EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000004043 (Gene tree)
Gene ID: 103673905
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 140174 bases
Position: chrKK498677.1:8401689-8541862
Accession: 25701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000006778	ResIII	PF04851.15	5.9e-07	1	1
ENSUMAP00000006712	ResIII	PF04851.15	7.5e-07	1	1
ENSUMAP00000006658	ResIII	PF04851.15	7.6e-07	1	1
ENSUMAP00000006731	ResIII	PF04851.15	7.8e-07	1	1
ENSUMAP00000005947	ResIII	PF04851.15	1.1e-06	1	1
ENSUMAP00000006831	ResIII	PF04851.15	3.5e-06	1	1
ENSUMAP00000006401	ResIII	PF04851.15	5.6e-06	1	1
ENSUMAP00000005947	BRK	PF07533.16	5e-31	1	2
ENSUMAP00000005947	BRK	PF07533.16	5e-31	2	2
ENSUMAP00000006401	BRK	PF07533.16	1e-30	1	2
ENSUMAP00000006401	BRK	PF07533.16	1e-30	2	2
ENSUMAP00000006712	BRK	PF07533.16	1e-18	1	1
ENSUMAP00000006658	BRK	PF07533.16	1.1e-18	1	1
ENSUMAP00000006731	BRK	PF07533.16	4.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000008130	CHD9-206	5439	-	ENSUMAP00000006778	1812 (aa)	-	-
ENSUMAT00000008076	CHD9-205	5622	-	ENSUMAP00000006731	1873 (aa)	-	-
ENSUMAT00000007997	CHD9-203	5487	-	ENSUMAP00000006658	1828 (aa)	-	-
ENSUMAT00000008205	CHD9-207	5403	-	ENSUMAP00000006831	1800 (aa)	-	-
ENSUMAT00000008056	CHD9-204	5391	-	ENSUMAP00000006712	1796 (aa)	-	-
ENSUMAT00000007165	CHD9-201	5649	-	ENSUMAP00000005947	1882 (aa)	-	-
ENSUMAT00000007700	CHD9-202	7812	-	ENSUMAP00000006401	2603 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000004043's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000004043's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000004043	CHD9	86	74.815	ENSUMAG00000002017	CHD6	96	73.512
ENSUMAG00000004043	CHD9	92	68.900	ENSUMAG00000004045	CHD8	80	78.753
ENSUMAG00000004043	CHD9	86	78.556	ENSUMAG00000010436	CHD7	79	78.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000004043	CHD9	99	98.401	ENSG00000177200	CHD9	100	100.000	Homo_sapiens
ENSUMAG00000004043	CHD9	95	86.520	ENSAPOG00000023034	chd9	78	86.416	Acanthochromis_polyacanthus
ENSUMAG00000004043	CHD9	99	98.827	ENSAMEG00000016232	CHD9	90	96.756	Ailuropoda_melanoleuca
ENSUMAG00000004043	CHD9	95	82.291	ENSACIG00000004097	chd9	65	81.439	Amphilophus_citrinellus
ENSUMAG00000004043	CHD9	94	86.779	ENSAOCG00000005487	chd9	80	86.416	Amphiprion_ocellaris
ENSUMAG00000004043	CHD9	95	87.053	ENSAPEG00000009859	chd9	79	86.416	Amphiprion_percula
ENSUMAG00000004043	CHD9	94	87.223	ENSATEG00000002748	chd9	67	86.856	Anabas_testudineus
ENSUMAG00000004043	CHD9	97	94.776	ENSAPLG00000002826	CHD9	65	94.776	Anas_platyrhynchos
ENSUMAG00000004043	CHD9	98	94.415	ENSACAG00000016150	CHD9	89	79.939	Anolis_carolinensis
ENSUMAG00000004043	CHD9	99	98.294	ENSANAG00000015630	CHD9	90	93.316	Aotus_nancymaae
ENSUMAG00000004043	CHD9	91	86.681	ENSACLG00000016899	chd9	66	85.893	Astatotilapia_calliptera
ENSUMAG00000004043	CHD9	95	86.837	ENSAMXG00000005652	chd9	78	87.049	Astyanax_mexicanus
ENSUMAG00000004043	CHD9	99	98.507	ENSBTAG00000002287	CHD9	90	94.693	Bos_taurus
ENSUMAG00000004043	CHD9	99	97.974	ENSCJAG00000001573	CHD9	90	92.745	Callithrix_jacchus
ENSUMAG00000004043	CHD9	99	100.000	ENSCAFG00000009699	CHD9	90	96.295	Canis_familiaris
ENSUMAG00000004043	CHD9	99	100.000	ENSCAFG00020002879	CHD9	90	96.295	Canis_lupus_dingo
ENSUMAG00000004043	CHD9	99	98.087	ENSCHIG00000021000	CHD9	88	93.862	Capra_hircus
ENSUMAG00000004043	CHD9	99	98.401	ENSTSYG00000007693	CHD9	90	94.270	Carlito_syrichta
ENSUMAG00000004043	CHD9	89	97.143	ENSCAPG00000011604	CHD9	62	96.596	Cavia_aperea
ENSUMAG00000004043	CHD9	99	90.529	ENSCPOG00000036544	CHD9	90	89.157	Cavia_porcellus
ENSUMAG00000004043	CHD9	99	98.081	ENSCCAG00000036178	CHD9	90	92.513	Cebus_capucinus
ENSUMAG00000004043	CHD9	99	98.188	ENSCATG00000036753	CHD9	90	93.392	Cercocebus_atys
ENSUMAG00000004043	CHD9	99	97.868	ENSCLAG00000007137	CHD9	99	96.879	Chinchilla_lanigera
ENSUMAG00000004043	CHD9	98	98.294	ENSCSAG00000005311	CHD9	90	93.433	Chlorocebus_sabaeus
ENSUMAG00000004043	CHD9	74	98.077	ENSCHOG00000003935	CHD9	66	98.077	Choloepus_hoffmanni
ENSUMAG00000004043	CHD9	97	95.802	ENSCPBG00000012459	CHD9	99	82.356	Chrysemys_picta_bellii
ENSUMAG00000004043	CHD9	98	98.188	ENSCANG00000030349	CHD9	90	94.079	Colobus_angolensis_palliatus
ENSUMAG00000004043	CHD9	98	97.228	ENSCGRG00001016150	Chd9	90	90.341	Cricetulus_griseus_chok1gshd
ENSUMAG00000004043	CHD9	98	97.228	ENSCGRG00000012850	Chd9	99	95.838	Cricetulus_griseus_crigri
ENSUMAG00000004043	CHD9	91	84.969	ENSCSEG00000009209	chd9	76	83.054	Cynoglossus_semilaevis
ENSUMAG00000004043	CHD9	91	86.164	ENSCVAG00000016195	chd9	66	86.164	Cyprinodon_variegatus
ENSUMAG00000004043	CHD9	95	86.397	ENSDARG00000074498	chd9	77	86.397	Danio_rerio
ENSUMAG00000004043	CHD9	98	97.655	ENSDNOG00000006045	CHD9	88	97.655	Dasypus_novemcinctus
ENSUMAG00000004043	CHD9	90	97.781	ENSDORG00000008523	-	94	97.781	Dipodomys_ordii
ENSUMAG00000004043	CHD9	87	98.712	ENSETEG00000009565	CHD9	84	92.839	Echinops_telfairi
ENSUMAG00000004043	CHD9	99	99.048	ENSEASG00005014832	CHD9	95	99.048	Equus_asinus_asinus
ENSUMAG00000004043	CHD9	99	98.507	ENSECAG00000011505	CHD9	90	94.845	Equus_caballus
ENSUMAG00000004043	CHD9	83	97.790	ENSEEUG00000014515	CHD9	78	97.790	Erinaceus_europaeus
ENSUMAG00000004043	CHD9	95	86.407	ENSELUG00000006031	chd9	77	86.359	Esox_lucius
ENSUMAG00000004043	CHD9	99	98.827	ENSFCAG00000022534	CHD9	90	95.875	Felis_catus
ENSUMAG00000004043	CHD9	97	95.096	ENSFALG00000013276	CHD9	88	87.097	Ficedula_albicollis
ENSUMAG00000004043	CHD9	99	98.188	ENSFDAG00000021037	CHD9	90	92.440	Fukomys_damarensis
ENSUMAG00000004043	CHD9	95	86.164	ENSFHEG00000006068	chd9	79	74.280	Fundulus_heteroclitus
ENSUMAG00000004043	CHD9	83	83.475	ENSGMOG00000006040	chd9	70	83.316	Gadus_morhua
ENSUMAG00000004043	CHD9	93	94.883	ENSGALG00000039178	CHD9	92	83.982	Gallus_gallus
ENSUMAG00000004043	CHD9	95	85.893	ENSGAFG00000010014	chd9	75	86.102	Gambusia_affinis
ENSUMAG00000004043	CHD9	95	85.535	ENSGACG00000016694	chd9	77	85.535	Gasterosteus_aculeatus
ENSUMAG00000004043	CHD9	98	98.401	ENSGGOG00000014816	CHD9	90	94.005	Gorilla_gorilla
ENSUMAG00000004043	CHD9	93	86.892	ENSHBUG00000023322	chd9	78	85.729	Haplochromis_burtoni
ENSUMAG00000004043	CHD9	99	98.294	ENSHGLG00000014938	CHD9	99	97.225	Heterocephalus_glaber_female
ENSUMAG00000004043	CHD9	95	87.245	ENSHCOG00000000937	chd9	76	86.047	Hippocampus_comes
ENSUMAG00000004043	CHD9	94	87.740	ENSIPUG00000016448	chd9	76	86.569	Ictalurus_punctatus
ENSUMAG00000004043	CHD9	99	98.401	ENSSTOG00000022273	CHD9	99	97.457	Ictidomys_tridecemlineatus
ENSUMAG00000004043	CHD9	90	99.086	ENSJJAG00000015741	-	94	99.086	Jaculus_jaculus
ENSUMAG00000004043	CHD9	93	86.311	ENSKMAG00000016784	chd9	80	73.539	Kryptolebias_marmoratus
ENSUMAG00000004043	CHD9	95	85.266	ENSLBEG00000012077	chd9	75	85.266	Labrus_bergylta
ENSUMAG00000004043	CHD9	98	88.060	ENSLACG00000005557	CHD9	87	76.515	Latimeria_chalumnae
ENSUMAG00000004043	CHD9	96	90.275	ENSLOCG00000007225	chd9	79	90.095	Lepisosteus_oculatus
ENSUMAG00000004043	CHD9	99	98.081	ENSLAFG00000015374	CHD9	90	93.051	Loxodonta_africana
ENSUMAG00000004043	CHD9	98	98.188	ENSMFAG00000041354	CHD9	86	98.188	Macaca_fascicularis
ENSUMAG00000004043	CHD9	98	98.188	ENSMMUG00000016310	CHD9	90	94.041	Macaca_mulatta
ENSUMAG00000004043	CHD9	98	98.188	ENSMNEG00000031494	CHD9	100	93.849	Macaca_nemestrina
ENSUMAG00000004043	CHD9	98	98.188	ENSMLEG00000043219	CHD9	90	94.079	Mandrillus_leucophaeus
ENSUMAG00000004043	CHD9	95	86.421	ENSMAMG00000003909	chd9	67	86.059	Mastacembelus_armatus
ENSUMAG00000004043	CHD9	96	86.102	ENSMZEG00005006581	chd9	78	86.373	Maylandia_zebra
ENSUMAG00000004043	CHD9	97	88.746	ENSMGAG00000004642	CHD9	70	88.462	Meleagris_gallopavo
ENSUMAG00000004043	CHD9	99	98.507	ENSMICG00000016679	CHD9	90	94.194	Microcebus_murinus
ENSUMAG00000004043	CHD9	92	86.164	ENSMMOG00000016406	chd9	67	86.164	Mola_mola
ENSUMAG00000004043	CHD9	95	96.067	ENSMODG00000013142	-	92	96.067	Monodelphis_domestica
ENSUMAG00000004043	CHD9	94	86.575	ENSMALG00000013306	chd9	63	86.211	Monopterus_albus
ENSUMAG00000004043	CHD9	98	97.122	MGP_CAROLIEiJ_G0031364	Chd9	90	89.042	Mus_caroli
ENSUMAG00000004043	CHD9	98	97.015	ENSMUSG00000056608	Chd9	99	95.145	Mus_musculus
ENSUMAG00000004043	CHD9	98	97.122	MGP_PahariEiJ_G0022964	Chd9	90	87.280	Mus_pahari
ENSUMAG00000004043	CHD9	98	97.015	MGP_SPRETEiJ_G0032483	Chd9	90	88.851	Mus_spretus
ENSUMAG00000004043	CHD9	99	100.000	ENSMPUG00000003285	CHD9	90	96.486	Mustela_putorius_furo
ENSUMAG00000004043	CHD9	99	97.868	ENSMLUG00000004456	CHD9	90	92.361	Myotis_lucifugus
ENSUMAG00000004043	CHD9	95	86.102	ENSNBRG00000009423	chd9	78	86.102	Neolamprologus_brichardi
ENSUMAG00000004043	CHD9	99	95.482	ENSNLEG00000001026	CHD9	100	94.156	Nomascus_leucogenys
ENSUMAG00000004043	CHD9	83	96.732	ENSMEUG00000008222	-	84	96.732	Notamacropus_eugenii
ENSUMAG00000004043	CHD9	81	97.714	ENSOPRG00000011168	CHD9	72	97.714	Ochotona_princeps
ENSUMAG00000004043	CHD9	99	97.866	ENSODEG00000004466	CHD9	90	92.328	Octodon_degus
ENSUMAG00000004043	CHD9	95	86.416	ENSONIG00000002816	chd9	78	86.416	Oreochromis_niloticus
ENSUMAG00000004043	CHD9	97	95.309	ENSOANG00000013401	CHD9	90	84.668	Ornithorhynchus_anatinus
ENSUMAG00000004043	CHD9	99	98.614	ENSOCUG00000001016	CHD9	84	98.614	Oryctolagus_cuniculus
ENSUMAG00000004043	CHD9	93	85.998	ENSORLG00000013810	chd9	78	85.430	Oryzias_latipes
ENSUMAG00000004043	CHD9	93	86.450	ENSORLG00020020665	chd9	65	86.450	Oryzias_latipes_hni
ENSUMAG00000004043	CHD9	93	85.998	ENSORLG00015019126	chd9	75	85.998	Oryzias_latipes_hsok
ENSUMAG00000004043	CHD9	71	77.618	ENSOMEG00000015978	chd9	97	62.493	Oryzias_melastigma
ENSUMAG00000004043	CHD9	99	98.081	ENSOGAG00000002110	CHD9	90	92.675	Otolemur_garnettii
ENSUMAG00000004043	CHD9	99	98.507	ENSOARG00000017664	CHD9	90	94.508	Ovis_aries
ENSUMAG00000004043	CHD9	98	98.401	ENSPPAG00000039388	-	86	98.401	Pan_paniscus
ENSUMAG00000004043	CHD9	99	98.827	ENSPPRG00000004801	CHD9	90	95.951	Panthera_pardus
ENSUMAG00000004043	CHD9	99	98.721	ENSPTIG00000021854	CHD9	88	100.000	Panthera_tigris_altaica
ENSUMAG00000004043	CHD9	98	98.401	ENSPTRG00000008113	CHD9	90	94.347	Pan_troglodytes
ENSUMAG00000004043	CHD9	98	98.081	ENSPANG00000019307	CHD9	90	94.003	Papio_anubis
ENSUMAG00000004043	CHD9	94	87.895	ENSPKIG00000021876	chd9	77	87.895	Paramormyrops_kingsleyae
ENSUMAG00000004043	CHD9	95	84.787	ENSPKIG00000025401	-	69	84.339	Paramormyrops_kingsleyae
ENSUMAG00000004043	CHD9	99	84.251	ENSPSIG00000008099	CHD9	97	84.251	Pelodiscus_sinensis
ENSUMAG00000004043	CHD9	70	75.985	ENSPMAG00000006035	-	82	75.985	Petromyzon_marinus
ENSUMAG00000004043	CHD9	99	87.727	ENSPCIG00000017215	CHD9	95	91.919	Phascolarctos_cinereus
ENSUMAG00000004043	CHD9	95	85.893	ENSPFOG00000015839	chd9	85	66.753	Poecilia_formosa
ENSUMAG00000004043	CHD9	95	86.373	ENSPLAG00000011118	chd9	77	86.373	Poecilia_latipinna
ENSUMAG00000004043	CHD9	95	85.983	ENSPMEG00000015106	chd9	85	67.150	Poecilia_mexicana
ENSUMAG00000004043	CHD9	95	86.268	ENSPREG00000006473	chd9	75	85.998	Poecilia_reticulata
ENSUMAG00000004043	CHD9	98	98.401	ENSPPYG00000007348	CHD9	90	94.232	Pongo_abelii
ENSUMAG00000004043	CHD9	91	96.324	ENSPCAG00000007564	CHD9	86	96.324	Procavia_capensis
ENSUMAG00000004043	CHD9	99	93.497	ENSPCOG00000028433	CHD9	85	99.296	Propithecus_coquereli
ENSUMAG00000004043	CHD9	96	94.935	ENSPVAG00000015617	CHD9	87	94.935	Pteropus_vampyrus
ENSUMAG00000004043	CHD9	96	86.102	ENSPNYG00000010947	chd9	78	86.102	Pundamilia_nyererei
ENSUMAG00000004043	CHD9	93	87.076	ENSPNAG00000024141	chd9	78	87.367	Pygocentrus_nattereri
ENSUMAG00000004043	CHD9	94	94.059	ENSRNOG00000049302	Chd9	100	90.032	Rattus_norvegicus
ENSUMAG00000004043	CHD9	99	97.974	ENSRBIG00000035553	CHD9	93	97.558	Rhinopithecus_bieti
ENSUMAG00000004043	CHD9	99	98.081	ENSRROG00000033278	CHD9	86	98.081	Rhinopithecus_roxellana
ENSUMAG00000004043	CHD9	98	98.188	ENSSBOG00000030240	CHD9	90	93.277	Saimiri_boliviensis_boliviensis
ENSUMAG00000004043	CHD9	97	95.842	ENSSHAG00000002719	CHD9	90	86.128	Sarcophilus_harrisii
ENSUMAG00000004043	CHD9	96	86.766	ENSSFOG00015001327	chd9	77	86.397	Scleropages_formosus
ENSUMAG00000004043	CHD9	95	88.055	ENSSFOG00015020209	chd9	78	87.487	Scleropages_formosus
ENSUMAG00000004043	CHD9	92	85.729	ENSSMAG00000008953	chd9	76	85.371	Scophthalmus_maximus
ENSUMAG00000004043	CHD9	96	86.589	ENSSDUG00000006139	chd9	77	86.225	Seriola_dumerili
ENSUMAG00000004043	CHD9	96	85.893	ENSSLDG00000017818	chd9	75	85.595	Seriola_lalandi_dorsalis
ENSUMAG00000004043	CHD9	93	98.701	ENSSARG00000010632	CHD9	68	98.701	Sorex_araneus
ENSUMAG00000004043	CHD9	95	86.359	ENSSPAG00000021649	chd9	78	85.998	Stegastes_partitus
ENSUMAG00000004043	CHD9	99	96.614	ENSSSCG00000033591	CHD9	75	94.452	Sus_scrofa
ENSUMAG00000004043	CHD9	99	85.077	ENSTGUG00000007476	CHD9	100	83.651	Taeniopygia_guttata
ENSUMAG00000004043	CHD9	95	85.474	ENSTRUG00000009125	chd9	67	85.474	Takifugu_rubripes
ENSUMAG00000004043	CHD9	73	81.951	ENSTNIG00000003825	chd9	83	81.951	Tetraodon_nigroviridis
ENSUMAG00000004043	CHD9	73	97.973	ENSTBEG00000016052	-	81	97.748	Tupaia_belangeri
ENSUMAG00000004043	CHD9	99	96.584	ENSTTRG00000012674	CHD9	90	93.965	Tursiops_truncatus
ENSUMAG00000004043	CHD9	80	100.000	ENSUAMG00000022706	CHD9	86	100.000	Ursus_americanus
ENSUMAG00000004043	CHD9	96	96.335	ENSVPAG00000001374	CHD9	87	96.335	Vicugna_pacos
ENSUMAG00000004043	CHD9	99	100.000	ENSVVUG00000019435	CHD9	90	96.333	Vulpes_vulpes
ENSUMAG00000004043	CHD9	97	91.525	ENSXETG00000000349	chd9	96	74.494	Xenopus_tropicalis
ENSUMAG00000004043	CHD9	92	86.373	ENSXCOG00000012997	chd9	75	86.373	Xiphophorus_couchianus
ENSUMAG00000004043	CHD9	95	85.893	ENSXMAG00000016192	chd9	77	86.102	Xiphophorus_maculatus