EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000002934 (Gene tree)
Gene ID: 103664804
Gene Symbol: LARP1
Alias: KIAA0731|LARP|MGC19556
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 29866 bases
Position: chrKK498603.1:18763737-18793602
Accession: 103664804
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000003676	La	PF05383.17	8.6e-21	1	1
ENSUMAP00000003648	La	PF05383.17	9.3e-21	1	1
ENSUMAP00000003609	La	PF05383.17	1e-20	1	1
ENSUMAP00000003616	La	PF05383.17	1e-20	1	1
ENSUMAP00000003641	La	PF05383.17	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000004501	LARP1-205	2592	-	ENSUMAP00000003676	863 (aa)	-	-
ENSUMAT00000004435	LARP1-202	2802	XM_008692724	ENSUMAP00000003616	933 (aa)	XP_008690946	-
ENSUMAT00000004464	LARP1-203	2982	-	ENSUMAP00000003641	993 (aa)	-	-
ENSUMAT00000004426	LARP1-201	2805	-	ENSUMAP00000003609	934 (aa)	-	-
ENSUMAT00000004471	LARP1-204	2742	-	ENSUMAP00000003648	913 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000002934's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000002934's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000002934	LARP1	93	61.493	ENSUMAG00000007373	LARP1B	95	60.044

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000002934	LARP1	99	93.678	ENSG00000155506	LARP1	100	95.652	Homo_sapiens
ENSUMAG00000002934	LARP1	84	89.944	ENSAPOG00000020685	larp1	81	89.944	Acanthochromis_polyacanthus
ENSUMAG00000002934	LARP1	99	95.785	ENSAMEG00000016673	LARP1	99	95.785	Ailuropoda_melanoleuca
ENSUMAG00000002934	LARP1	96	69.773	ENSACIG00000012994	larp1	85	66.270	Amphilophus_citrinellus
ENSUMAG00000002934	LARP1	84	70.865	ENSAOCG00000007792	larp1	97	68.409	Amphiprion_ocellaris
ENSUMAG00000002934	LARP1	96	69.066	ENSAPEG00000022246	larp1	85	68.345	Amphiprion_percula
ENSUMAG00000002934	LARP1	96	68.537	ENSATEG00000013523	larp1	84	66.771	Anabas_testudineus
ENSUMAG00000002934	LARP1	96	82.534	ENSAPLG00000007559	LARP1	99	82.782	Anas_platyrhynchos
ENSUMAG00000002934	LARP1	99	78.122	ENSACAG00000004071	LARP1	99	78.261	Anolis_carolinensis
ENSUMAG00000002934	LARP1	99	94.099	ENSANAG00000029949	LARP1	99	92.760	Aotus_nancymaae
ENSUMAG00000002934	LARP1	96	69.085	ENSACLG00000015256	larp1	95	66.391	Astatotilapia_calliptera
ENSUMAG00000002934	LARP1	96	71.972	ENSAMXG00000000859	larp1	85	70.011	Astyanax_mexicanus
ENSUMAG00000002934	LARP1	98	94.374	ENSBTAG00000008443	LARP1	86	94.374	Bos_taurus
ENSUMAG00000002934	LARP1	99	94.099	ENSCJAG00000004454	LARP1	93	94.099	Callithrix_jacchus
ENSUMAG00000002934	LARP1	99	95.996	ENSCAFG00000017639	LARP1	99	95.996	Canis_familiaris
ENSUMAG00000002934	LARP1	93	95.745	ENSCAFG00020023860	LARP1	99	95.745	Canis_lupus_dingo
ENSUMAG00000002934	LARP1	98	93.843	ENSCHIG00000014414	LARP1	87	93.823	Capra_hircus
ENSUMAG00000002934	LARP1	99	94.800	ENSTSYG00000013732	LARP1	99	94.800	Carlito_syrichta
ENSUMAG00000002934	LARP1	90	90.201	ENSCAPG00000013865	LARP1	87	90.791	Cavia_aperea
ENSUMAG00000002934	LARP1	98	93.524	ENSCPOG00000003377	LARP1	99	93.524	Cavia_porcellus
ENSUMAG00000002934	LARP1	99	94.099	ENSCCAG00000025201	LARP1	93	94.099	Cebus_capucinus
ENSUMAG00000002934	LARP1	99	95.991	ENSCATG00000030675	LARP1	93	94.099	Cercocebus_atys
ENSUMAG00000002934	LARP1	99	96.100	ENSCLAG00000012755	LARP1	99	96.100	Chinchilla_lanigera
ENSUMAG00000002934	LARP1	93	95.848	ENSCSAG00000010800	LARP1	99	97.069	Chlorocebus_sabaeus
ENSUMAG00000002934	LARP1	92	94.022	ENSCHOG00000012716	LARP1	87	94.022	Choloepus_hoffmanni
ENSUMAG00000002934	LARP1	96	83.995	ENSCPBG00000002173	LARP1	93	79.747	Chrysemys_picta_bellii
ENSUMAG00000002934	LARP1	99	93.678	ENSCANG00000037418	LARP1	93	93.678	Colobus_angolensis_palliatus
ENSUMAG00000002934	LARP1	99	92.835	ENSCGRG00001016913	Larp1	88	92.835	Cricetulus_griseus_chok1gshd
ENSUMAG00000002934	LARP1	95	91.218	ENSCGRG00000009916	Larp1	99	91.548	Cricetulus_griseus_crigri
ENSUMAG00000002934	LARP1	99	65.953	ENSCSEG00000016431	larp1	88	65.851	Cynoglossus_semilaevis
ENSUMAG00000002934	LARP1	96	70.090	ENSCVAG00000022687	larp1	84	68.593	Cyprinodon_variegatus
ENSUMAG00000002934	LARP1	96	67.552	ENSDARG00000101722	larp1	92	64.513	Danio_rerio
ENSUMAG00000002934	LARP1	99	92.857	ENSDNOG00000012073	LARP1	86	92.857	Dasypus_novemcinctus
ENSUMAG00000002934	LARP1	99	95.233	ENSDORG00000002897	Larp1	97	96.350	Dipodomys_ordii
ENSUMAG00000002934	LARP1	95	92.188	ENSETEG00000020251	LARP1	100	93.864	Echinops_telfairi
ENSUMAG00000002934	LARP1	99	94.731	ENSEASG00005001070	LARP1	86	94.731	Equus_asinus_asinus
ENSUMAG00000002934	LARP1	99	94.731	ENSECAG00000017002	LARP1	68	94.731	Equus_caballus
ENSUMAG00000002934	LARP1	97	88.829	ENSEEUG00000001065	LARP1	99	88.829	Erinaceus_europaeus
ENSUMAG00000002934	LARP1	98	65.456	ENSELUG00000019403	larp1	87	65.975	Esox_lucius
ENSUMAG00000002934	LARP1	99	95.680	ENSFCAG00000000592	LARP1	93	95.860	Felis_catus
ENSUMAG00000002934	LARP1	83	84.688	ENSFALG00000008335	LARP1	97	80.097	Ficedula_albicollis
ENSUMAG00000002934	LARP1	99	93.572	ENSFDAG00000021125	LARP1	99	93.572	Fukomys_damarensis
ENSUMAG00000002934	LARP1	59	59.328	ENSFHEG00000020307	larp1	92	65.758	Fundulus_heteroclitus
ENSUMAG00000002934	LARP1	96	84.364	ENSGALG00000040109	LARP1	93	78.556	Gallus_gallus
ENSUMAG00000002934	LARP1	96	82.448	ENSGAGG00000025113	LARP1	98	78.895	Gopherus_agassizii
ENSUMAG00000002934	LARP1	99	93.783	ENSGGOG00000006048	LARP1	93	93.783	Gorilla_gorilla
ENSUMAG00000002934	LARP1	96	69.473	ENSHBUG00000020762	larp1	95	69.036	Haplochromis_burtoni
ENSUMAG00000002934	LARP1	97	92.918	ENSHGLG00000006267	LARP1	86	92.136	Heterocephalus_glaber_female
ENSUMAG00000002934	LARP1	99	93.045	ENSHGLG00100014230	-	99	93.045	Heterocephalus_glaber_male
ENSUMAG00000002934	LARP1	98	80.681	ENSHGLG00100003395	-	87	80.900	Heterocephalus_glaber_male
ENSUMAG00000002934	LARP1	85	86.630	ENSHCOG00000010786	larp1	81	86.630	Hippocampus_comes
ENSUMAG00000002934	LARP1	96	69.606	ENSIPUG00000019105	Larp1	87	69.606	Ictalurus_punctatus
ENSUMAG00000002934	LARP1	99	96.425	ENSSTOG00000005678	LARP1	99	96.425	Ictidomys_tridecemlineatus
ENSUMAG00000002934	LARP1	99	87.250	ENSJJAG00000016950	Larp1	89	87.250	Jaculus_jaculus
ENSUMAG00000002934	LARP1	96	69.222	ENSKMAG00000018468	larp1	95	66.322	Kryptolebias_marmoratus
ENSUMAG00000002934	LARP1	94	70.401	ENSLBEG00000027172	larp1	85	65.887	Labrus_bergylta
ENSUMAG00000002934	LARP1	96	75.404	ENSLOCG00000012457	larp1	90	75.376	Lepisosteus_oculatus
ENSUMAG00000002934	LARP1	99	92.202	ENSLAFG00000008991	LARP1	88	92.202	Loxodonta_africana
ENSUMAG00000002934	LARP1	99	93.678	ENSMFAG00000031651	LARP1	93	93.678	Macaca_fascicularis
ENSUMAG00000002934	LARP1	99	95.666	ENSMMUG00000009411	LARP1	98	96.792	Macaca_mulatta
ENSUMAG00000002934	LARP1	96	92.842	ENSMNEG00000039294	LARP1	99	93.505	Macaca_nemestrina
ENSUMAG00000002934	LARP1	99	93.994	ENSMLEG00000035142	LARP1	93	93.994	Mandrillus_leucophaeus
ENSUMAG00000002934	LARP1	99	66.024	ENSMAMG00000021788	larp1	87	65.923	Mastacembelus_armatus
ENSUMAG00000002934	LARP1	96	69.085	ENSMZEG00005009345	larp1	95	66.391	Maylandia_zebra
ENSUMAG00000002934	LARP1	96	83.487	ENSMGAG00000005696	LARP1	96	80.973	Meleagris_gallopavo
ENSUMAG00000002934	LARP1	99	92.835	ENSMAUG00000001385	Larp1	88	92.835	Mesocricetus_auratus
ENSUMAG00000002934	LARP1	99	94.093	ENSMICG00000000837	LARP1	99	93.729	Microcebus_murinus
ENSUMAG00000002934	LARP1	99	92.940	ENSMOCG00000008920	Larp1	88	92.940	Microtus_ochrogaster
ENSUMAG00000002934	LARP1	95	53.911	ENSMMOG00000013364	larp1	78	57.729	Mola_mola
ENSUMAG00000002934	LARP1	98	81.243	ENSMODG00000008663	LARP1	98	81.243	Monodelphis_domestica
ENSUMAG00000002934	LARP1	91	73.174	ENSMALG00000017180	larp1	92	71.074	Monopterus_albus
ENSUMAG00000002934	LARP1	99	92.518	MGP_CAROLIEiJ_G0016383	Larp1	88	92.518	Mus_caroli
ENSUMAG00000002934	LARP1	99	92.624	ENSMUSG00000037331	Larp1	88	92.624	Mus_musculus
ENSUMAG00000002934	LARP1	99	93.045	MGP_PahariEiJ_G0017518	Larp1	88	93.045	Mus_pahari
ENSUMAG00000002934	LARP1	99	92.729	MGP_SPRETEiJ_G0017225	Larp1	88	92.729	Mus_spretus
ENSUMAG00000002934	LARP1	82	93.023	ENSMPUG00000013564	LARP1	84	95.000	Mustela_putorius_furo
ENSUMAG00000002934	LARP1	98	91.226	ENSMLUG00000002608	LARP1	99	91.226	Myotis_lucifugus
ENSUMAG00000002934	LARP1	99	93.933	ENSNGAG00000001098	Larp1	98	94.304	Nannospalax_galili
ENSUMAG00000002934	LARP1	96	69.550	ENSNBRG00000008963	larp1	90	66.810	Neolamprologus_brichardi
ENSUMAG00000002934	LARP1	99	92.741	ENSNLEG00000016588	LARP1	99	92.958	Nomascus_leucogenys
ENSUMAG00000002934	LARP1	99	75.080	ENSMEUG00000002957	LARP1	99	75.080	Notamacropus_eugenii
ENSUMAG00000002934	LARP1	99	93.467	ENSOPRG00000013014	LARP1	99	93.467	Ochotona_princeps
ENSUMAG00000002934	LARP1	99	92.729	ENSODEG00000010824	LARP1	99	92.729	Octodon_degus
ENSUMAG00000002934	LARP1	98	68.454	ENSONIG00000017308	larp1	86	68.454	Oreochromis_niloticus
ENSUMAG00000002934	LARP1	99	81.675	ENSOANG00000005096	LARP1	97	81.675	Ornithorhynchus_anatinus
ENSUMAG00000002934	LARP1	99	96.533	ENSOCUG00000013066	LARP1	85	97.677	Oryctolagus_cuniculus
ENSUMAG00000002934	LARP1	96	68.136	ENSORLG00000000824	larp1	96	69.682	Oryzias_latipes
ENSUMAG00000002934	LARP1	96	68.136	ENSORLG00020022241	larp1	84	66.702	Oryzias_latipes_hni
ENSUMAG00000002934	LARP1	96	68.100	ENSORLG00015007538	larp1	85	66.667	Oryzias_latipes_hsok
ENSUMAG00000002934	LARP1	96	68.100	ENSOMEG00000003134	larp1	85	66.667	Oryzias_melastigma
ENSUMAG00000002934	LARP1	99	93.572	ENSOGAG00000016750	LARP1	99	93.572	Otolemur_garnettii
ENSUMAG00000002934	LARP1	98	94.759	ENSOARG00000009893	LARP1	98	94.759	Ovis_aries
ENSUMAG00000002934	LARP1	99	93.783	ENSPPAG00000042993	LARP1	93	93.783	Pan_paniscus
ENSUMAG00000002934	LARP1	99	95.675	ENSPPRG00000009780	LARP1	93	95.675	Panthera_pardus
ENSUMAG00000002934	LARP1	99	96.186	ENSPTIG00000007013	LARP1	93	96.186	Panthera_tigris_altaica
ENSUMAG00000002934	LARP1	98	95.852	ENSPTRG00000017447	LARP1	92	93.949	Pan_troglodytes
ENSUMAG00000002934	LARP1	99	95.991	ENSPANG00000008080	LARP1	93	94.099	Papio_anubis
ENSUMAG00000002934	LARP1	96	71.821	ENSPKIG00000010096	larp1	85	69.645	Paramormyrops_kingsleyae
ENSUMAG00000002934	LARP1	97	67.749	ENSPKIG00000017153	-	85	68.070	Paramormyrops_kingsleyae
ENSUMAG00000002934	LARP1	96	71.579	ENSPMGG00000011599	larp1	88	71.546	Periophthalmus_magnuspinnatus
ENSUMAG00000002934	LARP1	99	94.800	ENSPEMG00000022523	Larp1	99	94.800	Peromyscus_maniculatus_bairdii
ENSUMAG00000002934	LARP1	96	85.322	ENSPCIG00000019242	LARP1	77	82.680	Phascolarctos_cinereus
ENSUMAG00000002934	LARP1	96	67.774	ENSPFOG00000005836	larp1	85	66.040	Poecilia_formosa
ENSUMAG00000002934	LARP1	96	69.344	ENSPLAG00000008936	larp1	84	67.484	Poecilia_latipinna
ENSUMAG00000002934	LARP1	96	67.885	ENSPMEG00000013656	larp1	85	66.144	Poecilia_mexicana
ENSUMAG00000002934	LARP1	96	67.553	ENSPREG00000005726	larp1	94	66.071	Poecilia_reticulata
ENSUMAG00000002934	LARP1	99	88.924	ENSPCAG00000006407	LARP1	99	88.608	Procavia_capensis
ENSUMAG00000002934	LARP1	99	85.774	ENSPCOG00000016949	LARP1	99	89.357	Propithecus_coquereli
ENSUMAG00000002934	LARP1	99	94.211	ENSPVAG00000002262	LARP1	86	94.211	Pteropus_vampyrus
ENSUMAG00000002934	LARP1	96	69.085	ENSPNYG00000007938	larp1	95	66.391	Pundamilia_nyererei
ENSUMAG00000002934	LARP1	98	71.332	ENSPNAG00000021427	larp1	84	72.037	Pygocentrus_nattereri
ENSUMAG00000002934	LARP1	99	95.125	ENSRNOG00000031544	Larp1	98	95.728	Rattus_norvegicus
ENSUMAG00000002934	LARP1	99	93.783	ENSRBIG00000038005	LARP1	93	93.783	Rhinopithecus_bieti
ENSUMAG00000002934	LARP1	99	93.678	ENSRROG00000034073	LARP1	99	93.393	Rhinopithecus_roxellana
ENSUMAG00000002934	LARP1	99	96.100	ENSSBOG00000019816	LARP1	98	97.235	Saimiri_boliviensis_boliviensis
ENSUMAG00000002934	LARP1	98	82.503	ENSSHAG00000011115	LARP1	98	82.503	Sarcophilus_harrisii
ENSUMAG00000002934	LARP1	96	69.677	ENSSFOG00015020304	larp1	93	66.117	Scleropages_formosus
ENSUMAG00000002934	LARP1	96	70.882	ENSSFOG00015018058	-	84	68.066	Scleropages_formosus
ENSUMAG00000002934	LARP1	96	69.942	ENSSMAG00000007468	larp1	84	70.023	Scophthalmus_maximus
ENSUMAG00000002934	LARP1	96	68.311	ENSSDUG00000000268	larp1	95	69.528	Seriola_dumerili
ENSUMAG00000002934	LARP1	89	70.347	ENSSLDG00000016505	larp1	95	68.023	Seriola_lalandi_dorsalis
ENSUMAG00000002934	LARP1	61	98.598	ENSSARG00000013907	-	87	94.526	Sorex_araneus
ENSUMAG00000002934	LARP1	96	83.897	ENSSPUG00000012179	-	84	79.641	Sphenodon_punctatus
ENSUMAG00000002934	LARP1	96	69.077	ENSSPAG00000003910	larp1	85	67.294	Stegastes_partitus
ENSUMAG00000002934	LARP1	99	94.316	ENSSSCG00000017069	LARP1	99	94.072	Sus_scrofa
ENSUMAG00000002934	LARP1	96	81.136	ENSTGUG00000000704	LARP1	100	81.352	Taeniopygia_guttata
ENSUMAG00000002934	LARP1	96	68.981	ENSTRUG00000009470	larp1	87	64.041	Takifugu_rubripes
ENSUMAG00000002934	LARP1	96	90.011	ENSTBEG00000003381	LARP1	100	91.638	Tupaia_belangeri
ENSUMAG00000002934	LARP1	98	94.798	ENSTTRG00000015934	LARP1	99	94.798	Tursiops_truncatus
ENSUMAG00000002934	LARP1	99	96.733	ENSUAMG00000019334	LARP1	86	96.733	Ursus_americanus
ENSUMAG00000002934	LARP1	93	95.745	ENSVVUG00000004644	LARP1	99	95.745	Vulpes_vulpes
ENSUMAG00000002934	LARP1	96	77.572	ENSXETG00000008413	larp1	90	74.000	Xenopus_tropicalis
ENSUMAG00000002934	LARP1	77	77.594	ENSXCOG00000004022	larp1	76	74.860	Xiphophorus_couchianus
ENSUMAG00000002934	LARP1	96	67.553	ENSXMAG00000018780	larp1	84	66.071	Xiphophorus_maculatus