EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000004346 (Gene tree)
Gene ID: 103674872
Gene Symbol: CCDC12
Alias: -
Full Name: coiled-coil domain containing 12
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 50616 bases
Position: chrKK498686.1:8661643-8712258
Accession: 103674872
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000005499	cwf18	PF08315.12	5.3e-38	1	1
ENSUMAP00000005504	cwf18	PF08315.12	2.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000006635	CCDC12-202	666	-	ENSUMAP00000005504	187 (aa)	-	-
ENSUMAT00000006630	CCDC12-201	603	-	ENSUMAP00000005499	166 (aa)	XP_008702082	UPI00004BD708

Gene Model

Click here to download ENSUMAG00000004346's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000004346's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000004346	CCDC12	100	93.976	ENSG00000160799	CCDC12	100	94.382	Homo_sapiens
ENSUMAG00000004346	CCDC12	96	71.605	ENSAPOG00000014426	ccdc12	59	71.605	Acanthochromis_polyacanthus
ENSUMAG00000004346	CCDC12	100	98.795	ENSAMEG00000012658	CCDC12	100	98.795	Ailuropoda_melanoleuca
ENSUMAG00000004346	CCDC12	68	78.761	ENSACIG00000015192	ccdc12	80	78.761	Amphilophus_citrinellus
ENSUMAG00000004346	CCDC12	69	79.130	ENSACIG00000022676	-	81	79.130	Amphilophus_citrinellus
ENSUMAG00000004346	CCDC12	96	72.050	ENSAOCG00000024127	ccdc12	95	72.050	Amphiprion_ocellaris
ENSUMAG00000004346	CCDC12	96	71.605	ENSAPEG00000009155	ccdc12	84	71.605	Amphiprion_percula
ENSUMAG00000004346	CCDC12	81	71.111	ENSATEG00000004807	ccdc12	100	71.111	Anabas_testudineus
ENSUMAG00000004346	CCDC12	81	72.794	ENSAPLG00000005482	CCDC12	99	72.794	Anas_platyrhynchos
ENSUMAG00000004346	CCDC12	98	75.595	ENSACAG00000004727	CCDC12	86	75.595	Anolis_carolinensis
ENSUMAG00000004346	CCDC12	81	95.522	ENSANAG00000024483	CCDC12	100	95.522	Aotus_nancymaae
ENSUMAG00000004346	CCDC12	96	70.988	ENSACLG00000005356	ccdc12	98	70.988	Astatotilapia_calliptera
ENSUMAG00000004346	CCDC12	93	61.783	ENSACLG00000012742	-	96	61.783	Astatotilapia_calliptera
ENSUMAG00000004346	CCDC12	96	68.902	ENSAMXG00000016319	ccdc12	98	68.902	Astyanax_mexicanus
ENSUMAG00000004346	CCDC12	100	92.857	ENSBTAG00000011311	CCDC12	100	94.048	Bos_taurus
ENSUMAG00000004346	CCDC12	80	40.580	WBGene00022092	Y69A2AR.21	86	39.355	Caenorhabditis_elegans
ENSUMAG00000004346	CCDC12	100	94.578	ENSCJAG00000002280	CCDC12	100	94.578	Callithrix_jacchus
ENSUMAG00000004346	CCDC12	100	100.000	ENSCAFG00000013588	CCDC12	100	100.000	Canis_familiaris
ENSUMAG00000004346	CCDC12	100	100.000	ENSCAFG00020014024	CCDC12	93	100.000	Canis_lupus_dingo
ENSUMAG00000004346	CCDC12	100	92.262	ENSCHIG00000014512	CCDC12	100	93.452	Capra_hircus
ENSUMAG00000004346	CCDC12	100	95.181	ENSTSYG00000032837	CCDC12	100	95.181	Carlito_syrichta
ENSUMAG00000004346	CCDC12	81	76.119	ENSCAPG00000007935	CCDC12	100	76.119	Cavia_aperea
ENSUMAG00000004346	CCDC12	100	96.988	ENSCPOG00000032515	CCDC12	100	96.988	Cavia_porcellus
ENSUMAG00000004346	CCDC12	100	94.578	ENSCCAG00000020126	CCDC12	93	94.578	Cebus_capucinus
ENSUMAG00000004346	CCDC12	100	78.235	ENSCATG00000033681	CCDC12	92	78.235	Cercocebus_atys
ENSUMAG00000004346	CCDC12	100	96.988	ENSCLAG00000016013	CCDC12	100	96.988	Chinchilla_lanigera
ENSUMAG00000004346	CCDC12	100	93.976	ENSCSAG00000016154	CCDC12	93	93.976	Chlorocebus_sabaeus
ENSUMAG00000004346	CCDC12	99	76.506	ENSCPBG00000015804	CCDC12	79	76.506	Chrysemys_picta_bellii
ENSUMAG00000004346	CCDC12	83	55.319	ENSCING00000005261	-	81	55.319	Ciona_intestinalis
ENSUMAG00000004346	CCDC12	100	93.976	ENSCANG00000020857	CCDC12	93	93.976	Colobus_angolensis_palliatus
ENSUMAG00000004346	CCDC12	100	94.578	ENSCGRG00001000459	Ccdc12	100	94.578	Cricetulus_griseus_chok1gshd
ENSUMAG00000004346	CCDC12	100	94.578	ENSCGRG00000012816	Ccdc12	100	94.578	Cricetulus_griseus_crigri
ENSUMAG00000004346	CCDC12	91	70.588	ENSCSEG00000004543	ccdc12	93	70.588	Cynoglossus_semilaevis
ENSUMAG00000004346	CCDC12	81	71.111	ENSCVAG00000011342	ccdc12	100	71.111	Cyprinodon_variegatus
ENSUMAG00000004346	CCDC12	96	67.500	ENSDARG00000023003	ccdc12	98	67.500	Danio_rerio
ENSUMAG00000004346	CCDC12	100	84.337	ENSDORG00000024399	-	100	84.337	Dipodomys_ordii
ENSUMAG00000004346	CCDC12	100	94.578	ENSDORG00000016567	-	100	94.578	Dipodomys_ordii
ENSUMAG00000004346	CCDC12	92	44.444	FBgn0039732	CG15525	88	44.444	Drosophila_melanogaster
ENSUMAG00000004346	CCDC12	68	92.920	ENSETEG00000000030	CCDC12	100	92.920	Echinops_telfairi
ENSUMAG00000004346	CCDC12	98	62.577	ENSEBUG00000005674	ccdc12	100	62.577	Eptatretus_burgeri
ENSUMAG00000004346	CCDC12	100	97.590	ENSEASG00005008148	-	69	97.590	Equus_asinus_asinus
ENSUMAG00000004346	CCDC12	100	92.169	ENSECAG00000008649	CCDC12	100	92.169	Equus_caballus
ENSUMAG00000004346	CCDC12	96	69.136	ENSELUG00000024105	ccdc12	98	69.753	Esox_lucius
ENSUMAG00000004346	CCDC12	100	99.398	ENSFCAG00000015474	CCDC12	100	99.398	Felis_catus
ENSUMAG00000004346	CCDC12	94	64.780	ENSFALG00000001895	CCDC12	98	64.780	Ficedula_albicollis
ENSUMAG00000004346	CCDC12	99	97.561	ENSFDAG00000002549	CCDC12	99	97.561	Fukomys_damarensis
ENSUMAG00000004346	CCDC12	96	70.988	ENSFHEG00000016247	ccdc12	91	70.988	Fundulus_heteroclitus
ENSUMAG00000004346	CCDC12	96	61.491	ENSGMOG00000016901	ccdc12	98	61.491	Gadus_morhua
ENSUMAG00000004346	CCDC12	87	71.724	ENSGAFG00000006762	ccdc12	98	69.565	Gambusia_affinis
ENSUMAG00000004346	CCDC12	96	67.702	ENSGACG00000008629	ccdc12	98	67.702	Gasterosteus_aculeatus
ENSUMAG00000004346	CCDC12	100	78.235	ENSGAGG00000019688	CCDC12	100	78.235	Gopherus_agassizii
ENSUMAG00000004346	CCDC12	100	93.976	ENSGGOG00000009012	CCDC12	93	93.976	Gorilla_gorilla
ENSUMAG00000004346	CCDC12	96	71.605	ENSHBUG00000016447	ccdc12	98	71.605	Haplochromis_burtoni
ENSUMAG00000004346	CCDC12	100	96.386	ENSHGLG00000014058	CCDC12	100	96.386	Heterocephalus_glaber_female
ENSUMAG00000004346	CCDC12	100	96.386	ENSHGLG00100005918	CCDC12	100	96.386	Heterocephalus_glaber_male
ENSUMAG00000004346	CCDC12	95	67.901	ENSHCOG00000015164	ccdc12	98	67.901	Hippocampus_comes
ENSUMAG00000004346	CCDC12	96	67.284	ENSIPUG00000001310	Ccdc12	98	67.284	Ictalurus_punctatus
ENSUMAG00000004346	CCDC12	100	96.988	ENSSTOG00000003085	CCDC12	100	96.988	Ictidomys_tridecemlineatus
ENSUMAG00000004346	CCDC12	100	94.578	ENSJJAG00000014918	Ccdc12	100	94.578	Jaculus_jaculus
ENSUMAG00000004346	CCDC12	96	68.098	ENSKMAG00000013891	ccdc12	98	68.098	Kryptolebias_marmoratus
ENSUMAG00000004346	CCDC12	96	70.625	ENSLBEG00000024714	ccdc12	85	70.625	Labrus_bergylta
ENSUMAG00000004346	CCDC12	98	73.171	ENSLOCG00000005683	ccdc12	92	73.171	Lepisosteus_oculatus
ENSUMAG00000004346	CCDC12	98	89.571	ENSLAFG00000027745	-	100	89.571	Loxodonta_africana
ENSUMAG00000004346	CCDC12	67	97.321	ENSLAFG00000022573	-	98	97.321	Loxodonta_africana
ENSUMAG00000004346	CCDC12	100	93.373	ENSMFAG00000002976	CCDC12	93	93.373	Macaca_fascicularis
ENSUMAG00000004346	CCDC12	100	93.373	ENSMMUG00000019810	CCDC12	93	93.373	Macaca_mulatta
ENSUMAG00000004346	CCDC12	100	93.373	ENSMNEG00000035785	CCDC12	93	93.373	Macaca_nemestrina
ENSUMAG00000004346	CCDC12	100	93.976	ENSMLEG00000038060	CCDC12	93	93.976	Mandrillus_leucophaeus
ENSUMAG00000004346	CCDC12	87	73.288	ENSMAMG00000012165	ccdc12	98	70.370	Mastacembelus_armatus
ENSUMAG00000004346	CCDC12	96	71.605	ENSMZEG00005014728	ccdc12	98	71.605	Maylandia_zebra
ENSUMAG00000004346	CCDC12	93	62.420	ENSMZEG00005019013	-	96	62.420	Maylandia_zebra
ENSUMAG00000004346	CCDC12	80	71.642	ENSMGAG00000002815	CCDC12	100	64.972	Meleagris_gallopavo
ENSUMAG00000004346	CCDC12	100	93.976	ENSMAUG00000008879	Ccdc12	100	93.976	Mesocricetus_auratus
ENSUMAG00000004346	CCDC12	100	94.611	ENSMICG00000032886	CCDC12	100	95.808	Microcebus_murinus
ENSUMAG00000004346	CCDC12	100	94.578	ENSMOCG00000004483	Ccdc12	100	94.578	Microtus_ochrogaster
ENSUMAG00000004346	CCDC12	65	75.000	ENSMMOG00000001860	ccdc12	74	75.000	Mola_mola
ENSUMAG00000004346	CCDC12	100	67.665	ENSMODG00000022615	-	100	67.665	Monodelphis_domestica
ENSUMAG00000004346	CCDC12	100	80.357	ENSMODG00000013967	-	100	80.952	Monodelphis_domestica
ENSUMAG00000004346	CCDC12	100	67.665	ENSMODG00000025021	-	100	67.665	Monodelphis_domestica
ENSUMAG00000004346	CCDC12	96	69.753	ENSMALG00000011850	ccdc12	98	69.753	Monopterus_albus
ENSUMAG00000004346	CCDC12	100	93.373	MGP_CAROLIEiJ_G0032737	-	100	93.373	Mus_caroli
ENSUMAG00000004346	CCDC12	100	93.373	ENSMUSG00000019659	Ccdc12	100	93.373	Mus_musculus
ENSUMAG00000004346	CCDC12	100	93.373	MGP_PahariEiJ_G0015604	Ccdc12	100	93.373	Mus_pahari
ENSUMAG00000004346	CCDC12	100	93.976	MGP_SPRETEiJ_G0033885	Ccdc12	100	93.976	Mus_spretus
ENSUMAG00000004346	CCDC12	69	91.228	ENSMPUG00000015080	-	61	77.419	Mustela_putorius_furo
ENSUMAG00000004346	CCDC12	100	92.169	ENSMLUG00000009547	CCDC12	100	92.169	Myotis_lucifugus
ENSUMAG00000004346	CCDC12	100	94.578	ENSNGAG00000004149	Ccdc12	100	94.578	Nannospalax_galili
ENSUMAG00000004346	CCDC12	96	66.038	ENSNBRG00000015275	ccdc12	97	66.038	Neolamprologus_brichardi
ENSUMAG00000004346	CCDC12	100	92.169	ENSNLEG00000006219	CCDC12	100	92.169	Nomascus_leucogenys
ENSUMAG00000004346	CCDC12	99	88.415	ENSOPRG00000005086	CCDC12	99	89.634	Ochotona_princeps
ENSUMAG00000004346	CCDC12	100	97.590	ENSODEG00000012202	CCDC12	100	97.590	Octodon_degus
ENSUMAG00000004346	CCDC12	96	71.605	ENSONIG00000003061	ccdc12	98	71.605	Oreochromis_niloticus
ENSUMAG00000004346	CCDC12	80	75.373	ENSOANG00000004263	-	100	75.373	Ornithorhynchus_anatinus
ENSUMAG00000004346	CCDC12	100	96.988	ENSOCUG00000012431	CCDC12	85	96.988	Oryctolagus_cuniculus
ENSUMAG00000004346	CCDC12	94	68.553	ENSORLG00000008126	ccdc12	96	68.553	Oryzias_latipes
ENSUMAG00000004346	CCDC12	96	69.565	ENSORLG00020013927	ccdc12	98	69.565	Oryzias_latipes_hni
ENSUMAG00000004346	CCDC12	96	69.565	ENSORLG00015020115	ccdc12	98	69.565	Oryzias_latipes_hsok
ENSUMAG00000004346	CCDC12	96	69.565	ENSOMEG00000022304	ccdc12	98	69.565	Oryzias_melastigma
ENSUMAG00000004346	CCDC12	96	69.565	ENSOMEG00000014082	ccdc12	98	69.565	Oryzias_melastigma
ENSUMAG00000004346	CCDC12	67	96.429	ENSOGAG00000016807	CCDC12	100	96.429	Otolemur_garnettii
ENSUMAG00000004346	CCDC12	81	90.511	ENSOARG00000006426	CCDC12	100	91.971	Ovis_aries
ENSUMAG00000004346	CCDC12	100	93.373	ENSPPAG00000028782	CCDC12	93	93.373	Pan_paniscus
ENSUMAG00000004346	CCDC12	100	99.398	ENSPPRG00000013547	CCDC12	100	99.398	Panthera_pardus
ENSUMAG00000004346	CCDC12	100	99.398	ENSPTIG00000014875	CCDC12	95	99.398	Panthera_tigris_altaica
ENSUMAG00000004346	CCDC12	100	93.976	ENSPTRG00000014862	CCDC12	93	93.976	Pan_troglodytes
ENSUMAG00000004346	CCDC12	100	93.976	ENSPANG00000017485	CCDC12	95	93.976	Papio_anubis
ENSUMAG00000004346	CCDC12	96	69.565	ENSPKIG00000019130	ccdc12	98	72.222	Paramormyrops_kingsleyae
ENSUMAG00000004346	CCDC12	67	83.036	ENSPSIG00000010867	CCDC12	100	83.036	Pelodiscus_sinensis
ENSUMAG00000004346	CCDC12	96	69.753	ENSPMGG00000012211	ccdc12	98	69.753	Periophthalmus_magnuspinnatus
ENSUMAG00000004346	CCDC12	100	74.251	ENSPEMG00000001376	-	100	74.251	Peromyscus_maniculatus_bairdii
ENSUMAG00000004346	CCDC12	100	94.578	ENSPEMG00000022196	-	100	94.578	Peromyscus_maniculatus_bairdii
ENSUMAG00000004346	CCDC12	94	66.879	ENSPMAG00000000005	ccdc12	99	65.680	Petromyzon_marinus
ENSUMAG00000004346	CCDC12	100	81.928	ENSPCIG00000025941	CCDC12	100	81.928	Phascolarctos_cinereus
ENSUMAG00000004346	CCDC12	84	73.759	ENSPFOG00000000343	ccdc12	98	70.370	Poecilia_formosa
ENSUMAG00000004346	CCDC12	96	69.565	ENSPLAG00000019010	ccdc12	98	69.565	Poecilia_latipinna
ENSUMAG00000004346	CCDC12	84	73.759	ENSPMEG00000022371	ccdc12	79	70.370	Poecilia_mexicana
ENSUMAG00000004346	CCDC12	96	70.370	ENSPREG00000020932	ccdc12	79	70.370	Poecilia_reticulata
ENSUMAG00000004346	CCDC12	100	93.976	ENSPPYG00000013924	CCDC12	82	93.976	Pongo_abelii
ENSUMAG00000004346	CCDC12	100	95.808	ENSPCAG00000005800	CCDC12	100	95.808	Procavia_capensis
ENSUMAG00000004346	CCDC12	100	95.808	ENSPCOG00000018682	CCDC12	93	95.808	Propithecus_coquereli
ENSUMAG00000004346	CCDC12	100	96.386	ENSPVAG00000004204	CCDC12	100	96.386	Pteropus_vampyrus
ENSUMAG00000004346	CCDC12	96	71.605	ENSPNYG00000016295	ccdc12	98	71.605	Pundamilia_nyererei
ENSUMAG00000004346	CCDC12	96	54.321	ENSPNAG00000028558	ccdc12	90	77.679	Pygocentrus_nattereri
ENSUMAG00000004346	CCDC12	100	93.373	ENSRNOG00000020946	Ccdc12	100	93.373	Rattus_norvegicus
ENSUMAG00000004346	CCDC12	100	93.976	ENSRBIG00000039910	CCDC12	93	93.976	Rhinopithecus_bieti
ENSUMAG00000004346	CCDC12	100	93.976	ENSRROG00000039721	CCDC12	100	93.976	Rhinopithecus_roxellana
ENSUMAG00000004346	CCDC12	100	94.578	ENSSBOG00000035443	CCDC12	93	94.578	Saimiri_boliviensis_boliviensis
ENSUMAG00000004346	CCDC12	100	81.928	ENSSHAG00000003265	-	100	81.928	Sarcophilus_harrisii
ENSUMAG00000004346	CCDC12	97	69.939	ENSSFOG00015001307	ccdc12	99	69.939	Scleropages_formosus
ENSUMAG00000004346	CCDC12	96	70.988	ENSSMAG00000019856	ccdc12	98	70.988	Scophthalmus_maximus
ENSUMAG00000004346	CCDC12	94	70.253	ENSSDUG00000006549	ccdc12	96	70.253	Seriola_dumerili
ENSUMAG00000004346	CCDC12	96	70.370	ENSSLDG00000015956	ccdc12	98	70.370	Seriola_lalandi_dorsalis
ENSUMAG00000004346	CCDC12	58	96.875	ENSSARG00000004686	-	58	96.875	Sorex_araneus
ENSUMAG00000004346	CCDC12	69	72.174	ENSSPUG00000013054	CCDC12	91	50.676	Sphenodon_punctatus
ENSUMAG00000004346	CCDC12	96	70.988	ENSSPAG00000007010	ccdc12	98	70.988	Stegastes_partitus
ENSUMAG00000004346	CCDC12	93	53.247	ENSSSCG00000007882	-	97	53.247	Sus_scrofa
ENSUMAG00000004346	CCDC12	100	98.795	ENSSSCG00000011329	-	100	98.795	Sus_scrofa
ENSUMAG00000004346	CCDC12	69	63.492	ENSTGUG00000000186	CCDC12	100	63.492	Taeniopygia_guttata
ENSUMAG00000004346	CCDC12	96	66.038	ENSTRUG00000014023	ccdc12	83	66.038	Takifugu_rubripes
ENSUMAG00000004346	CCDC12	96	70.440	ENSTNIG00000018407	ccdc12	96	70.440	Tetraodon_nigroviridis
ENSUMAG00000004346	CCDC12	100	70.060	ENSTBEG00000000048	CCDC12	100	70.060	Tupaia_belangeri
ENSUMAG00000004346	CCDC12	100	87.500	ENSTTRG00000015854	CCDC12	100	87.500	Tursiops_truncatus
ENSUMAG00000004346	CCDC12	100	93.976	ENSUAMG00000025548	CCDC12	97	100.000	Ursus_americanus
ENSUMAG00000004346	CCDC12	68	77.876	ENSVPAG00000000070	-	100	77.876	Vicugna_pacos
ENSUMAG00000004346	CCDC12	100	100.000	ENSVVUG00000004582	CCDC12	100	100.000	Vulpes_vulpes
ENSUMAG00000004346	CCDC12	80	80.451	ENSXETG00000013123	ccdc12	98	80.451	Xenopus_tropicalis
ENSUMAG00000004346	CCDC12	96	69.565	ENSXCOG00000019741	ccdc12	98	69.565	Xiphophorus_couchianus
ENSUMAG00000004346	CCDC12	96	69.565	ENSXMAG00000014098	ccdc12	79	69.565	Xiphophorus_maculatus