EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000004054 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 345-like
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 31820 bases
Position: chrKK498731.1:684983-716802
Accession: 103677246
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000005085	zf-C2H2	PF00096.26	9.7e-98	1	15
ENSUMAP00000005085	zf-C2H2	PF00096.26	9.7e-98	2	15
ENSUMAP00000005085	zf-C2H2	PF00096.26	9.7e-98	3	15
ENSUMAP00000005085	zf-C2H2	PF00096.26	9.7e-98	4	15
ENSUMAP00000005085	zf-C2H2	PF00096.26	9.7e-98	5	15
ENSUMAP00000005085	zf-C2H2	PF00096.26	9.7e-98	6	15
ENSUMAP00000005085	zf-C2H2	PF00096.26	9.7e-98	7	15
ENSUMAP00000005085	zf-C2H2	PF00096.26	9.7e-98	8	15
ENSUMAP00000005085	zf-C2H2	PF00096.26	9.7e-98	9	15
ENSUMAP00000005085	zf-C2H2	PF00096.26	9.7e-98	10	15
ENSUMAP00000005085	zf-C2H2	PF00096.26	9.7e-98	11	15
ENSUMAP00000005085	zf-C2H2	PF00096.26	9.7e-98	12	15
ENSUMAP00000005085	zf-C2H2	PF00096.26	9.7e-98	13	15
ENSUMAP00000005085	zf-C2H2	PF00096.26	9.7e-98	14	15
ENSUMAP00000005085	zf-C2H2	PF00096.26	9.7e-98	15	15
ENSUMAP00000005086	zf-C2H2	PF00096.26	9.7e-98	1	15
ENSUMAP00000005086	zf-C2H2	PF00096.26	9.7e-98	2	15
ENSUMAP00000005086	zf-C2H2	PF00096.26	9.7e-98	3	15
ENSUMAP00000005086	zf-C2H2	PF00096.26	9.7e-98	4	15
ENSUMAP00000005086	zf-C2H2	PF00096.26	9.7e-98	5	15
ENSUMAP00000005086	zf-C2H2	PF00096.26	9.7e-98	6	15
ENSUMAP00000005086	zf-C2H2	PF00096.26	9.7e-98	7	15
ENSUMAP00000005086	zf-C2H2	PF00096.26	9.7e-98	8	15
ENSUMAP00000005086	zf-C2H2	PF00096.26	9.7e-98	9	15
ENSUMAP00000005086	zf-C2H2	PF00096.26	9.7e-98	10	15
ENSUMAP00000005086	zf-C2H2	PF00096.26	9.7e-98	11	15
ENSUMAP00000005086	zf-C2H2	PF00096.26	9.7e-98	12	15
ENSUMAP00000005086	zf-C2H2	PF00096.26	9.7e-98	13	15
ENSUMAP00000005086	zf-C2H2	PF00096.26	9.7e-98	14	15
ENSUMAP00000005086	zf-C2H2	PF00096.26	9.7e-98	15	15
ENSUMAP00000005085	zf-met	PF12874.7	2.8e-06	1	1
ENSUMAP00000005086	zf-met	PF12874.7	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000006148	-	3582	-	ENSUMAP00000005085	783 (aa)	XP_008704728	UPI0004DFF3A7
ENSUMAT00000006154	-	3479	-	ENSUMAP00000005086	783 (aa)	XP_008704728	UPI0004DFF3A7

Gene Model

Click here to download ENSUMAG00000004054's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000004054's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000004054	-	95	53.755	ENSUMAG00000013351	ZNF768	64	53.053
ENSUMAG00000004054	-	95	54.088	ENSUMAG00000019336	-	99	54.088
ENSUMAG00000004054	-	97	45.104	ENSUMAG00000007151	-	82	45.104
ENSUMAG00000004054	-	84	40.000	ENSUMAG00000015722	ZNF770	97	31.696
ENSUMAG00000004054	-	78	45.455	ENSUMAG00000011251	-	100	45.455
ENSUMAG00000004054	-	96	39.286	ENSUMAG00000003733	PRDM5	92	35.539
ENSUMAG00000004054	-	94	52.047	ENSUMAG00000023056	-	90	52.047
ENSUMAG00000004054	-	95	52.452	ENSUMAG00000023059	ZNF226	78	52.452
ENSUMAG00000004054	-	95	48.951	ENSUMAG00000017894	-	79	48.951
ENSUMAG00000004054	-	100	45.202	ENSUMAG00000014213	ZNF317	75	45.202
ENSUMAG00000004054	-	94	49.231	ENSUMAG00000017193	ZFP69B	61	49.231
ENSUMAG00000004054	-	94	46.624	ENSUMAG00000014322	ZFP1	83	46.624
ENSUMAG00000004054	-	96	44.195	ENSUMAG00000019496	-	99	44.195
ENSUMAG00000004054	-	78	33.460	ENSUMAG00000016941	GTF3A	90	33.333
ENSUMAG00000004054	-	97	53.386	ENSUMAG00000024602	-	97	53.099
ENSUMAG00000004054	-	75	33.641	ENSUMAG00000004744	-	61	33.641
ENSUMAG00000004054	-	97	48.997	ENSUMAG00000023930	ZNF454	78	48.997
ENSUMAG00000004054	-	99	44.540	ENSUMAG00000007135	-	91	44.540
ENSUMAG00000004054	-	95	40.237	ENSUMAG00000015640	ZNF652	51	40.237
ENSUMAG00000004054	-	63	36.905	ENSUMAG00000004755	-	63	36.905
ENSUMAG00000004054	-	96	50.773	ENSUMAG00000023068	ZNF235	66	50.773
ENSUMAG00000004054	-	96	44.159	ENSUMAG00000023065	ZNF233	83	44.159
ENSUMAG00000004054	-	95	44.144	ENSUMAG00000007577	-	99	45.322
ENSUMAG00000004054	-	67	34.815	ENSUMAG00000006525	SNAI2	54	34.815
ENSUMAG00000004054	-	95	49.206	ENSUMAG00000024767	-	76	49.206
ENSUMAG00000004054	-	100	62.803	ENSUMAG00000004061	-	100	62.803
ENSUMAG00000004054	-	94	52.336	ENSUMAG00000002662	ZNF574	81	55.172
ENSUMAG00000004054	-	100	72.256	ENSUMAG00000004051	-	100	69.667
ENSUMAG00000004054	-	95	53.744	ENSUMAG00000003953	ZSCAN22	50	53.744
ENSUMAG00000004054	-	92	33.673	ENSUMAG00000024271	ZFP64	77	32.482

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000004054	-	96	61.322	ENSBTAG00000038088	-	100	60.423	Bos_taurus
ENSUMAG00000004054	-	100	66.071	ENSCAFG00000029340	-	96	65.645	Canis_familiaris
ENSUMAG00000004054	-	100	66.071	ENSCAFG00020014950	-	100	65.645	Canis_lupus_dingo
ENSUMAG00000004054	-	96	65.500	ENSCAFG00020014929	-	97	65.500	Canis_lupus_dingo
ENSUMAG00000004054	-	100	55.378	ENSCPBG00000017494	-	94	55.378	Chrysemys_picta_bellii
ENSUMAG00000004054	-	100	58.726	ENSEASG00005020355	-	96	58.726	Equus_asinus_asinus
ENSUMAG00000004054	-	98	58.495	ENSEASG00005020335	-	99	60.938	Equus_asinus_asinus
ENSUMAG00000004054	-	99	56.742	ENSECAG00000002021	-	95	56.108	Equus_caballus
ENSUMAG00000004054	-	99	56.402	ENSECAG00000013505	-	95	57.911	Equus_caballus
ENSUMAG00000004054	-	99	61.253	ENSECAG00000002193	-	99	60.000	Equus_caballus
ENSUMAG00000004054	-	97	62.189	ENSGAGG00000020594	-	95	58.266	Gopherus_agassizii
ENSUMAG00000004054	-	95	48.964	ENSLACG00000004191	-	91	50.320	Latimeria_chalumnae
ENSUMAG00000004054	-	100	64.619	ENSMPUG00000008442	-	96	63.995	Mustela_putorius_furo
ENSUMAG00000004054	-	100	65.013	ENSMPUG00000006213	-	96	64.841	Mustela_putorius_furo
ENSUMAG00000004054	-	100	60.763	ENSOARG00000003770	-	100	61.224	Ovis_aries
ENSUMAG00000004054	-	94	48.435	ENSPPAG00000037706	-	87	52.749	Pan_paniscus
ENSUMAG00000004054	-	98	53.610	ENSPSIG00000004614	-	94	53.610	Pelodiscus_sinensis
ENSUMAG00000004054	-	95	51.737	ENSSBOG00000022380	-	86	51.737	Saimiri_boliviensis_boliviensis
ENSUMAG00000004054	-	98	60.052	ENSSSCG00000031774	-	95	60.966	Sus_scrofa
ENSUMAG00000004054	-	99	69.113	ENSUAMG00000028270	-	96	68.730	Ursus_americanus
ENSUMAG00000004054	-	100	62.803	ENSUAMG00000027381	-	100	62.803	Ursus_americanus
ENSUMAG00000004054	-	95	60.877	ENSVVUG00000002085	-	90	59.091	Vulpes_vulpes
ENSUMAG00000004054	-	100	66.199	ENSVVUG00000001996	-	100	65.773	Vulpes_vulpes