG00000002758	-	90	61.297	ENSXMAG00000017620	fip1l1b	69	56.573	Xiphophorus_maculatus