EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000003953 (Gene tree)
Gene ID: 103677230
Gene Symbol: ZSCAN22
Alias: -
Full Name: zinc finger and SCAN domain containing 22
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 7534 bases
Position: chrKK498731.1:232147-239680
Accession: 103677230
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000004942	zf-C2H2	PF00096.26	6.1e-52	1	8
ENSUMAP00000004942	zf-C2H2	PF00096.26	6.1e-52	2	8
ENSUMAP00000004942	zf-C2H2	PF00096.26	6.1e-52	3	8
ENSUMAP00000004942	zf-C2H2	PF00096.26	6.1e-52	4	8
ENSUMAP00000004942	zf-C2H2	PF00096.26	6.1e-52	5	8
ENSUMAP00000004942	zf-C2H2	PF00096.26	6.1e-52	6	8
ENSUMAP00000004942	zf-C2H2	PF00096.26	6.1e-52	7	8
ENSUMAP00000004942	zf-C2H2	PF00096.26	6.1e-52	8	8
ENSUMAP00000004942	zf-met	PF12874.7	7.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000005979	ZSCAN22-201	2016	-	ENSUMAP00000004942	491 (aa)	XP_008704693	UPI0004DFEC50

Gene Model

Click here to download ENSUMAG00000003953's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000003953's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000003953	ZSCAN22	50	40.000	ENSUMAG00000024271	ZFP64	71	40.299
ENSUMAG00000003953	ZSCAN22	50	53.744	ENSUMAG00000004054	-	95	53.744
ENSUMAG00000003953	ZSCAN22	53	51.982	ENSUMAG00000007577	-	99	51.982
ENSUMAG00000003953	ZSCAN22	60	58.407	ENSUMAG00000023065	ZNF233	79	58.407

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000003953	ZSCAN22	100	91.446	ENSFCAG00000021958	ZSCAN22	100	91.446	Felis_catus
ENSUMAG00000003953	ZSCAN22	99	71.138	ENSOPRG00000007399	ZSCAN22	100	71.138	Ochotona_princeps
ENSUMAG00000003953	ZSCAN22	100	78.049	ENSOCUG00000022361	ZSCAN22	90	78.049	Oryctolagus_cuniculus
ENSUMAG00000003953	ZSCAN22	100	90.631	ENSPPRG00000003132	ZSCAN22	100	90.631	Panthera_pardus
ENSUMAG00000003953	ZSCAN22	100	90.835	ENSPTIG00000019806	ZSCAN22	100	90.835	Panthera_tigris_altaica
ENSUMAG00000003953	ZSCAN22	68	100.000	ENSUAMG00000004882	-	99	100.000	Ursus_americanus
ENSUMAG00000003953	ZSCAN22	100	99.796	ENSUAMG00000019481	-	100	99.796	Ursus_americanus