EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000003167 (Gene tree)
Gene ID: 103660673
Gene Symbol: PRDM10
Alias: KIAA1231|MGC131802|PFM7
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 59057 bases
Position: chrKK498571.1:5019502-5078558
Accession: 13995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000004455	zf-C2H2	PF00096.26	1.5e-33	1	5
ENSUMAP00000004455	zf-C2H2	PF00096.26	1.5e-33	2	5
ENSUMAP00000004455	zf-C2H2	PF00096.26	1.5e-33	3	5
ENSUMAP00000004455	zf-C2H2	PF00096.26	1.5e-33	4	5
ENSUMAP00000004455	zf-C2H2	PF00096.26	1.5e-33	5	5
ENSUMAP00000004430	zf-C2H2	PF00096.26	4.2e-33	1	5
ENSUMAP00000004430	zf-C2H2	PF00096.26	4.2e-33	2	5
ENSUMAP00000004430	zf-C2H2	PF00096.26	4.2e-33	3	5
ENSUMAP00000004430	zf-C2H2	PF00096.26	4.2e-33	4	5
ENSUMAP00000004430	zf-C2H2	PF00096.26	4.2e-33	5	5
ENSUMAP00000004441	zf-C2H2	PF00096.26	3.3e-28	1	4
ENSUMAP00000004441	zf-C2H2	PF00096.26	3.3e-28	2	4
ENSUMAP00000004441	zf-C2H2	PF00096.26	3.3e-28	3	4
ENSUMAP00000004441	zf-C2H2	PF00096.26	3.3e-28	4	4
ENSUMAP00000004404	zf-C2H2	PF00096.26	4.9e-28	1	4
ENSUMAP00000004404	zf-C2H2	PF00096.26	4.9e-28	2	4
ENSUMAP00000004404	zf-C2H2	PF00096.26	4.9e-28	3	4
ENSUMAP00000004404	zf-C2H2	PF00096.26	4.9e-28	4	4
ENSUMAP00000004441	zf-met	PF12874.7	4.7e-09	1	2
ENSUMAP00000004441	zf-met	PF12874.7	4.7e-09	2	2
ENSUMAP00000004404	zf-met	PF12874.7	2.4e-06	1	2
ENSUMAP00000004404	zf-met	PF12874.7	2.4e-06	2	2
ENSUMAP00000004455	zf-met	PF12874.7	5.5e-06	1	2
ENSUMAP00000004455	zf-met	PF12874.7	5.5e-06	2	2
ENSUMAP00000004430	zf-met	PF12874.7	7.3e-06	1	2
ENSUMAP00000004430	zf-met	PF12874.7	7.3e-06	2	2
ENSUMAP00000004455	zf-C2H2_jaz	PF12171.8	8.3e-17	1	1
ENSUMAP00000004430	zf-C2H2_jaz	PF12171.8	2.2e-16	1	1
ENSUMAP00000004441	zf-C2H2_jaz	PF12171.8	4.9e-14	1	1
ENSUMAP00000004404	zf-C2H2_jaz	PF12171.8	3.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000005402	PRDM10-203	3351	-	ENSUMAP00000004441	1116 (aa)	-	-
ENSUMAT00000005419	PRDM10-204	3201	-	ENSUMAP00000004455	1066 (aa)	-	-
ENSUMAT00000005358	PRDM10-201	3519	-	ENSUMAP00000004404	1172 (aa)	-	-
ENSUMAT00000005390	PRDM10-202	3498	-	ENSUMAP00000004430	1165 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000003167's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000003167's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000003167	PRDM10	51	36.842	ENSUMAG00000001754	ZFAT	75	36.842
ENSUMAG00000003167	PRDM10	52	32.174	ENSUMAG00000003733	PRDM5	83	36.264

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000003167	PRDM10	99	94.995	ENSG00000170325	PRDM10	100	94.451	Homo_sapiens
ENSUMAG00000003167	PRDM10	99	99.526	ENSAMEG00000002425	PRDM10	100	94.750	Ailuropoda_melanoleuca
ENSUMAG00000003167	PRDM10	99	85.970	ENSAPLG00000004858	PRDM10	100	83.291	Anas_platyrhynchos
ENSUMAG00000003167	PRDM10	97	94.737	ENSANAG00000022064	PRDM10	100	77.835	Aotus_nancymaae
ENSUMAG00000003167	PRDM10	99	94.787	ENSBTAG00000019001	PRDM10	100	93.630	Bos_taurus
ENSUMAG00000003167	PRDM10	99	95.085	ENSCJAG00000009235	PRDM10	100	92.472	Callithrix_jacchus
ENSUMAG00000003167	PRDM10	98	98.655	ENSCAFG00000010164	PRDM10	100	95.524	Canis_familiaris
ENSUMAG00000003167	PRDM10	100	95.589	ENSCAFG00020010152	PRDM10	100	95.589	Canis_lupus_dingo
ENSUMAG00000003167	PRDM10	99	94.882	ENSCHIG00000026530	PRDM10	100	92.024	Capra_hircus
ENSUMAG00000003167	PRDM10	99	96.223	ENSTSYG00000000544	PRDM10	100	93.590	Carlito_syrichta
ENSUMAG00000003167	PRDM10	99	86.486	ENSCAPG00000017296	PRDM10	97	91.379	Cavia_aperea
ENSUMAG00000003167	PRDM10	99	85.318	ENSCPOG00000000389	PRDM10	97	92.208	Cavia_porcellus
ENSUMAG00000003167	PRDM10	99	95.274	ENSCCAG00000024567	PRDM10	100	92.900	Cebus_capucinus
ENSUMAG00000003167	PRDM10	99	96.216	ENSCATG00000040031	PRDM10	100	93.322	Cercocebus_atys
ENSUMAG00000003167	PRDM10	98	91.714	ENSCLAG00000014605	PRDM10	99	96.104	Chinchilla_lanigera
ENSUMAG00000003167	PRDM10	99	96.216	ENSCSAG00000002202	PRDM10	100	93.664	Chlorocebus_sabaeus
ENSUMAG00000003167	PRDM10	99	86.347	ENSCPBG00000026880	PRDM10	99	81.962	Chrysemys_picta_bellii
ENSUMAG00000003167	PRDM10	99	95.369	ENSCANG00000032669	PRDM10	100	93.157	Colobus_angolensis_palliatus
ENSUMAG00000003167	PRDM10	97	94.805	ENSCGRG00001021647	Prdm10	99	91.070	Cricetulus_griseus_chok1gshd
ENSUMAG00000003167	PRDM10	97	94.805	ENSCGRG00000006562	Prdm10	99	91.070	Cricetulus_griseus_crigri
ENSUMAG00000003167	PRDM10	80	95.300	ENSDNOG00000001366	PRDM10	95	92.316	Dasypus_novemcinctus
ENSUMAG00000003167	PRDM10	98	95.134	ENSDORG00000014292	Prdm10	99	93.925	Dipodomys_ordii
ENSUMAG00000003167	PRDM10	99	97.156	ENSEASG00005022914	PRDM10	100	94.683	Equus_asinus_asinus
ENSUMAG00000003167	PRDM10	99	97.062	ENSECAG00000011499	PRDM10	100	96.695	Equus_caballus
ENSUMAG00000003167	PRDM10	99	97.630	ENSFCAG00000004111	PRDM10	96	95.276	Felis_catus
ENSUMAG00000003167	PRDM10	99	85.552	ENSFALG00000004873	PRDM10	100	80.433	Ficedula_albicollis
ENSUMAG00000003167	PRDM10	97	93.506	ENSFDAG00000017311	PRDM10	100	88.861	Fukomys_damarensis
ENSUMAG00000003167	PRDM10	99	85.782	ENSGALG00000033660	PRDM10	99	83.511	Gallus_gallus
ENSUMAG00000003167	PRDM10	99	64.768	ENSGACG00000012293	prdm10	98	64.935	Gasterosteus_aculeatus
ENSUMAG00000003167	PRDM10	99	84.760	ENSGAGG00000012523	PRDM10	99	81.919	Gopherus_agassizii
ENSUMAG00000003167	PRDM10	99	95.472	ENSGGOG00000015359	PRDM10	100	93.083	Gorilla_gorilla
ENSUMAG00000003167	PRDM10	98	91.862	ENSHGLG00000001106	PRDM10	97	92.822	Heterocephalus_glaber_female
ENSUMAG00000003167	PRDM10	98	92.034	ENSHGLG00100002350	PRDM10	97	92.822	Heterocephalus_glaber_male
ENSUMAG00000003167	PRDM10	99	94.896	ENSSTOG00000002015	PRDM10	100	92.985	Ictidomys_tridecemlineatus
ENSUMAG00000003167	PRDM10	95	92.737	ENSJJAG00000021493	Prdm10	92	94.805	Jaculus_jaculus
ENSUMAG00000003167	PRDM10	99	91.463	ENSLAFG00000031867	PRDM10	100	88.955	Loxodonta_africana
ENSUMAG00000003167	PRDM10	99	96.121	ENSMFAG00000031008	PRDM10	100	93.236	Macaca_fascicularis
ENSUMAG00000003167	PRDM10	99	96.121	ENSMMUG00000017555	PRDM10	100	93.236	Macaca_mulatta
ENSUMAG00000003167	PRDM10	99	95.648	ENSMNEG00000036493	PRDM10	100	93.151	Macaca_nemestrina
ENSUMAG00000003167	PRDM10	93	98.734	ENSMLEG00000042028	PRDM10	99	98.113	Mandrillus_leucophaeus
ENSUMAG00000003167	PRDM10	99	85.647	ENSMGAG00000001112	PRDM10	100	81.417	Meleagris_gallopavo
ENSUMAG00000003167	PRDM10	99	95.080	ENSMICG00000013888	PRDM10	100	92.808	Microcebus_murinus
ENSUMAG00000003167	PRDM10	97	94.805	ENSMOCG00000021853	Prdm10	100	90.597	Microtus_ochrogaster
ENSUMAG00000003167	PRDM10	81	86.720	ENSMODG00000004979	PRDM10	99	87.755	Monodelphis_domestica
ENSUMAG00000003167	PRDM10	97	94.805	ENSMUSG00000042496	Prdm10	100	89.722	Mus_musculus
ENSUMAG00000003167	PRDM10	97	94.805	MGP_SPRETEiJ_G0033061	-	100	89.915	Mus_spretus
ENSUMAG00000003167	PRDM10	99	99.147	ENSMPUG00000008711	PRDM10	99	96.569	Mustela_putorius_furo
ENSUMAG00000003167	PRDM10	99	94.806	ENSMLUG00000013051	PRDM10	100	92.479	Myotis_lucifugus
ENSUMAG00000003167	PRDM10	99	94.173	ENSNGAG00000000580	Prdm10	100	94.455	Nannospalax_galili
ENSUMAG00000003167	PRDM10	99	95.648	ENSNLEG00000007488	PRDM10	100	93.322	Nomascus_leucogenys
ENSUMAG00000003167	PRDM10	100	90.816	ENSODEG00000005309	PRDM10	100	90.816	Octodon_degus
ENSUMAG00000003167	PRDM10	99	81.701	ENSOANG00000000577	-	100	78.801	Ornithorhynchus_anatinus
ENSUMAG00000003167	PRDM10	99	93.939	ENSOCUG00000003736	PRDM10	100	91.260	Oryctolagus_cuniculus
ENSUMAG00000003167	PRDM10	99	93.968	ENSOGAG00000010723	PRDM10	100	91.553	Otolemur_garnettii
ENSUMAG00000003167	PRDM10	99	94.976	ENSOARG00000014507	PRDM10	100	92.110	Ovis_aries
ENSUMAG00000003167	PRDM10	99	95.377	ENSPPAG00000042881	PRDM10	100	92.912	Pan_paniscus
ENSUMAG00000003167	PRDM10	99	97.630	ENSPPRG00000007002	PRDM10	100	95.111	Panthera_pardus
ENSUMAG00000003167	PRDM10	99	97.536	ENSPTIG00000013331	PRDM10	100	95.026	Panthera_tigris_altaica
ENSUMAG00000003167	PRDM10	99	95.472	ENSPTRG00000004477	PRDM10	100	93.083	Pan_troglodytes
ENSUMAG00000003167	PRDM10	99	95.648	ENSPANG00000017470	PRDM10	100	93.151	Papio_anubis
ENSUMAG00000003167	PRDM10	97	93.506	ENSPEMG00000014985	Prdm10	100	90.279	Peromyscus_maniculatus_bairdii
ENSUMAG00000003167	PRDM10	99	95.467	ENSPPYG00000004061	PRDM10	100	93.077	Pongo_abelii
ENSUMAG00000003167	PRDM10	89	92.727	ENSPCAG00000014514	PRDM10	92	92.727	Procavia_capensis
ENSUMAG00000003167	PRDM10	100	86.675	ENSPCOG00000023406	PRDM10	100	79.846	Propithecus_coquereli
ENSUMAG00000003167	PRDM10	99	96.789	ENSPVAG00000012764	PRDM10	100	94.359	Pteropus_vampyrus
ENSUMAG00000003167	PRDM10	97	94.805	ENSRNOG00000007853	Prdm10	100	90.136	Rattus_norvegicus
ENSUMAG00000003167	PRDM10	99	95.467	ENSRBIG00000030924	PRDM10	100	92.991	Rhinopithecus_bieti
ENSUMAG00000003167	PRDM10	99	95.467	ENSRROG00000034334	PRDM10	100	92.991	Rhinopithecus_roxellana
ENSUMAG00000003167	PRDM10	99	95.090	ENSSBOG00000008773	PRDM10	100	92.479	Saimiri_boliviensis_boliviensis
ENSUMAG00000003167	PRDM10	99	87.394	ENSSHAG00000004503	PRDM10	99	85.872	Sarcophilus_harrisii
ENSUMAG00000003167	PRDM10	69	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSUMAG00000003167	PRDM10	99	85.258	ENSSPUG00000001178	PRDM10	97	85.258	Sphenodon_punctatus
ENSUMAG00000003167	PRDM10	99	94.240	ENSSSCG00000015243	PRDM10	100	91.926	Sus_scrofa
ENSUMAG00000003167	PRDM10	99	85.217	ENSTGUG00000000530	PRDM10	100	82.198	Taeniopygia_guttata
ENSUMAG00000003167	PRDM10	92	97.464	ENSTBEG00000007221	PRDM10	94	92.257	Tupaia_belangeri
ENSUMAG00000003167	PRDM10	99	92.635	ENSTTRG00000009189	PRDM10	100	89.316	Tursiops_truncatus
ENSUMAG00000003167	PRDM10	91	100.000	ENSUAMG00000018832	PRDM10	96	99.801	Ursus_americanus
ENSUMAG00000003167	PRDM10	99	98.673	ENSVVUG00000019878	PRDM10	100	95.798	Vulpes_vulpes
ENSUMAG00000003167	PRDM10	99	72.616	ENSXETG00000032173	PRDM10	100	69.314	Xenopus_tropicalis