EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000004002 (Gene tree)
Gene ID: 103661134
Gene Symbol: SBNO1
Alias: -
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 39973 bases
Position: chrKK498575.1:4930019-4969991
Accession: 103661134
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000005019	ResIII	PF04851.15	9.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000006070	SBNO1-201	4235	-	ENSUMAP00000005019	1393 (aa)	XP_008687029	UPI0004DFE01F

Gene Model

Click here to download ENSUMAG00000004002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000004002's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000004002	SBNO1	100	98.277	ENSG00000139697	SBNO1	100	98.277	Homo_sapiens
ENSUMAG00000004002	SBNO1	82	80.825	ENSAPOG00000003196	sbno1	98	81.083	Acanthochromis_polyacanthus
ENSUMAG00000004002	SBNO1	100	99.355	ENSAMEG00000015151	SBNO1	100	99.355	Ailuropoda_melanoleuca
ENSUMAG00000004002	SBNO1	99	74.666	ENSACIG00000008088	sbno1	99	74.402	Amphilophus_citrinellus
ENSUMAG00000004002	SBNO1	99	75.228	ENSAOCG00000014859	sbno1	99	75.421	Amphiprion_ocellaris
ENSUMAG00000004002	SBNO1	99	75.228	ENSAPEG00000006069	sbno1	99	75.421	Amphiprion_percula
ENSUMAG00000004002	SBNO1	99	75.980	ENSATEG00000006667	sbno1	99	76.261	Anabas_testudineus
ENSUMAG00000004002	SBNO1	100	92.103	ENSAPLG00000015674	SBNO1	100	92.109	Anas_platyrhynchos
ENSUMAG00000004002	SBNO1	100	87.500	ENSACAG00000015441	SBNO1	88	87.500	Anolis_carolinensis
ENSUMAG00000004002	SBNO1	100	98.062	ENSANAG00000029958	-	100	98.062	Aotus_nancymaae
ENSUMAG00000004002	SBNO1	99	73.729	ENSACLG00000024913	sbno1	99	74.465	Astatotilapia_calliptera
ENSUMAG00000004002	SBNO1	99	79.445	ENSAMXG00000019473	sbno1	99	80.156	Astyanax_mexicanus
ENSUMAG00000004002	SBNO1	99	98.707	ENSBTAG00000020505	SBNO1	99	98.707	Bos_taurus
ENSUMAG00000004002	SBNO1	100	98.205	ENSCJAG00000016599	SBNO1	100	98.205	Callithrix_jacchus
ENSUMAG00000004002	SBNO1	100	99.211	ENSCAFG00000007503	SBNO1	100	99.211	Canis_familiaris
ENSUMAG00000004002	SBNO1	100	98.492	ENSCAFG00020015363	SBNO1	100	98.492	Canis_lupus_dingo
ENSUMAG00000004002	SBNO1	99	98.491	ENSCHIG00000008382	SBNO1	99	98.491	Capra_hircus
ENSUMAG00000004002	SBNO1	100	98.636	ENSTSYG00000012749	SBNO1	100	98.636	Carlito_syrichta
ENSUMAG00000004002	SBNO1	96	98.122	ENSCAPG00000000384	SBNO1	100	98.122	Cavia_aperea
ENSUMAG00000004002	SBNO1	100	97.487	ENSCPOG00000008109	SBNO1	100	98.221	Cavia_porcellus
ENSUMAG00000004002	SBNO1	100	93.831	ENSCCAG00000035316	SBNO1	100	93.831	Cebus_capucinus
ENSUMAG00000004002	SBNO1	97	98.444	ENSCATG00000008239	SBNO1	98	99.458	Cercocebus_atys
ENSUMAG00000004002	SBNO1	100	97.631	ENSCLAG00000008995	SBNO1	99	99.277	Chinchilla_lanigera
ENSUMAG00000004002	SBNO1	83	99.050	ENSCSAG00000002064	SBNO1	100	99.050	Chlorocebus_sabaeus
ENSUMAG00000004002	SBNO1	96	94.712	ENSCHOG00000008814	SBNO1	96	94.712	Choloepus_hoffmanni
ENSUMAG00000004002	SBNO1	100	92.324	ENSCPBG00000025968	SBNO1	99	92.109	Chrysemys_picta_bellii
ENSUMAG00000004002	SBNO1	100	93.047	ENSCANG00000042688	-	100	93.047	Colobus_angolensis_palliatus
ENSUMAG00000004002	SBNO1	100	97.631	ENSCGRG00001017470	Sbno1	100	97.631	Cricetulus_griseus_chok1gshd
ENSUMAG00000004002	SBNO1	100	97.631	ENSCGRG00000004756	Sbno1	100	97.631	Cricetulus_griseus_crigri
ENSUMAG00000004002	SBNO1	99	74.596	ENSCSEG00000011919	sbno1	99	75.579	Cynoglossus_semilaevis
ENSUMAG00000004002	SBNO1	99	75.755	ENSCVAG00000007038	sbno1	99	76.154	Cyprinodon_variegatus
ENSUMAG00000004002	SBNO1	99	79.372	ENSDARG00000099080	sbno1	99	79.800	Danio_rerio
ENSUMAG00000004002	SBNO1	100	97.531	ENSDNOG00000017147	SBNO1	99	97.363	Dasypus_novemcinctus
ENSUMAG00000004002	SBNO1	100	83.834	ENSDORG00000015261	Sbno1	100	83.834	Dipodomys_ordii
ENSUMAG00000004002	SBNO1	93	90.596	ENSETEG00000005620	SBNO1	93	90.596	Echinops_telfairi
ENSUMAG00000004002	SBNO1	75	62.674	ENSEBUG00000013823	sbno1	93	62.535	Eptatretus_burgeri
ENSUMAG00000004002	SBNO1	51	94.640	ENSEASG00005012595	-	92	94.640	Equus_asinus_asinus
ENSUMAG00000004002	SBNO1	100	98.923	ENSECAG00000006127	SBNO1	100	98.923	Equus_caballus
ENSUMAG00000004002	SBNO1	83	99.451	ENSEEUG00000003793	SBNO1	83	99.451	Erinaceus_europaeus
ENSUMAG00000004002	SBNO1	99	77.989	ENSELUG00000002886	sbno1	99	78.059	Esox_lucius
ENSUMAG00000004002	SBNO1	99	99.641	ENSFCAG00000015331	SBNO1	99	99.641	Felis_catus
ENSUMAG00000004002	SBNO1	100	92.103	ENSFALG00000009273	SBNO1	100	92.181	Ficedula_albicollis
ENSUMAG00000004002	SBNO1	99	96.049	ENSFDAG00000014232	SBNO1	99	96.049	Fukomys_damarensis
ENSUMAG00000004002	SBNO1	99	75.847	ENSFHEG00000007360	sbno1	99	76.070	Fundulus_heteroclitus
ENSUMAG00000004002	SBNO1	94	78.234	ENSGMOG00000018229	sbno1	99	78.891	Gadus_morhua
ENSUMAG00000004002	SBNO1	88	92.532	ENSGALG00000003392	SBNO1	99	92.289	Gallus_gallus
ENSUMAG00000004002	SBNO1	99	75.899	ENSGAFG00000003960	sbno1	99	76.050	Gambusia_affinis
ENSUMAG00000004002	SBNO1	94	79.252	ENSGACG00000015633	sbno1	99	79.024	Gasterosteus_aculeatus
ENSUMAG00000004002	SBNO1	100	91.463	ENSGAGG00000001065	SBNO1	99	95.118	Gopherus_agassizii
ENSUMAG00000004002	SBNO1	100	98.134	ENSGGOG00000015000	SBNO1	100	98.134	Gorilla_gorilla
ENSUMAG00000004002	SBNO1	99	67.997	ENSHBUG00000011910	sbno1	99	68.821	Haplochromis_burtoni
ENSUMAG00000004002	SBNO1	100	97.775	ENSHGLG00000014165	-	99	99.277	Heterocephalus_glaber_female
ENSUMAG00000004002	SBNO1	91	84.676	ENSHCOG00000003246	sbno1	95	84.980	Hippocampus_comes
ENSUMAG00000004002	SBNO1	99	78.835	ENSIPUG00000015830	Sbno1	98	78.906	Ictalurus_punctatus
ENSUMAG00000004002	SBNO1	100	98.708	ENSSTOG00000023221	SBNO1	100	98.708	Ictidomys_tridecemlineatus
ENSUMAG00000004002	SBNO1	100	98.277	ENSJJAG00000001741	Sbno1	100	98.277	Jaculus_jaculus
ENSUMAG00000004002	SBNO1	99	75.723	ENSKMAG00000009696	sbno1	99	75.913	Kryptolebias_marmoratus
ENSUMAG00000004002	SBNO1	99	75.891	ENSLBEG00000007623	sbno1	99	76.240	Labrus_bergylta
ENSUMAG00000004002	SBNO1	99	81.429	ENSLACG00000017227	SBNO1	99	83.563	Latimeria_chalumnae
ENSUMAG00000004002	SBNO1	99	81.534	ENSLOCG00000005725	sbno1	97	81.805	Lepisosteus_oculatus
ENSUMAG00000004002	SBNO1	100	97.272	ENSLAFG00000002135	SBNO1	100	97.272	Loxodonta_africana
ENSUMAG00000004002	SBNO1	100	98.277	ENSMFAG00000031429	SBNO1	100	98.277	Macaca_fascicularis
ENSUMAG00000004002	SBNO1	100	98.277	ENSMMUG00000011496	SBNO1	100	98.277	Macaca_mulatta
ENSUMAG00000004002	SBNO1	100	96.554	ENSMLEG00000033260	SBNO1	99	99.458	Mandrillus_leucophaeus
ENSUMAG00000004002	SBNO1	99	75.899	ENSMAMG00000005473	sbno1	99	76.039	Mastacembelus_armatus
ENSUMAG00000004002	SBNO1	100	92.032	ENSMGAG00000003274	SBNO1	100	92.109	Meleagris_gallopavo
ENSUMAG00000004002	SBNO1	50	93.562	ENSMAUG00000004834	-	100	93.562	Mesocricetus_auratus
ENSUMAG00000004002	SBNO1	100	97.416	ENSMICG00000006573	-	100	97.416	Microcebus_murinus
ENSUMAG00000004002	SBNO1	100	93.907	ENSMOCG00000009390	Sbno1	100	97.331	Microtus_ochrogaster
ENSUMAG00000004002	SBNO1	99	71.701	ENSMMOG00000008691	sbno1	99	71.992	Mola_mola
ENSUMAG00000004002	SBNO1	99	95.115	ENSMODG00000012470	SBNO1	98	95.115	Monodelphis_domestica
ENSUMAG00000004002	SBNO1	99	75.315	ENSMALG00000001056	sbno1	99	75.542	Monopterus_albus
ENSUMAG00000004002	SBNO1	99	97.486	MGP_CAROLIEiJ_G0027749	Sbno1	100	96.696	Mus_caroli
ENSUMAG00000004002	SBNO1	99	97.845	ENSMUSG00000038095	Sbno1	100	97.459	Mus_musculus
ENSUMAG00000004002	SBNO1	99	97.845	MGP_PahariEiJ_G0024329	Sbno1	100	97.586	Mus_pahari
ENSUMAG00000004002	SBNO1	99	97.629	MGP_SPRETEiJ_G0028747	Sbno1	100	97.078	Mus_spretus
ENSUMAG00000004002	SBNO1	100	99.426	ENSMPUG00000001658	SBNO1	100	99.426	Mustela_putorius_furo
ENSUMAG00000004002	SBNO1	100	98.277	ENSMLUG00000017159	SBNO1	100	98.277	Myotis_lucifugus
ENSUMAG00000004002	SBNO1	100	98.564	ENSNGAG00000012620	Sbno1	100	98.564	Nannospalax_galili
ENSUMAG00000004002	SBNO1	99	73.748	ENSNBRG00000019189	sbno1	99	74.483	Neolamprologus_brichardi
ENSUMAG00000004002	SBNO1	100	94.472	ENSNLEG00000001502	SBNO1	100	94.472	Nomascus_leucogenys
ENSUMAG00000004002	SBNO1	62	84.177	ENSMEUG00000008768	-	93	88.608	Notamacropus_eugenii
ENSUMAG00000004002	SBNO1	100	94.695	ENSOPRG00000011054	SBNO1	100	94.624	Ochotona_princeps
ENSUMAG00000004002	SBNO1	100	97.487	ENSODEG00000009997	SBNO1	100	97.487	Octodon_degus
ENSUMAG00000004002	SBNO1	99	75.581	ENSONIG00000015348	sbno1	99	75.806	Oreochromis_niloticus
ENSUMAG00000004002	SBNO1	98	96.499	ENSOCUG00000002441	SBNO1	95	96.499	Oryctolagus_cuniculus
ENSUMAG00000004002	SBNO1	99	75.105	ENSORLG00000001593	sbno1	99	75.436	Oryzias_latipes
ENSUMAG00000004002	SBNO1	99	75.316	ENSORLG00020015216	sbno1	99	75.527	Oryzias_latipes_hni
ENSUMAG00000004002	SBNO1	99	75.229	ENSORLG00015002726	sbno1	99	75.440	Oryzias_latipes_hsok
ENSUMAG00000004002	SBNO1	99	75.264	ENSOMEG00000019313	sbno1	99	75.545	Oryzias_melastigma
ENSUMAG00000004002	SBNO1	50	90.415	ENSOGAG00000010781	-	100	90.844	Otolemur_garnettii
ENSUMAG00000004002	SBNO1	99	98.278	ENSOARG00000004404	SBNO1	99	98.278	Ovis_aries
ENSUMAG00000004002	SBNO1	100	98.277	ENSPPAG00000024635	SBNO1	100	98.277	Pan_paniscus
ENSUMAG00000004002	SBNO1	99	99.641	ENSPPRG00000022092	SBNO1	99	99.641	Panthera_pardus
ENSUMAG00000004002	SBNO1	100	99.354	ENSPTIG00000017803	SBNO1	100	99.354	Panthera_tigris_altaica
ENSUMAG00000004002	SBNO1	100	98.349	ENSPTRG00000005597	SBNO1	100	98.349	Pan_troglodytes
ENSUMAG00000004002	SBNO1	100	98.277	ENSPANG00000011640	SBNO1	99	99.458	Papio_anubis
ENSUMAG00000004002	SBNO1	99	80.486	ENSPKIG00000001441	sbno1	99	80.569	Paramormyrops_kingsleyae
ENSUMAG00000004002	SBNO1	92	87.956	ENSPSIG00000009256	-	100	87.956	Pelodiscus_sinensis
ENSUMAG00000004002	SBNO1	100	91.506	ENSPSIG00000009572	-	100	91.422	Pelodiscus_sinensis
ENSUMAG00000004002	SBNO1	100	97.344	ENSPEMG00000016087	Sbno1	100	97.344	Peromyscus_maniculatus_bairdii
ENSUMAG00000004002	SBNO1	99	94.329	ENSPCIG00000010985	SBNO1	99	94.544	Phascolarctos_cinereus
ENSUMAG00000004002	SBNO1	99	76.127	ENSPFOG00000005069	sbno1	99	76.277	Poecilia_formosa
ENSUMAG00000004002	SBNO1	99	75.986	ENSPLAG00000015015	sbno1	99	76.314	Poecilia_latipinna
ENSUMAG00000004002	SBNO1	99	76.073	ENSPMEG00000021212	sbno1	99	76.224	Poecilia_mexicana
ENSUMAG00000004002	SBNO1	99	75.721	ENSPREG00000017746	sbno1	99	75.753	Poecilia_reticulata
ENSUMAG00000004002	SBNO1	100	97.846	ENSPPYG00000005084	SBNO1	100	97.846	Pongo_abelii
ENSUMAG00000004002	SBNO1	89	92.740	ENSPCAG00000008634	SBNO1	88	92.710	Procavia_capensis
ENSUMAG00000004002	SBNO1	100	98.492	ENSPCOG00000024277	SBNO1	100	98.492	Propithecus_coquereli
ENSUMAG00000004002	SBNO1	87	99.405	ENSPVAG00000015304	SBNO1	87	99.405	Pteropus_vampyrus
ENSUMAG00000004002	SBNO1	99	75.899	ENSPNYG00000004291	sbno1	99	75.913	Pundamilia_nyererei
ENSUMAG00000004002	SBNO1	99	79.347	ENSPNAG00000015622	sbno1	99	79.205	Pygocentrus_nattereri
ENSUMAG00000004002	SBNO1	99	97.557	ENSRNOG00000001064	Sbno1	99	98.039	Rattus_norvegicus
ENSUMAG00000004002	SBNO1	100	98.421	ENSRROG00000034230	SBNO1	99	99.458	Rhinopithecus_roxellana
ENSUMAG00000004002	SBNO1	96	93.006	ENSSBOG00000015422	SBNO1	100	93.006	Saimiri_boliviensis_boliviensis
ENSUMAG00000004002	SBNO1	99	80.143	ENSSFOG00015019025	sbno1	99	80.214	Scleropages_formosus
ENSUMAG00000004002	SBNO1	99	76.180	ENSSMAG00000013640	sbno1	99	76.392	Scophthalmus_maximus
ENSUMAG00000004002	SBNO1	99	75.683	ENSSDUG00000023480	sbno1	99	75.823	Seriola_dumerili
ENSUMAG00000004002	SBNO1	99	75.613	ENSSLDG00000007928	sbno1	99	75.753	Seriola_lalandi_dorsalis
ENSUMAG00000004002	SBNO1	89	98.867	ENSSARG00000002594	SBNO1	89	98.867	Sorex_araneus
ENSUMAG00000004002	SBNO1	100	89.160	ENSSPUG00000012640	SBNO1	100	89.311	Sphenodon_punctatus
ENSUMAG00000004002	SBNO1	99	75.087	ENSSPAG00000016244	sbno1	99	75.297	Stegastes_partitus
ENSUMAG00000004002	SBNO1	100	98.708	ENSSSCG00000009776	SBNO1	100	98.708	Sus_scrofa
ENSUMAG00000004002	SBNO1	100	92.032	ENSTGUG00000005380	SBNO1	100	92.109	Taeniopygia_guttata
ENSUMAG00000004002	SBNO1	99	75.510	ENSTRUG00000018490	sbno1	99	75.683	Takifugu_rubripes
ENSUMAG00000004002	SBNO1	56	70.654	ENSTNIG00000013506	sbno1	99	70.756	Tetraodon_nigroviridis
ENSUMAG00000004002	SBNO1	100	100.000	ENSUAMG00000019671	SBNO1	100	100.000	Ursus_americanus
ENSUMAG00000004002	SBNO1	95	97.826	ENSVPAG00000007024	SBNO1	95	97.826	Vicugna_pacos
ENSUMAG00000004002	SBNO1	100	99.426	ENSVVUG00000027807	SBNO1	100	99.426	Vulpes_vulpes
ENSUMAG00000004002	SBNO1	99	82.479	ENSXETG00000031930	SBNO1	99	82.194	Xenopus_tropicalis
ENSUMAG00000004002	SBNO1	89	74.422	ENSXCOG00000011607	sbno1	95	75.180	Xiphophorus_couchianus
ENSUMAG00000004002	SBNO1	99	75.882	ENSXMAG00000002140	sbno1	99	76.120	Xiphophorus_maculatus