EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000004748 (Gene tree)
Gene ID: 103667975
Gene Symbol: HELLS
Alias: LSH|Nbla10143|PASG|SMARCA6
Full Name: helicase%2C lymphoid specific
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 33624 bases
Position: chrKK498624.1:32866651-32900274
Accession: 4861
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000006165	ResIII	PF04851.15	1.1e-07	1	1
ENSUMAP00000006200	ResIII	PF04851.15	1.3e-07	1	1
ENSUMAP00000006102	ResIII	PF04851.15	2e-07	1	1
ENSUMAP00000006117	ResIII	PF04851.15	2.3e-07	1	1
ENSUMAP00000006194	ResIII	PF04851.15	5e-07	1	1
ENSUMAP00000006089	ResIII	PF04851.15	5.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000007432	HELLS-204	2436	-	ENSUMAP00000006165	811 (aa)	-	-
ENSUMAT00000007354	HELLS-202	2475	-	ENSUMAP00000006102	824 (aa)	-	-
ENSUMAT00000007466	HELLS-205	2349	-	ENSUMAP00000006194	782 (aa)	-	-
ENSUMAT00000007472	HELLS-206	2797	-	ENSUMAP00000006200	694 (aa)	-	-
ENSUMAT00000007333	HELLS-201	2502	-	ENSUMAP00000006089	833 (aa)	-	-
ENSUMAT00000007369	HELLS-203	2457	-	ENSUMAP00000006117	818 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000004748's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000004748's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000004748	HELLS	64	35.644	ENSUMAG00000023603	RAD54L	64	35.644
ENSUMAG00000004748	HELLS	64	35.749	ENSUMAG00000016401	-	52	36.232
ENSUMAG00000004748	HELLS	84	38.017	ENSUMAG00000002017	CHD6	70	35.520
ENSUMAG00000004748	HELLS	78	38.069	ENSUMAG00000004549	SMARCAD1	51	38.532
ENSUMAG00000004748	HELLS	78	40.110	ENSUMAG00000009733	CHD1L	84	35.248
ENSUMAG00000004748	HELLS	77	49.004	ENSUMAG00000004073	SMARCA1	76	38.131

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000004748	HELLS	99	95.785	ENSG00000119969	HELLS	100	96.359	Homo_sapiens
ENSUMAG00000004748	HELLS	98	68.041	ENSAPOG00000007707	hells	97	65.789	Acanthochromis_polyacanthus
ENSUMAG00000004748	HELLS	99	98.671	ENSAMEG00000013525	HELLS	99	98.671	Ailuropoda_melanoleuca
ENSUMAG00000004748	HELLS	98	67.302	ENSACIG00000018996	hells	99	66.667	Amphilophus_citrinellus
ENSUMAG00000004748	HELLS	98	68.041	ENSAOCG00000006348	hells	98	64.423	Amphiprion_ocellaris
ENSUMAG00000004748	HELLS	98	67.836	ENSAPEG00000001422	hells	98	64.062	Amphiprion_percula
ENSUMAG00000004748	HELLS	98	68.282	ENSATEG00000008107	hells	99	64.917	Anabas_testudineus
ENSUMAG00000004748	HELLS	98	85.125	ENSAPLG00000002649	HELLS	99	81.830	Anas_platyrhynchos
ENSUMAG00000004748	HELLS	98	77.892	ENSACAG00000028785	HELLS	96	75.417	Anolis_carolinensis
ENSUMAG00000004748	HELLS	99	94.032	ENSANAG00000034765	-	100	93.705	Aotus_nancymaae
ENSUMAG00000004748	HELLS	98	67.251	ENSACLG00000007613	hells	99	64.125	Astatotilapia_calliptera
ENSUMAG00000004748	HELLS	97	68.491	ENSAMXG00000002088	hells	98	67.930	Astyanax_mexicanus
ENSUMAG00000004748	HELLS	90	96.178	ENSBTAG00000005979	HELLS	100	95.827	Bos_taurus
ENSUMAG00000004748	HELLS	99	94.469	ENSCJAG00000015819	HELLS	100	94.278	Callithrix_jacchus
ENSUMAG00000004748	HELLS	99	97.962	ENSCAFG00000008090	HELLS	99	97.467	Canis_familiaris
ENSUMAG00000004748	HELLS	99	97.962	ENSCAFG00020004809	HELLS	98	98.346	Canis_lupus_dingo
ENSUMAG00000004748	HELLS	100	93.276	ENSCHIG00000019462	HELLS	99	92.280	Capra_hircus
ENSUMAG00000004748	HELLS	99	93.741	ENSTSYG00000005811	-	99	93.276	Carlito_syrichta
ENSUMAG00000004748	HELLS	99	92.754	ENSCPOG00000003043	HELLS	99	92.633	Cavia_porcellus
ENSUMAG00000004748	HELLS	64	93.197	ENSCCAG00000026761	HELLS	99	95.376	Cebus_capucinus
ENSUMAG00000004748	HELLS	99	95.051	ENSCATG00000033830	HELLS	100	95.652	Cercocebus_atys
ENSUMAG00000004748	HELLS	99	93.750	ENSCLAG00000003938	HELLS	100	93.066	Chinchilla_lanigera
ENSUMAG00000004748	HELLS	99	94.905	ENSCSAG00000006181	HELLS	100	95.512	Chlorocebus_sabaeus
ENSUMAG00000004748	HELLS	98	83.895	ENSCPBG00000025739	HELLS	99	84.844	Chrysemys_picta_bellii
ENSUMAG00000004748	HELLS	99	95.051	ENSCANG00000037736	HELLS	100	95.091	Colobus_angolensis_palliatus
ENSUMAG00000004748	HELLS	99	91.557	ENSCGRG00001017410	Hells	100	90.024	Cricetulus_griseus_chok1gshd
ENSUMAG00000004748	HELLS	98	66.861	ENSCSEG00000016985	hells	99	64.378	Cynoglossus_semilaevis
ENSUMAG00000004748	HELLS	76	61.787	ENSCVAG00000000159	hells	97	62.406	Cyprinodon_variegatus
ENSUMAG00000004748	HELLS	98	68.559	ENSDARG00000057738	hells	95	65.770	Danio_rerio
ENSUMAG00000004748	HELLS	87	94.893	ENSDNOG00000017758	HELLS	100	95.419	Dasypus_novemcinctus
ENSUMAG00000004748	HELLS	99	92.442	ENSDORG00000011812	Hells	99	90.689	Dipodomys_ordii
ENSUMAG00000004748	HELLS	60	74.815	ENSEBUG00000016152	hells	82	74.815	Eptatretus_burgeri
ENSUMAG00000004748	HELLS	99	96.798	ENSEASG00005011764	HELLS	100	95.128	Equus_asinus_asinus
ENSUMAG00000004748	HELLS	99	96.507	ENSECAG00000018810	HELLS	99	95.889	Equus_caballus
ENSUMAG00000004748	HELLS	80	97.826	ENSEEUG00000007680	HELLS	90	97.826	Erinaceus_europaeus
ENSUMAG00000004748	HELLS	98	67.347	ENSELUG00000014909	hells	93	64.295	Esox_lucius
ENSUMAG00000004748	HELLS	99	97.380	ENSFCAG00000005206	HELLS	100	97.896	Felis_catus
ENSUMAG00000004748	HELLS	98	84.018	ENSFALG00000007136	HELLS	99	80.877	Ficedula_albicollis
ENSUMAG00000004748	HELLS	99	93.169	ENSFDAG00000010042	HELLS	100	92.336	Fukomys_damarensis
ENSUMAG00000004748	HELLS	99	65.517	ENSFHEG00000022950	hells	97	64.276	Fundulus_heteroclitus
ENSUMAG00000004748	HELLS	98	82.551	ENSGALG00000005451	HELLS	100	83.095	Gallus_gallus
ENSUMAG00000004748	HELLS	98	66.812	ENSGAFG00000001204	hells	94	63.715	Gambusia_affinis
ENSUMAG00000004748	HELLS	96	66.269	ENSGACG00000003897	hells	91	64.112	Gasterosteus_aculeatus
ENSUMAG00000004748	HELLS	98	83.602	ENSGAGG00000010269	HELLS	100	84.075	Gopherus_agassizii
ENSUMAG00000004748	HELLS	99	95.494	ENSGGOG00000008103	HELLS	100	95.798	Gorilla_gorilla
ENSUMAG00000004748	HELLS	98	67.540	ENSHBUG00000010270	hells	99	64.125	Haplochromis_burtoni
ENSUMAG00000004748	HELLS	87	91.411	ENSHGLG00000006537	-	100	90.798	Heterocephalus_glaber_female
ENSUMAG00000004748	HELLS	99	94.186	ENSHGLG00000011377	-	100	93.431	Heterocephalus_glaber_female
ENSUMAG00000004748	HELLS	99	83.721	ENSHGLG00100001957	-	95	82.990	Heterocephalus_glaber_male
ENSUMAG00000004748	HELLS	99	93.895	ENSHGLG00100017230	-	100	93.187	Heterocephalus_glaber_male
ENSUMAG00000004748	HELLS	98	65.985	ENSHCOG00000001119	hells	99	63.885	Hippocampus_comes
ENSUMAG00000004748	HELLS	98	67.587	ENSIPUG00000002634	HELLS	95	64.268	Ictalurus_punctatus
ENSUMAG00000004748	HELLS	99	95.203	ENSSTOG00000021976	HELLS	100	93.917	Ictidomys_tridecemlineatus
ENSUMAG00000004748	HELLS	99	87.685	ENSJJAG00000000865	Hells	99	87.685	Jaculus_jaculus
ENSUMAG00000004748	HELLS	97	68.639	ENSKMAG00000017279	hells	96	65.655	Kryptolebias_marmoratus
ENSUMAG00000004748	HELLS	99	68.017	ENSLBEG00000027807	hells	95	64.962	Labrus_bergylta
ENSUMAG00000004748	HELLS	99	94.913	ENSLAFG00000007049	HELLS	100	94.647	Loxodonta_africana
ENSUMAG00000004748	HELLS	99	95.051	ENSMFAG00000044053	HELLS	99	95.527	Macaca_fascicularis
ENSUMAG00000004748	HELLS	96	95.045	ENSMMUG00000017255	HELLS	100	95.665	Macaca_mulatta
ENSUMAG00000004748	HELLS	99	95.051	ENSMNEG00000042628	HELLS	100	95.652	Macaca_nemestrina
ENSUMAG00000004748	HELLS	99	95.051	ENSMLEG00000041751	HELLS	99	95.527	Mandrillus_leucophaeus
ENSUMAG00000004748	HELLS	97	67.452	ENSMAMG00000009850	hells	99	65.665	Mastacembelus_armatus
ENSUMAG00000004748	HELLS	98	67.540	ENSMZEG00005018414	hells	99	64.125	Maylandia_zebra
ENSUMAG00000004748	HELLS	98	83.871	ENSMGAG00000006818	HELLS	97	84.091	Meleagris_gallopavo
ENSUMAG00000004748	HELLS	99	91.703	ENSMAUG00000021941	Hells	97	89.210	Mesocricetus_auratus
ENSUMAG00000004748	HELLS	83	93.728	ENSMICG00000046554	-	95	93.728	Microcebus_murinus
ENSUMAG00000004748	HELLS	99	91.703	ENSMOCG00000019342	Hells	100	89.273	Microtus_ochrogaster
ENSUMAG00000004748	HELLS	99	63.372	ENSMMOG00000007950	hells	98	59.443	Mola_mola
ENSUMAG00000004748	HELLS	99	87.536	ENSMODG00000005589	-	51	85.857	Monodelphis_domestica
ENSUMAG00000004748	HELLS	99	66.861	ENSMALG00000010244	hells	94	62.797	Monopterus_albus
ENSUMAG00000004748	HELLS	99	91.557	MGP_CAROLIEiJ_G0022930	Hells	100	90.134	Mus_caroli
ENSUMAG00000004748	HELLS	99	91.342	ENSMUSG00000025001	Hells	100	90.134	Mus_musculus
ENSUMAG00000004748	HELLS	99	93.023	MGP_PahariEiJ_G0014423	Hells	100	91.352	Mus_pahari
ENSUMAG00000004748	HELLS	99	92.576	MGP_SPRETEiJ_G0023848	Hells	100	90.621	Mus_spretus
ENSUMAG00000004748	HELLS	99	97.703	ENSMPUG00000017131	HELLS	99	97.703	Mustela_putorius_furo
ENSUMAG00000004748	HELLS	99	92.576	ENSMLUG00000030511	HELLS	99	91.657	Myotis_lucifugus
ENSUMAG00000004748	HELLS	97	92.399	ENSNGAG00000014049	Hells	99	90.000	Nannospalax_galili
ENSUMAG00000004748	HELLS	99	63.610	ENSNBRG00000024242	hells	99	60.924	Neolamprologus_brichardi
ENSUMAG00000004748	HELLS	99	95.051	ENSNLEG00000012987	HELLS	100	95.652	Nomascus_leucogenys
ENSUMAG00000004748	HELLS	98	91.362	ENSODEG00000015916	HELLS	99	89.372	Octodon_degus
ENSUMAG00000004748	HELLS	97	67.599	ENSONIG00000013166	hells	94	64.540	Oreochromis_niloticus
ENSUMAG00000004748	HELLS	98	86.696	ENSOANG00000005139	HELLS	100	84.625	Ornithorhynchus_anatinus
ENSUMAG00000004748	HELLS	99	95.051	ENSOCUG00000026731	HELLS	99	93.833	Oryctolagus_cuniculus
ENSUMAG00000004748	HELLS	97	67.604	ENSORLG00000000987	hells	96	65.125	Oryzias_latipes
ENSUMAG00000004748	HELLS	97	67.456	ENSORLG00020003952	hells	96	64.858	Oryzias_latipes_hni
ENSUMAG00000004748	HELLS	98	67.151	ENSORLG00015010960	hells	96	65.032	Oryzias_latipes_hsok
ENSUMAG00000004748	HELLS	97	67.160	ENSOMEG00000000135	hells	94	64.137	Oryzias_melastigma
ENSUMAG00000004748	HELLS	99	94.041	ENSOGAG00000017145	HELLS	99	93.116	Otolemur_garnettii
ENSUMAG00000004748	HELLS	99	95.163	ENSOARG00000004495	HELLS	99	95.163	Ovis_aries
ENSUMAG00000004748	HELLS	99	95.494	ENSPPAG00000001726	HELLS	100	95.938	Pan_paniscus
ENSUMAG00000004748	HELLS	99	97.234	ENSPPRG00000005839	HELLS	100	97.756	Panthera_pardus
ENSUMAG00000004748	HELLS	99	97.234	ENSPTIG00000007647	HELLS	100	97.756	Panthera_tigris_altaica
ENSUMAG00000004748	HELLS	97	94.799	ENSPTRG00000002778	HELLS	99	95.279	Pan_troglodytes
ENSUMAG00000004748	HELLS	99	95.051	ENSPANG00000033528	HELLS	100	95.652	Papio_anubis
ENSUMAG00000004748	HELLS	98	67.591	ENSPKIG00000010890	hells	99	62.485	Paramormyrops_kingsleyae
ENSUMAG00000004748	HELLS	98	84.728	ENSPSIG00000005462	HELLS	100	82.071	Pelodiscus_sinensis
ENSUMAG00000004748	HELLS	98	65.936	ENSPMGG00000014690	hells	98	65.079	Periophthalmus_magnuspinnatus
ENSUMAG00000004748	HELLS	99	83.313	ENSPEMG00000017579	Hells	100	89.504	Peromyscus_maniculatus_bairdii
ENSUMAG00000004748	HELLS	97	64.339	ENSPMAG00000004376	hells	98	60.688	Petromyzon_marinus
ENSUMAG00000004748	HELLS	99	87.391	ENSPCIG00000013361	HELLS	99	85.216	Phascolarctos_cinereus
ENSUMAG00000004748	HELLS	98	66.279	ENSPFOG00000001954	hells	94	63.158	Poecilia_formosa
ENSUMAG00000004748	HELLS	98	66.134	ENSPLAG00000006504	hells	97	62.801	Poecilia_latipinna
ENSUMAG00000004748	HELLS	98	66.279	ENSPMEG00000003024	hells	97	62.942	Poecilia_mexicana
ENSUMAG00000004748	HELLS	98	65.793	ENSPREG00000020337	hells	96	61.140	Poecilia_reticulata
ENSUMAG00000004748	HELLS	100	89.528	ENSPPYG00000002502	HELLS	99	90.046	Pongo_abelii
ENSUMAG00000004748	HELLS	100	87.183	ENSPCAG00000013618	HELLS	99	87.062	Procavia_capensis
ENSUMAG00000004748	HELLS	99	94.905	ENSPCOG00000023985	HELLS	99	95.527	Propithecus_coquereli
ENSUMAG00000004748	HELLS	92	97.238	ENSPVAG00000017899	HELLS	90	97.238	Pteropus_vampyrus
ENSUMAG00000004748	HELLS	98	65.739	ENSPNYG00000009100	hells	99	62.578	Pundamilia_nyererei
ENSUMAG00000004748	HELLS	98	66.228	ENSPNAG00000029968	hells	96	64.086	Pygocentrus_nattereri
ENSUMAG00000004748	HELLS	99	92.285	ENSRNOG00000047104	Hells	99	90.810	Rattus_norvegicus
ENSUMAG00000004748	HELLS	99	92.285	ENSRNOG00000047692	LOC100911660	100	91.108	Rattus_norvegicus
ENSUMAG00000004748	HELLS	96	93.994	ENSRBIG00000041080	HELLS	99	95.870	Rhinopithecus_bieti
ENSUMAG00000004748	HELLS	99	95.051	ENSRROG00000040169	HELLS	100	95.652	Rhinopithecus_roxellana
ENSUMAG00000004748	HELLS	99	87.808	ENSSHAG00000014358	HELLS	100	85.576	Sarcophilus_harrisii
ENSUMAG00000004748	HELLS	98	69.679	ENSSFOG00015017895	hells	98	65.968	Scleropages_formosus
ENSUMAG00000004748	HELLS	98	67.158	ENSSMAG00000017423	hells	99	63.591	Scophthalmus_maximus
ENSUMAG00000004748	HELLS	99	67.493	ENSSDUG00000016924	hells	99	64.617	Seriola_dumerili
ENSUMAG00000004748	HELLS	97	66.421	ENSSLDG00000018960	hells	94	63.184	Seriola_lalandi_dorsalis
ENSUMAG00000004748	HELLS	99	83.942	ENSSPUG00000017425	HELLS	100	80.910	Sphenodon_punctatus
ENSUMAG00000004748	HELLS	97	68.242	ENSSPAG00000015579	hells	99	66.472	Stegastes_partitus
ENSUMAG00000004748	HELLS	99	96.215	ENSSSCG00000010486	HELLS	99	96.131	Sus_scrofa
ENSUMAG00000004748	HELLS	99	84.279	ENSTGUG00000007157	HELLS	99	80.918	Taeniopygia_guttata
ENSUMAG00000004748	HELLS	98	68.613	ENSTRUG00000000350	hells	96	64.606	Takifugu_rubripes
ENSUMAG00000004748	HELLS	98	58.153	ENSTNIG00000003738	hells	99	56.295	Tetraodon_nigroviridis
ENSUMAG00000004748	HELLS	100	98.411	ENSUAMG00000003343	HELLS	100	99.148	Ursus_americanus
ENSUMAG00000004748	HELLS	99	95.328	ENSVPAG00000010115	HELLS	99	94.438	Vicugna_pacos
ENSUMAG00000004748	HELLS	99	97.962	ENSVVUG00000022808	HELLS	99	97.703	Vulpes_vulpes
ENSUMAG00000004748	HELLS	98	66.129	ENSXCOG00000013840	hells	97	63.543	Xiphophorus_couchianus
ENSUMAG00000004748	HELLS	98	66.521	ENSXMAG00000005731	hells	97	64.681	Xiphophorus_maculatus