EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000004061 (Gene tree)
Gene ID: 103677245
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 154-like
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 11299 bases
Position: chrKK498731.1:748384-759682
Accession: 103677245
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000005090	zf-C2H2	PF00096.26	2.6e-111	1	19
ENSUMAP00000005090	zf-C2H2	PF00096.26	2.6e-111	2	19
ENSUMAP00000005090	zf-C2H2	PF00096.26	2.6e-111	3	19
ENSUMAP00000005090	zf-C2H2	PF00096.26	2.6e-111	4	19
ENSUMAP00000005090	zf-C2H2	PF00096.26	2.6e-111	5	19
ENSUMAP00000005090	zf-C2H2	PF00096.26	2.6e-111	6	19
ENSUMAP00000005090	zf-C2H2	PF00096.26	2.6e-111	7	19
ENSUMAP00000005090	zf-C2H2	PF00096.26	2.6e-111	8	19
ENSUMAP00000005090	zf-C2H2	PF00096.26	2.6e-111	9	19
ENSUMAP00000005090	zf-C2H2	PF00096.26	2.6e-111	10	19
ENSUMAP00000005090	zf-C2H2	PF00096.26	2.6e-111	11	19
ENSUMAP00000005090	zf-C2H2	PF00096.26	2.6e-111	12	19
ENSUMAP00000005090	zf-C2H2	PF00096.26	2.6e-111	13	19
ENSUMAP00000005090	zf-C2H2	PF00096.26	2.6e-111	14	19
ENSUMAP00000005090	zf-C2H2	PF00096.26	2.6e-111	15	19
ENSUMAP00000005090	zf-C2H2	PF00096.26	2.6e-111	16	19
ENSUMAP00000005090	zf-C2H2	PF00096.26	2.6e-111	17	19
ENSUMAP00000005090	zf-C2H2	PF00096.26	2.6e-111	18	19
ENSUMAP00000005090	zf-C2H2	PF00096.26	2.6e-111	19	19
ENSUMAP00000005090	zf-met	PF12874.7	4.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000006161	-	3943	-	ENSUMAP00000005090	783 (aa)	XP_008704725	UPI0004DFE58B

Gene Model

Click here to download ENSUMAG00000004061's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000004061's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000004061	-	99	47.670	ENSUMAG00000007135	-	92	47.670
ENSUMAG00000004061	-	98	37.647	ENSUMAG00000003733	PRDM5	85	36.239
ENSUMAG00000004061	-	95	47.427	ENSUMAG00000023065	ZNF233	77	47.427
ENSUMAG00000004061	-	95	54.355	ENSUMAG00000017894	-	80	54.355
ENSUMAG00000004061	-	95	54.012	ENSUMAG00000019336	-	100	54.012
ENSUMAG00000004061	-	97	50.712	ENSUMAG00000023930	ZNF454	89	50.712
ENSUMAG00000004061	-	99	57.912	ENSUMAG00000024602	-	97	57.320
ENSUMAG00000004061	-	99	48.228	ENSUMAG00000007577	-	99	48.228
ENSUMAG00000004061	-	96	53.361	ENSUMAG00000023068	ZNF235	77	53.361
ENSUMAG00000004061	-	96	53.077	ENSUMAG00000017193	ZFP69B	74	53.077
ENSUMAG00000004061	-	75	37.209	ENSUMAG00000004744	-	65	37.209
ENSUMAG00000004061	-	100	51.867	ENSUMAG00000014322	ZFP1	91	47.305
ENSUMAG00000004061	-	100	60.494	ENSUMAG00000004051	-	100	61.814
ENSUMAG00000004061	-	100	62.803	ENSUMAG00000004054	-	100	62.803
ENSUMAG00000004061	-	95	53.681	ENSUMAG00000024767	-	78	53.681
ENSUMAG00000004061	-	96	54.861	ENSUMAG00000023056	-	92	54.861
ENSUMAG00000004061	-	81	38.889	ENSUMAG00000004755	-	62	38.889
ENSUMAG00000004061	-	95	54.545	ENSUMAG00000013351	ZNF768	64	54.118
ENSUMAG00000004061	-	95	34.254	ENSUMAG00000024271	ZFP64	72	35.616
ENSUMAG00000004061	-	78	57.143	ENSUMAG00000002662	ZNF574	80	56.897
ENSUMAG00000004061	-	98	43.881	ENSUMAG00000007151	-	90	44.072
ENSUMAG00000004061	-	75	40.385	ENSUMAG00000024458	SNAI1	51	40.385
ENSUMAG00000004061	-	96	45.880	ENSUMAG00000019496	-	99	45.880
ENSUMAG00000004061	-	96	53.668	ENSUMAG00000023059	ZNF226	78	53.668
ENSUMAG00000004061	-	95	47.100	ENSUMAG00000014213	ZNF317	92	47.100
ENSUMAG00000004061	-	95	40.789	ENSUMAG00000005073	ZNF384	51	42.759
ENSUMAG00000004061	-	75	37.209	ENSUMAG00000006525	SNAI2	52	37.209
ENSUMAG00000004061	-	95	34.498	ENSUMAG00000015722	ZNF770	97	34.934
ENSUMAG00000004061	-	78	45.185	ENSUMAG00000011251	-	100	45.185
ENSUMAG00000004061	-	76	35.238	ENSUMAG00000016941	GTF3A	89	43.548

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000004061	-	96	64.698	ENSBTAG00000038088	-	100	64.698	Bos_taurus
ENSUMAG00000004061	-	100	66.369	ENSCAFG00000029340	-	96	66.369	Canis_familiaris
ENSUMAG00000004061	-	100	66.369	ENSCAFG00020014950	-	100	66.369	Canis_lupus_dingo
ENSUMAG00000004061	-	99	61.083	ENSCAFG00020014929	-	99	61.083	Canis_lupus_dingo
ENSUMAG00000004061	-	100	60.145	ENSCPBG00000017494	-	94	60.145	Chrysemys_picta_bellii
ENSUMAG00000004061	-	98	59.624	ENSEASG00005020335	-	99	63.021	Equus_asinus_asinus
ENSUMAG00000004061	-	100	63.822	ENSEASG00005020355	-	93	63.822	Equus_asinus_asinus
ENSUMAG00000004061	-	100	64.297	ENSECAG00000013505	-	95	64.297	Equus_caballus
ENSUMAG00000004061	-	99	66.236	ENSECAG00000002021	-	92	66.236	Equus_caballus
ENSUMAG00000004061	-	99	63.824	ENSECAG00000002193	-	99	63.824	Equus_caballus
ENSUMAG00000004061	-	96	65.525	ENSGAGG00000020594	-	91	65.525	Gopherus_agassizii
ENSUMAG00000004061	-	99	54.423	ENSLACG00000004191	-	79	54.423	Latimeria_chalumnae
ENSUMAG00000004061	-	100	58.057	ENSMPUG00000008442	-	96	58.450	Mustela_putorius_furo
ENSUMAG00000004061	-	100	64.803	ENSMPUG00000006213	-	96	64.930	Mustela_putorius_furo
ENSUMAG00000004061	-	100	64.713	ENSOARG00000003770	-	100	64.713	Ovis_aries
ENSUMAG00000004061	-	96	56.348	ENSPPAG00000037706	-	83	56.348	Pan_paniscus
ENSUMAG00000004061	-	95	55.786	ENSPSIG00000004614	-	98	55.786	Pelodiscus_sinensis
ENSUMAG00000004061	-	96	53.139	ENSSBOG00000022380	-	84	56.679	Saimiri_boliviensis_boliviensis
ENSUMAG00000004061	-	94	65.359	ENSSSCG00000031774	-	95	64.407	Sus_scrofa
ENSUMAG00000004061	-	100	61.807	ENSUAMG00000028270	-	96	63.089	Ursus_americanus
ENSUMAG00000004061	-	100	99.617	ENSUAMG00000027381	-	100	99.617	Ursus_americanus
ENSUMAG00000004061	-	98	60.032	ENSVVUG00000002085	-	91	61.969	Vulpes_vulpes
ENSUMAG00000004061	-	100	66.497	ENSVVUG00000001996	-	100	66.497	Vulpes_vulpes