EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000004549 (Gene tree)
Gene ID: 103677903
Gene Symbol: SMARCAD1
Alias: -
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 76580 bases
Position: chrKK498743.1:5625154-5701733
Accession: 103677903
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000005762	ResIII	PF04851.15	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000006941	SMARCAD1-201	5260	-	ENSUMAP00000005762	1027 (aa)	XP_008705380	UPI0004DFD646

Gene Model

Click here to download ENSUMAG00000004549's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000004549's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000004549	SMARCAD1	51	35.728	ENSUMAG00000009733	CHD1L	76	37.584
ENSUMAG00000004549	SMARCAD1	50	38.953	ENSUMAG00000004073	SMARCA1	67	41.356
ENSUMAG00000004549	SMARCAD1	51	38.532	ENSUMAG00000004748	HELLS	78	38.069

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000004549	SMARCAD1	100	97.566	ENSG00000163104	SMARCAD1	100	99.161	Homo_sapiens
ENSUMAG00000004549	SMARCAD1	98	63.068	ENSAPOG00000011446	smarcad1a	95	62.535	Acanthochromis_polyacanthus
ENSUMAG00000004549	SMARCAD1	100	99.805	ENSAMEG00000005844	SMARCAD1	100	99.805	Ailuropoda_melanoleuca
ENSUMAG00000004549	SMARCAD1	67	68.401	ENSACIG00000018326	smarcad1a	100	68.401	Amphilophus_citrinellus
ENSUMAG00000004549	SMARCAD1	100	62.926	ENSAOCG00000019762	smarcad1a	96	62.256	Amphiprion_ocellaris
ENSUMAG00000004549	SMARCAD1	100	63.068	ENSAPEG00000003889	smarcad1a	96	62.535	Amphiprion_percula
ENSUMAG00000004549	SMARCAD1	87	62.921	ENSATEG00000015608	smarcad1a	93	62.921	Anabas_testudineus
ENSUMAG00000004549	SMARCAD1	94	71.811	ENSAPLG00000004630	SMARCAD1	100	72.531	Anas_platyrhynchos
ENSUMAG00000004549	SMARCAD1	100	69.923	ENSACAG00000013554	SMARCAD1	100	70.309	Anolis_carolinensis
ENSUMAG00000004549	SMARCAD1	100	96.793	ENSANAG00000020488	SMARCAD1	100	96.793	Aotus_nancymaae
ENSUMAG00000004549	SMARCAD1	98	62.376	ENSACLG00000017063	smarcad1a	89	61.180	Astatotilapia_calliptera
ENSUMAG00000004549	SMARCAD1	78	59.046	ENSAMXG00000019130	smarcad1b	85	60.025	Astyanax_mexicanus
ENSUMAG00000004549	SMARCAD1	69	60.955	ENSAMXG00000015470	smarcad1a	98	60.955	Astyanax_mexicanus
ENSUMAG00000004549	SMARCAD1	100	97.376	ENSBTAG00000017061	SMARCAD1	100	97.376	Bos_taurus
ENSUMAG00000004549	SMARCAD1	61	42.723	WBGene00010845	M03C11.8	63	42.702	Caenorhabditis_elegans
ENSUMAG00000004549	SMARCAD1	100	97.079	ENSCJAG00000006778	SMARCAD1	100	97.079	Callithrix_jacchus
ENSUMAG00000004549	SMARCAD1	100	98.930	ENSCAFG00000010026	SMARCAD1	100	98.930	Canis_familiaris
ENSUMAG00000004549	SMARCAD1	87	99.326	ENSCAFG00020003994	SMARCAD1	100	99.326	Canis_lupus_dingo
ENSUMAG00000004549	SMARCAD1	100	97.471	ENSCHIG00000012905	SMARCAD1	100	97.471	Capra_hircus
ENSUMAG00000004549	SMARCAD1	100	97.079	ENSTSYG00000002706	SMARCAD1	100	97.079	Carlito_syrichta
ENSUMAG00000004549	SMARCAD1	90	77.599	ENSCAPG00000016744	SMARCAD1	96	78.364	Cavia_aperea
ENSUMAG00000004549	SMARCAD1	100	93.708	ENSCPOG00000011398	SMARCAD1	100	93.708	Cavia_porcellus
ENSUMAG00000004549	SMARCAD1	100	97.079	ENSCCAG00000022264	SMARCAD1	100	98.826	Cebus_capucinus
ENSUMAG00000004549	SMARCAD1	100	97.274	ENSCATG00000035663	SMARCAD1	100	98.090	Cercocebus_atys
ENSUMAG00000004549	SMARCAD1	82	98.333	ENSCSAG00000004186	SMARCAD1	100	98.333	Chlorocebus_sabaeus
ENSUMAG00000004549	SMARCAD1	100	73.608	ENSCPBG00000013203	SMARCAD1	100	73.846	Chrysemys_picta_bellii
ENSUMAG00000004549	SMARCAD1	64	49.775	ENSCING00000001688	-	99	49.775	Ciona_intestinalis
ENSUMAG00000004549	SMARCAD1	100	97.079	ENSCANG00000003556	SMARCAD1	100	99.161	Colobus_angolensis_palliatus
ENSUMAG00000004549	SMARCAD1	100	92.697	ENSCGRG00001015056	Smarcad1	100	92.697	Cricetulus_griseus_chok1gshd
ENSUMAG00000004549	SMARCAD1	100	92.697	ENSCGRG00000014087	Smarcad1	100	92.697	Cricetulus_griseus_crigri
ENSUMAG00000004549	SMARCAD1	100	62.245	ENSCSEG00000017903	smarcad1a	98	60.000	Cynoglossus_semilaevis
ENSUMAG00000004549	SMARCAD1	96	60.545	ENSCSEG00000014419	-	91	58.904	Cynoglossus_semilaevis
ENSUMAG00000004549	SMARCAD1	78	58.303	ENSDARG00000073721	smarcad1b	82	59.518	Danio_rerio
ENSUMAG00000004549	SMARCAD1	85	54.466	ENSDARG00000014041	smarcad1a	92	55.568	Danio_rerio
ENSUMAG00000004549	SMARCAD1	100	96.884	ENSDNOG00000000806	-	100	96.884	Dasypus_novemcinctus
ENSUMAG00000004549	SMARCAD1	100	92.427	ENSDORG00000012331	Smarcad1	100	92.427	Dipodomys_ordii
ENSUMAG00000004549	SMARCAD1	63	45.538	FBgn0032157	Etl1	86	43.129	Drosophila_melanogaster
ENSUMAG00000004549	SMARCAD1	62	45.706	ENSEBUG00000003969	smarcad1a	96	46.353	Eptatretus_burgeri
ENSUMAG00000004549	SMARCAD1	100	98.249	ENSEASG00005012382	SMARCAD1	100	98.249	Equus_asinus_asinus
ENSUMAG00000004549	SMARCAD1	100	98.249	ENSECAG00000011562	SMARCAD1	100	98.249	Equus_caballus
ENSUMAG00000004549	SMARCAD1	79	56.727	ENSELUG00000019154	smarcad1b	79	59.207	Esox_lucius
ENSUMAG00000004549	SMARCAD1	100	51.673	ENSELUG00000018535	smarcad1a	100	50.835	Esox_lucius
ENSUMAG00000004549	SMARCAD1	100	98.637	ENSFCAG00000003958	SMARCAD1	100	99.832	Felis_catus
ENSUMAG00000004549	SMARCAD1	100	67.435	ENSFALG00000006089	SMARCAD1	100	67.243	Ficedula_albicollis
ENSUMAG00000004549	SMARCAD1	100	95.131	ENSFDAG00000017027	SMARCAD1	100	95.131	Fukomys_damarensis
ENSUMAG00000004549	SMARCAD1	94	65.321	ENSFHEG00000012778	smarcad1a	87	62.396	Fundulus_heteroclitus
ENSUMAG00000004549	SMARCAD1	84	58.180	ENSGMOG00000018995	smarcad1a	97	57.604	Gadus_morhua
ENSUMAG00000004549	SMARCAD1	77	73.325	ENSGALG00000037339	SMARCAD1	94	73.946	Gallus_gallus
ENSUMAG00000004549	SMARCAD1	90	66.667	ENSGAFG00000013498	smarcad1a	60	66.667	Gambusia_affinis
ENSUMAG00000004549	SMARCAD1	85	58.163	ENSGACG00000007327	smarcad1a	99	58.617	Gasterosteus_aculeatus
ENSUMAG00000004549	SMARCAD1	100	73.679	ENSGAGG00000008582	SMARCAD1	100	73.867	Gopherus_agassizii
ENSUMAG00000004549	SMARCAD1	100	97.663	ENSGGOG00000023001	SMARCAD1	100	97.663	Gorilla_gorilla
ENSUMAG00000004549	SMARCAD1	98	62.235	ENSHBUG00000011042	smarcad1a	89	61.043	Haplochromis_burtoni
ENSUMAG00000004549	SMARCAD1	100	95.049	ENSHGLG00000005070	SMARCAD1	100	95.049	Heterocephalus_glaber_female
ENSUMAG00000004549	SMARCAD1	100	95.049	ENSHGLG00100006812	SMARCAD1	100	95.049	Heterocephalus_glaber_male
ENSUMAG00000004549	SMARCAD1	63	63.919	ENSHCOG00000007848	smarcad1a	64	60.508	Hippocampus_comes
ENSUMAG00000004549	SMARCAD1	62	65.415	ENSIPUG00000000242	smarcad1a	72	60.948	Ictalurus_punctatus
ENSUMAG00000004549	SMARCAD1	81	57.057	ENSIPUG00000022817	smarcad1b	89	57.126	Ictalurus_punctatus
ENSUMAG00000004549	SMARCAD1	100	96.790	ENSSTOG00000001227	SMARCAD1	100	96.790	Ictidomys_tridecemlineatus
ENSUMAG00000004549	SMARCAD1	100	95.229	ENSJJAG00000022342	Smarcad1	100	95.229	Jaculus_jaculus
ENSUMAG00000004549	SMARCAD1	64	64.502	ENSKMAG00000021351	smarcad1a	66	61.142	Kryptolebias_marmoratus
ENSUMAG00000004549	SMARCAD1	65	65.821	ENSLBEG00000008088	smarcad1a	63	65.821	Labrus_bergylta
ENSUMAG00000004549	SMARCAD1	100	54.000	ENSLOCG00000012909	smarcad1a	100	55.908	Lepisosteus_oculatus
ENSUMAG00000004549	SMARCAD1	100	95.131	ENSLAFG00000000040	SMARCAD1	100	95.131	Loxodonta_africana
ENSUMAG00000004549	SMARCAD1	100	97.274	ENSMFAG00000042606	SMARCAD1	100	97.978	Macaca_fascicularis
ENSUMAG00000004549	SMARCAD1	87	97.978	ENSMMUG00000022242	SMARCAD1	100	97.978	Macaca_mulatta
ENSUMAG00000004549	SMARCAD1	100	97.176	ENSMNEG00000038117	SMARCAD1	100	98.993	Macaca_nemestrina
ENSUMAG00000004549	SMARCAD1	100	97.176	ENSMLEG00000038333	SMARCAD1	100	99.161	Mandrillus_leucophaeus
ENSUMAG00000004549	SMARCAD1	69	63.421	ENSMAMG00000000933	smarcad1a	68	63.245	Mastacembelus_armatus
ENSUMAG00000004549	SMARCAD1	92	66.459	ENSMZEG00005005203	smarcad1a	100	49.636	Maylandia_zebra
ENSUMAG00000004549	SMARCAD1	94	64.815	ENSMGAG00000005577	SMARCAD1	100	64.815	Meleagris_gallopavo
ENSUMAG00000004549	SMARCAD1	100	92.502	ENSMAUG00000008417	Smarcad1	100	92.502	Mesocricetus_auratus
ENSUMAG00000004549	SMARCAD1	100	96.016	ENSMICG00000009746	SMARCAD1	100	96.016	Microcebus_murinus
ENSUMAG00000004549	SMARCAD1	100	92.210	ENSMOCG00000017142	Smarcad1	100	92.210	Microtus_ochrogaster
ENSUMAG00000004549	SMARCAD1	77	58.742	ENSMMOG00000000275	smarcad1a	92	64.829	Mola_mola
ENSUMAG00000004549	SMARCAD1	100	81.581	ENSMODG00000019268	SMARCAD1	100	81.581	Monodelphis_domestica
ENSUMAG00000004549	SMARCAD1	94	93.506	MGP_CAROLIEiJ_G0028458	-	77	93.506	Mus_caroli
ENSUMAG00000004549	SMARCAD1	100	91.732	ENSMUSG00000029920	Smarcad1	100	91.732	Mus_musculus
ENSUMAG00000004549	SMARCAD1	100	91.926	MGP_PahariEiJ_G0022198	Smarcad1	100	91.926	Mus_pahari
ENSUMAG00000004549	SMARCAD1	100	91.829	MGP_SPRETEiJ_G0029462	Smarcad1	100	91.829	Mus_spretus
ENSUMAG00000004549	SMARCAD1	100	99.416	ENSMPUG00000002111	SMARCAD1	100	99.416	Mustela_putorius_furo
ENSUMAG00000004549	SMARCAD1	100	93.975	ENSMLUG00000000425	SMARCAD1	100	93.975	Myotis_lucifugus
ENSUMAG00000004549	SMARCAD1	100	93.574	ENSNGAG00000000810	Smarcad1	100	93.574	Nannospalax_galili
ENSUMAG00000004549	SMARCAD1	66	63.127	ENSNBRG00000012749	smarcad1a	85	61.236	Neolamprologus_brichardi
ENSUMAG00000004549	SMARCAD1	100	97.663	ENSNLEG00000014225	SMARCAD1	100	99.161	Nomascus_leucogenys
ENSUMAG00000004549	SMARCAD1	100	93.786	ENSODEG00000004334	SMARCAD1	100	93.689	Octodon_degus
ENSUMAG00000004549	SMARCAD1	63	65.895	ENSONIG00000015059	smarcad1a	89	57.732	Oreochromis_niloticus
ENSUMAG00000004549	SMARCAD1	80	84.903	ENSOANG00000013764	SMARCAD1	100	84.903	Ornithorhynchus_anatinus
ENSUMAG00000004549	SMARCAD1	100	96.300	ENSOCUG00000017283	SMARCAD1	100	96.300	Oryctolagus_cuniculus
ENSUMAG00000004549	SMARCAD1	93	65.060	ENSORLG00000004869	smarcad1a	93	61.326	Oryzias_latipes
ENSUMAG00000004549	SMARCAD1	93	65.060	ENSORLG00020020569	smarcad1a	93	61.295	Oryzias_latipes_hni
ENSUMAG00000004549	SMARCAD1	93	64.910	ENSORLG00015009045	smarcad1a	92	61.188	Oryzias_latipes_hsok
ENSUMAG00000004549	SMARCAD1	65	64.812	ENSOMEG00000023032	smarcad1a	68	60.935	Oryzias_melastigma
ENSUMAG00000004549	SMARCAD1	100	95.238	ENSOGAG00000011444	SMARCAD1	100	95.238	Otolemur_garnettii
ENSUMAG00000004549	SMARCAD1	100	97.374	ENSOARG00000017851	SMARCAD1	100	97.374	Ovis_aries
ENSUMAG00000004549	SMARCAD1	100	97.760	ENSPPAG00000035715	SMARCAD1	100	97.760	Pan_paniscus
ENSUMAG00000004549	SMARCAD1	100	98.734	ENSPPRG00000024756	SMARCAD1	100	99.832	Panthera_pardus
ENSUMAG00000004549	SMARCAD1	100	98.542	ENSPTIG00000017868	SMARCAD1	100	98.542	Panthera_tigris_altaica
ENSUMAG00000004549	SMARCAD1	100	97.663	ENSPTRG00000023126	SMARCAD1	100	99.161	Pan_troglodytes
ENSUMAG00000004549	SMARCAD1	100	96.019	ENSPANG00000019757	SMARCAD1	100	96.019	Papio_anubis
ENSUMAG00000004549	SMARCAD1	100	73.110	ENSPSIG00000010255	SMARCAD1	100	73.110	Pelodiscus_sinensis
ENSUMAG00000004549	SMARCAD1	62	64.541	ENSPMGG00000010735	smarcad1a	95	63.018	Periophthalmus_magnuspinnatus
ENSUMAG00000004549	SMARCAD1	100	77.498	ENSPEMG00000001854	Smarcad1	100	78.286	Peromyscus_maniculatus_bairdii
ENSUMAG00000004549	SMARCAD1	84	51.977	ENSPMAG00000003516	smarcad1a	99	47.628	Petromyzon_marinus
ENSUMAG00000004549	SMARCAD1	77	87.611	ENSPCIG00000008137	SMARCAD1	98	89.011	Phascolarctos_cinereus
ENSUMAG00000004549	SMARCAD1	94	66.615	ENSPFOG00000019116	smarcad1a	89	62.204	Poecilia_formosa
ENSUMAG00000004549	SMARCAD1	94	66.459	ENSPLAG00000000108	smarcad1a	89	62.064	Poecilia_latipinna
ENSUMAG00000004549	SMARCAD1	94	66.615	ENSPMEG00000009155	smarcad1a	89	62.204	Poecilia_mexicana
ENSUMAG00000004549	SMARCAD1	95	67.083	ENSPREG00000018185	smarcad1a	94	62.587	Poecilia_reticulata
ENSUMAG00000004549	SMARCAD1	100	96.890	ENSPPYG00000014935	SMARCAD1	100	96.890	Pongo_abelii
ENSUMAG00000004549	SMARCAD1	73	97.073	ENSPCOG00000020478	SMARCAD1	89	97.073	Propithecus_coquereli
ENSUMAG00000004549	SMARCAD1	100	95.918	ENSPVAG00000001760	SMARCAD1	100	95.918	Pteropus_vampyrus
ENSUMAG00000004549	SMARCAD1	67	62.029	ENSPNYG00000010087	smarcad1a	85	60.815	Pundamilia_nyererei
ENSUMAG00000004549	SMARCAD1	84	55.407	ENSPNAG00000001663	smarcad1a	90	54.645	Pygocentrus_nattereri
ENSUMAG00000004549	SMARCAD1	78	59.041	ENSPNAG00000010099	smarcad1b	84	60.000	Pygocentrus_nattereri
ENSUMAG00000004549	SMARCAD1	100	92.510	ENSRNOG00000006391	Smarcad1	100	92.510	Rattus_norvegicus
ENSUMAG00000004549	SMARCAD1	100	97.274	ENSRBIG00000041989	SMARCAD1	100	97.274	Rhinopithecus_bieti
ENSUMAG00000004549	SMARCAD1	100	97.274	ENSRROG00000035309	SMARCAD1	100	97.274	Rhinopithecus_roxellana
ENSUMAG00000004549	SMARCAD1	100	97.079	ENSSBOG00000032114	SMARCAD1	100	98.826	Saimiri_boliviensis_boliviensis
ENSUMAG00000004549	SMARCAD1	100	82.642	ENSSHAG00000001279	SMARCAD1	100	82.546	Sarcophilus_harrisii
ENSUMAG00000004549	SMARCAD1	84	55.641	ENSSFOG00015016814	smarcad1b	100	50.000	Scleropages_formosus
ENSUMAG00000004549	SMARCAD1	74	57.772	ENSSFOG00015020909	smarcad1a	100	57.772	Scleropages_formosus
ENSUMAG00000004549	SMARCAD1	68	63.688	ENSSMAG00000001326	smarcad1a	67	62.654	Scophthalmus_maximus
ENSUMAG00000004549	SMARCAD1	68	62.784	ENSSDUG00000022338	smarcad1a	84	62.256	Seriola_dumerili
ENSUMAG00000004549	SMARCAD1	92	66.303	ENSSLDG00000024986	smarcad1a	90	66.303	Seriola_lalandi_dorsalis
ENSUMAG00000004549	SMARCAD1	58	84.757	ENSSPUG00000004633	SMARCAD1	100	84.757	Sphenodon_punctatus
ENSUMAG00000004549	SMARCAD1	97	63.649	ENSSPAG00000001970	smarcad1a	96	62.483	Stegastes_partitus
ENSUMAG00000004549	SMARCAD1	100	97.957	ENSSSCG00000009193	SMARCAD1	100	99.168	Sus_scrofa
ENSUMAG00000004549	SMARCAD1	76	77.934	ENSTGUG00000003127	SMARCAD1	100	78.189	Taeniopygia_guttata
ENSUMAG00000004549	SMARCAD1	84	57.569	ENSTNIG00000017585	smarcad1a	99	57.895	Tetraodon_nigroviridis
ENSUMAG00000004549	SMARCAD1	91	97.619	ENSTBEG00000002789	SMARCAD1	91	97.619	Tupaia_belangeri
ENSUMAG00000004549	SMARCAD1	98	97.120	ENSTTRG00000000226	SMARCAD1	100	97.120	Tursiops_truncatus
ENSUMAG00000004549	SMARCAD1	100	99.708	ENSUAMG00000022262	SMARCAD1	100	99.708	Ursus_americanus
ENSUMAG00000004549	SMARCAD1	100	98.735	ENSVVUG00000007271	SMARCAD1	100	99.168	Vulpes_vulpes
ENSUMAG00000004549	SMARCAD1	84	66.098	ENSXETG00000019214	smarcad1	100	65.984	Xenopus_tropicalis
ENSUMAG00000004549	SMARCAD1	76	59.407	ENSXCOG00000005232	smarcad1a	88	57.564	Xiphophorus_couchianus
ENSUMAG00000004549	SMARCAD1	62	66.303	ENSXMAG00000015350	smarcad1a	64	61.732	Xiphophorus_maculatus