EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000003579 (Gene tree)
Gene ID: 103668823
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 331062 bases
Position: chrKK498627.1:8416145-8747206
Accession: 18222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000004452	Fox-1_C	PF12414.8	2.3e-09	1	1
ENSUMAP00000004440	Fox-1_C	PF12414.8	8.1e-07	1	1
ENSUMAP00000004440	RRM_1	PF00076.22	2.8e-18	1	1
ENSUMAP00000004452	RRM_1	PF00076.22	2.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000005401	RBFOX1-201	1080	-	ENSUMAP00000004440	359 (aa)	-	-
ENSUMAT00000005415	RBFOX1-202	1077	-	ENSUMAP00000004452	358 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000003579's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000003579's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000003579	RBFOX1	62	71.749	ENSUMAG00000016785	RBFOX2	59	71.622
ENSUMAG00000003579	RBFOX1	51	34.146	ENSUMAG00000019585	PABPC4	62	34.146

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000003579	RBFOX1	99	85.570	ENSG00000078328	RBFOX1	95	99.441	Homo_sapiens
ENSUMAG00000003579	RBFOX1	100	66.838	ENSAPOG00000003197	rbfox1	100	66.080	Acanthochromis_polyacanthus
ENSUMAG00000003579	RBFOX1	70	97.200	ENSAMEG00000008605	RBFOX1	100	97.200	Ailuropoda_melanoleuca
ENSUMAG00000003579	RBFOX1	65	57.249	ENSACIG00000005478	rbfox1	68	57.249	Amphilophus_citrinellus
ENSUMAG00000003579	RBFOX1	60	74.468	ENSAOCG00000008283	rbfox1	80	74.468	Amphiprion_ocellaris
ENSUMAG00000003579	RBFOX1	95	67.227	ENSAPEG00000010636	rbfox1	100	68.079	Amphiprion_percula
ENSUMAG00000003579	RBFOX1	65	71.032	ENSATEG00000007513	rbfox1	82	72.803	Anabas_testudineus
ENSUMAG00000003579	RBFOX1	99	80.051	ENSAPLG00000013263	RBFOX1	98	80.051	Anas_platyrhynchos
ENSUMAG00000003579	RBFOX1	97	74.545	ENSACAG00000004013	RBFOX1	98	73.980	Anolis_carolinensis
ENSUMAG00000003579	RBFOX1	100	87.071	ENSANAG00000029527	RBFOX1	100	86.807	Aotus_nancymaae
ENSUMAG00000003579	RBFOX1	64	87.281	ENSAMXG00000002431	rbfox1	65	87.281	Astyanax_mexicanus
ENSUMAG00000003579	RBFOX1	97	84.896	ENSBTAG00000007210	RBFOX1	97	84.699	Bos_taurus
ENSUMAG00000003579	RBFOX1	99	87.071	ENSCJAG00000017351	RBFOX1	98	86.807	Callithrix_jacchus
ENSUMAG00000003579	RBFOX1	99	86.329	ENSCAFG00000019082	RBFOX1	100	86.329	Canis_familiaris
ENSUMAG00000003579	RBFOX1	100	88.430	ENSCAFG00020024881	RBFOX1	100	88.430	Canis_lupus_dingo
ENSUMAG00000003579	RBFOX1	99	85.570	ENSCHIG00000023549	RBFOX1	100	85.570	Capra_hircus
ENSUMAG00000003579	RBFOX1	97	89.071	ENSTSYG00000005334	RBFOX1	97	88.798	Carlito_syrichta
ENSUMAG00000003579	RBFOX1	97	85.117	ENSCAPG00000017669	RBFOX1	99	85.117	Cavia_aperea
ENSUMAG00000003579	RBFOX1	100	83.503	ENSCPOG00000011314	RBFOX1	100	83.503	Cavia_porcellus
ENSUMAG00000003579	RBFOX1	97	84.896	ENSCCAG00000023031	RBFOX1	95	81.967	Cebus_capucinus
ENSUMAG00000003579	RBFOX1	99	85.570	ENSCATG00000033816	RBFOX1	98	88.636	Cercocebus_atys
ENSUMAG00000003579	RBFOX1	99	84.518	ENSCLAG00000012761	RBFOX1	100	84.518	Chinchilla_lanigera
ENSUMAG00000003579	RBFOX1	92	85.246	ENSCSAG00000008739	RBFOX1	97	85.246	Chlorocebus_sabaeus
ENSUMAG00000003579	RBFOX1	87	96.923	ENSCHOG00000012843	RBFOX1	74	96.923	Choloepus_hoffmanni
ENSUMAG00000003579	RBFOX1	99	80.407	ENSCPBG00000026626	RBFOX1	98	80.000	Chrysemys_picta_bellii
ENSUMAG00000003579	RBFOX1	97	85.417	ENSCANG00000033125	RBFOX1	95	82.514	Colobus_angolensis_palliatus
ENSUMAG00000003579	RBFOX1	100	82.620	ENSCGRG00001013729	Rbfox1	100	82.620	Cricetulus_griseus_chok1gshd
ENSUMAG00000003579	RBFOX1	100	82.620	ENSCGRG00000003272	Rbfox1	100	82.620	Cricetulus_griseus_crigri
ENSUMAG00000003579	RBFOX1	95	63.784	ENSCSEG00000008840	rbfox1	100	64.595	Cynoglossus_semilaevis
ENSUMAG00000003579	RBFOX1	100	72.118	ENSDARG00000014746	rbfox1	100	87.317	Danio_rerio
ENSUMAG00000003579	RBFOX1	97	85.117	ENSDNOG00000043612	RBFOX1	92	85.117	Dasypus_novemcinctus
ENSUMAG00000003579	RBFOX1	100	80.856	ENSDORG00000010024	Rbfox1	96	82.902	Dipodomys_ordii
ENSUMAG00000003579	RBFOX1	83	96.552	ENSETEG00000003771	RBFOX1	71	96.552	Echinops_telfairi
ENSUMAG00000003579	RBFOX1	99	86.076	ENSEASG00005011599	RBFOX1	100	86.076	Equus_asinus_asinus
ENSUMAG00000003579	RBFOX1	99	85.823	ENSECAG00000012667	RBFOX1	100	85.823	Equus_caballus
ENSUMAG00000003579	RBFOX1	78	71.154	ENSELUG00000013096	rbfox1	94	70.130	Esox_lucius
ENSUMAG00000003579	RBFOX1	99	86.076	ENSFCAG00000025322	RBFOX1	97	85.246	Felis_catus
ENSUMAG00000003579	RBFOX1	80	79.257	ENSFALG00000004027	RBFOX1	97	79.257	Ficedula_albicollis
ENSUMAG00000003579	RBFOX1	100	83.627	ENSFDAG00000007388	RBFOX1	100	83.627	Fukomys_damarensis
ENSUMAG00000003579	RBFOX1	97	81.462	ENSGALG00000034325	RBFOX1	100	80.739	Gallus_gallus
ENSUMAG00000003579	RBFOX1	99	80.000	ENSGAGG00000023681	RBFOX1	100	81.432	Gopherus_agassizii
ENSUMAG00000003579	RBFOX1	100	87.599	ENSGGOG00000016871	-	100	87.335	Gorilla_gorilla
ENSUMAG00000003579	RBFOX1	99	84.772	ENSHGLG00000016944	RBFOX1	100	84.772	Heterocephalus_glaber_female
ENSUMAG00000003579	RBFOX1	99	84.772	ENSHGLG00100003272	RBFOX1	100	84.772	Heterocephalus_glaber_male
ENSUMAG00000003579	RBFOX1	84	66.772	ENSHCOG00000016419	rbfox1	91	66.772	Hippocampus_comes
ENSUMAG00000003579	RBFOX1	97	74.860	ENSIPUG00000015215	rbfox1	100	74.444	Ictalurus_punctatus
ENSUMAG00000003579	RBFOX1	100	85.025	ENSSTOG00000000322	RBFOX1	100	85.025	Ictidomys_tridecemlineatus
ENSUMAG00000003579	RBFOX1	100	80.101	ENSJJAG00000002575	Rbfox1	100	80.101	Jaculus_jaculus
ENSUMAG00000003579	RBFOX1	99	68.074	ENSLBEG00000014659	rbfox1	98	68.074	Labrus_bergylta
ENSUMAG00000003579	RBFOX1	97	73.766	ENSLOCG00000006675	rbfox1	97	74.545	Lepisosteus_oculatus
ENSUMAG00000003579	RBFOX1	76	82.143	ENSLAFG00000011480	RBFOX1	100	82.143	Loxodonta_africana
ENSUMAG00000003579	RBFOX1	100	87.798	ENSMFAG00000036447	RBFOX1	97	87.533	Macaca_fascicularis
ENSUMAG00000003579	RBFOX1	97	85.379	ENSMMUG00000003458	RBFOX1	99	85.014	Macaca_mulatta
ENSUMAG00000003579	RBFOX1	99	85.533	ENSMNEG00000032034	RBFOX1	92	85.156	Macaca_nemestrina
ENSUMAG00000003579	RBFOX1	97	85.417	ENSMLEG00000015382	RBFOX1	95	82.514	Mandrillus_leucophaeus
ENSUMAG00000003579	RBFOX1	95	67.671	ENSMAMG00000003142	rbfox1	100	68.108	Mastacembelus_armatus
ENSUMAG00000003579	RBFOX1	67	89.300	ENSMGAG00000008606	RBFOX1	84	89.300	Meleagris_gallopavo
ENSUMAG00000003579	RBFOX1	97	60.286	ENSMAUG00000020570	Rbfox1	96	60.000	Mesocricetus_auratus
ENSUMAG00000003579	RBFOX1	99	85.063	ENSMICG00000034286	RBFOX1	100	85.063	Microcebus_murinus
ENSUMAG00000003579	RBFOX1	100	82.620	ENSMOCG00000020932	Rbfox1	99	84.595	Microtus_ochrogaster
ENSUMAG00000003579	RBFOX1	84	67.302	ENSMMOG00000009716	rbfox1	86	69.707	Mola_mola
ENSUMAG00000003579	RBFOX1	89	83.051	ENSMODG00000005826	RBFOX1	100	83.051	Monodelphis_domestica
ENSUMAG00000003579	RBFOX1	100	66.753	ENSMALG00000003337	rbfox1	100	66.582	Monopterus_albus
ENSUMAG00000003579	RBFOX1	100	82.872	MGP_CAROLIEiJ_G0020427	Rbfox1	100	82.872	Mus_caroli
ENSUMAG00000003579	RBFOX1	100	82.620	ENSMUSG00000008658	Rbfox1	100	82.620	Mus_musculus
ENSUMAG00000003579	RBFOX1	100	82.872	MGP_PahariEiJ_G0016135	Rbfox1	100	82.872	Mus_pahari
ENSUMAG00000003579	RBFOX1	100	82.368	MGP_SPRETEiJ_G0021321	Rbfox1	100	82.368	Mus_spretus
ENSUMAG00000003579	RBFOX1	99	86.041	ENSMPUG00000014822	RBFOX1	100	86.041	Mustela_putorius_furo
ENSUMAG00000003579	RBFOX1	76	82.736	ENSMLUG00000015896	RBFOX1	100	82.736	Myotis_lucifugus
ENSUMAG00000003579	RBFOX1	100	83.333	ENSNGAG00000023276	Rbfox1	99	85.379	Nannospalax_galili
ENSUMAG00000003579	RBFOX1	99	55.583	ENSNBRG00000011084	rbfox1	94	55.583	Neolamprologus_brichardi
ENSUMAG00000003579	RBFOX1	97	85.156	ENSNLEG00000010017	-	95	82.240	Nomascus_leucogenys
ENSUMAG00000003579	RBFOX1	87	96.923	ENSMEUG00000012525	RBFOX1	74	96.923	Notamacropus_eugenii
ENSUMAG00000003579	RBFOX1	97	76.562	ENSOPRG00000006199	-	92	76.562	Ochotona_princeps
ENSUMAG00000003579	RBFOX1	100	82.368	ENSODEG00000013166	RBFOX1	100	82.368	Octodon_degus
ENSUMAG00000003579	RBFOX1	92	82.787	ENSOANG00000002379	RBFOX1	97	82.787	Ornithorhynchus_anatinus
ENSUMAG00000003579	RBFOX1	61	96.789	ENSOCUG00000001205	-	97	96.789	Oryctolagus_cuniculus
ENSUMAG00000003579	RBFOX1	97	85.379	ENSOGAG00000025535	RBFOX1	96	85.379	Otolemur_garnettii
ENSUMAG00000003579	RBFOX1	70	85.657	ENSOARG00000005135	RBFOX1	100	85.657	Ovis_aries
ENSUMAG00000003579	RBFOX1	100	87.599	ENSPPAG00000036238	-	100	87.335	Pan_paniscus
ENSUMAG00000003579	RBFOX1	97	85.938	ENSPPRG00000006546	RBFOX1	95	83.060	Panthera_pardus
ENSUMAG00000003579	RBFOX1	100	91.689	ENSPTIG00000021154	RBFOX1	100	91.689	Panthera_tigris_altaica
ENSUMAG00000003579	RBFOX1	100	87.599	ENSPTRG00000007744	RBFOX1	100	87.335	Pan_troglodytes
ENSUMAG00000003579	RBFOX1	97	85.417	ENSPANG00000026500	RBFOX1	98	88.636	Papio_anubis
ENSUMAG00000003579	RBFOX1	62	90.541	ENSPKIG00000019353	rbfox1	71	90.826	Paramormyrops_kingsleyae
ENSUMAG00000003579	RBFOX1	97	75.138	ENSPKIG00000009667	-	99	73.011	Paramormyrops_kingsleyae
ENSUMAG00000003579	RBFOX1	100	80.203	ENSPSIG00000006523	RBFOX1	98	80.203	Pelodiscus_sinensis
ENSUMAG00000003579	RBFOX1	100	82.872	ENSPEMG00000017607	Rbfox1	100	82.872	Peromyscus_maniculatus_bairdii
ENSUMAG00000003579	RBFOX1	71	80.282	ENSPCIG00000026887	RBFOX1	100	81.690	Phascolarctos_cinereus
ENSUMAG00000003579	RBFOX1	99	85.787	ENSPPYG00000007079	-	100	85.787	Pongo_abelii
ENSUMAG00000003579	RBFOX1	76	86.397	ENSPCAG00000002630	RBFOX1	95	73.333	Procavia_capensis
ENSUMAG00000003579	RBFOX1	97	84.896	ENSPCOG00000025687	RBFOX1	97	88.184	Propithecus_coquereli
ENSUMAG00000003579	RBFOX1	86	97.101	ENSPVAG00000013467	RBFOX1	92	80.729	Pteropus_vampyrus
ENSUMAG00000003579	RBFOX1	95	72.727	ENSPNAG00000023109	rbfox1	100	72.296	Pygocentrus_nattereri
ENSUMAG00000003579	RBFOX1	97	84.595	ENSRNOG00000002827	Rbfox1	97	83.379	Rattus_norvegicus
ENSUMAG00000003579	RBFOX1	97	85.640	ENSRBIG00000044478	RBFOX1	99	85.640	Rhinopithecus_bieti
ENSUMAG00000003579	RBFOX1	99	85.570	ENSRROG00000044411	RBFOX1	100	85.570	Rhinopithecus_roxellana
ENSUMAG00000003579	RBFOX1	100	87.335	ENSSBOG00000033726	RBFOX1	100	87.071	Saimiri_boliviensis_boliviensis
ENSUMAG00000003579	RBFOX1	99	78.880	ENSSHAG00000009257	RBFOX1	100	82.012	Sarcophilus_harrisii
ENSUMAG00000003579	RBFOX1	97	80.857	ENSSFOG00015023675	rbfox1	95	80.857	Scleropages_formosus
ENSUMAG00000003579	RBFOX1	88	63.501	ENSSFOG00015009955	-	84	65.766	Scleropages_formosus
ENSUMAG00000003579	RBFOX1	100	66.753	ENSSMAG00000015505	rbfox1	93	67.526	Scophthalmus_maximus
ENSUMAG00000003579	RBFOX1	100	68.984	ENSSDUG00000016413	rbfox1	100	71.038	Seriola_dumerili
ENSUMAG00000003579	RBFOX1	84	67.722	ENSSLDG00000009353	rbfox1	88	70.130	Seriola_lalandi_dorsalis
ENSUMAG00000003579	RBFOX1	84	79.032	ENSSPUG00000009732	RBFOX1	87	78.526	Sphenodon_punctatus
ENSUMAG00000003579	RBFOX1	99	69.189	ENSSPAG00000009723	rbfox1	99	72.022	Stegastes_partitus
ENSUMAG00000003579	RBFOX1	99	85.570	ENSSSCG00000007917	RBFOX1	100	84.181	Sus_scrofa
ENSUMAG00000003579	RBFOX1	97	81.675	ENSTGUG00000004562	RBFOX1	99	80.977	Taeniopygia_guttata
ENSUMAG00000003579	RBFOX1	98	68.000	ENSTRUG00000020940	rbfox1	98	68.158	Takifugu_rubripes
ENSUMAG00000003579	RBFOX1	65	50.350	ENSTNIG00000002567	rbfox1	100	51.049	Tetraodon_nigroviridis
ENSUMAG00000003579	RBFOX1	65	89.655	ENSTBEG00000009169	-	65	89.655	Tupaia_belangeri
ENSUMAG00000003579	RBFOX1	97	84.896	ENSTTRG00000005700	RBFOX1	92	84.896	Tursiops_truncatus
ENSUMAG00000003579	RBFOX1	100	91.005	ENSUAMG00000024633	RBFOX1	100	90.741	Ursus_americanus
ENSUMAG00000003579	RBFOX1	76	82.143	ENSVPAG00000001284	RBFOX1	66	100.000	Vicugna_pacos
ENSUMAG00000003579	RBFOX1	97	86.162	ENSVVUG00000017311	RBFOX1	100	87.080	Vulpes_vulpes