EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000005006 (Gene tree)
Gene ID: 103678993
Gene Symbol: EDC3
Alias: -
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 41604 bases
Position: chrKK498764.1:1784121-1825724
Accession: 103678993
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000006372	FDF	PF09532.10	2.1e-18	1	1
ENSUMAP00000006372	LSM14	PF12701.7	1.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000007668	EDC3-201	3726	XM_008708486	ENSUMAP00000006372	531 (aa)	XP_008706708	UPI0004DFDBAC

Gene Model

Click here to download ENSUMAG00000005006's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000005006's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000005006	EDC3	96	96.260	ENSG00000179151	EDC3	100	98.160	Homo_sapiens
ENSUMAG00000005006	EDC3	96	69.608	ENSAPOG00000010791	edc3	100	69.608	Acanthochromis_polyacanthus
ENSUMAG00000005006	EDC3	96	55.534	ENSAPOG00000008655	EDC3	100	55.534	Acanthochromis_polyacanthus
ENSUMAG00000005006	EDC3	96	100.000	ENSAMEG00000008963	EDC3	100	100.000	Ailuropoda_melanoleuca
ENSUMAG00000005006	EDC3	95	59.649	ENSACIG00000005330	EDC3	99	59.649	Amphilophus_citrinellus
ENSUMAG00000005006	EDC3	96	68.173	ENSACIG00000017751	edc3	100	68.173	Amphilophus_citrinellus
ENSUMAG00000005006	EDC3	96	58.333	ENSAOCG00000009103	-	100	58.333	Amphiprion_ocellaris
ENSUMAG00000005006	EDC3	96	69.608	ENSAOCG00000005431	edc3	100	69.608	Amphiprion_ocellaris
ENSUMAG00000005006	EDC3	96	58.333	ENSAPEG00000007841	EDC3	100	58.333	Amphiprion_percula
ENSUMAG00000005006	EDC3	96	69.608	ENSAPEG00000000968	edc3	100	69.608	Amphiprion_percula
ENSUMAG00000005006	EDC3	96	69.352	ENSATEG00000015505	edc3	100	69.352	Anabas_testudineus
ENSUMAG00000005006	EDC3	96	58.286	ENSATEG00000004205	-	100	58.286	Anabas_testudineus
ENSUMAG00000005006	EDC3	86	86.813	ENSAPLG00000008957	EDC3	100	86.813	Anas_platyrhynchos
ENSUMAG00000005006	EDC3	75	87.154	ENSACAG00000000460	-	100	87.154	Anolis_carolinensis
ENSUMAG00000005006	EDC3	96	96.457	ENSANAG00000024078	EDC3	100	96.457	Aotus_nancymaae
ENSUMAG00000005006	EDC3	96	67.191	ENSACLG00000007232	edc3	100	67.191	Astatotilapia_calliptera
ENSUMAG00000005006	EDC3	96	57.782	ENSACLG00000018776	-	100	57.782	Astatotilapia_calliptera
ENSUMAG00000005006	EDC3	96	71.094	ENSAMXG00000001589	edc3	100	71.094	Astyanax_mexicanus
ENSUMAG00000005006	EDC3	96	96.654	ENSBTAG00000007308	EDC3	100	96.654	Bos_taurus
ENSUMAG00000005006	EDC3	96	96.654	ENSCJAG00000017681	EDC3	100	96.654	Callithrix_jacchus
ENSUMAG00000005006	EDC3	96	98.622	ENSCAFG00000017935	EDC3	100	98.622	Canis_familiaris
ENSUMAG00000005006	EDC3	96	98.622	ENSCAFG00020003909	EDC3	100	98.622	Canis_lupus_dingo
ENSUMAG00000005006	EDC3	96	96.850	ENSCHIG00000023658	EDC3	100	96.850	Capra_hircus
ENSUMAG00000005006	EDC3	96	96.850	ENSTSYG00000004822	EDC3	100	96.850	Carlito_syrichta
ENSUMAG00000005006	EDC3	96	95.276	ENSCPOG00000015595	EDC3	100	95.276	Cavia_porcellus
ENSUMAG00000005006	EDC3	96	96.850	ENSCCAG00000021663	EDC3	100	96.850	Cebus_capucinus
ENSUMAG00000005006	EDC3	96	96.457	ENSCATG00000037511	EDC3	100	96.457	Cercocebus_atys
ENSUMAG00000005006	EDC3	96	95.276	ENSCLAG00000005700	EDC3	100	95.276	Chinchilla_lanigera
ENSUMAG00000005006	EDC3	96	96.457	ENSCSAG00000014239	EDC3	100	96.457	Chlorocebus_sabaeus
ENSUMAG00000005006	EDC3	96	89.173	ENSCPBG00000024239	EDC3	100	89.173	Chrysemys_picta_bellii
ENSUMAG00000005006	EDC3	96	37.500	ENSCING00000022142	-	99	37.500	Ciona_intestinalis
ENSUMAG00000005006	EDC3	96	96.457	ENSCANG00000028699	EDC3	100	96.457	Colobus_angolensis_palliatus
ENSUMAG00000005006	EDC3	96	95.866	ENSCGRG00001013874	Edc3	100	95.866	Cricetulus_griseus_chok1gshd
ENSUMAG00000005006	EDC3	96	95.866	ENSCGRG00000011885	Edc3	100	95.866	Cricetulus_griseus_crigri
ENSUMAG00000005006	EDC3	95	69.685	ENSCSEG00000012996	edc3	99	69.685	Cynoglossus_semilaevis
ENSUMAG00000005006	EDC3	96	69.020	ENSCVAG00000008023	edc3	100	69.020	Cyprinodon_variegatus
ENSUMAG00000005006	EDC3	95	68.627	ENSDARG00000051931	edc3	99	69.006	Danio_rerio
ENSUMAG00000005006	EDC3	96	84.690	ENSDNOG00000030661	EDC3	100	84.690	Dasypus_novemcinctus
ENSUMAG00000005006	EDC3	61	96.296	ENSETEG00000002398	-	64	96.296	Echinops_telfairi
ENSUMAG00000005006	EDC3	96	97.441	ENSEASG00005005071	EDC3	100	97.441	Equus_asinus_asinus
ENSUMAG00000005006	EDC3	96	97.441	ENSECAG00000017994	EDC3	100	97.441	Equus_caballus
ENSUMAG00000005006	EDC3	96	65.497	ENSELUG00000005794	edc3	100	65.497	Esox_lucius
ENSUMAG00000005006	EDC3	96	61.644	ENSELUG00000007607	EDC3	100	61.644	Esox_lucius
ENSUMAG00000005006	EDC3	98	97.495	ENSFCAG00000002014	EDC3	100	98.622	Felis_catus
ENSUMAG00000005006	EDC3	96	82.651	ENSFALG00000004543	EDC3	99	82.651	Ficedula_albicollis
ENSUMAG00000005006	EDC3	96	94.882	ENSFDAG00000012582	EDC3	100	94.882	Fukomys_damarensis
ENSUMAG00000005006	EDC3	96	69.216	ENSFHEG00000009375	edc3	100	69.216	Fundulus_heteroclitus
ENSUMAG00000005006	EDC3	96	67.836	ENSGMOG00000002715	edc3	100	67.773	Gadus_morhua
ENSUMAG00000005006	EDC3	96	87.992	ENSGALG00000040181	EDC3	100	87.992	Gallus_gallus
ENSUMAG00000005006	EDC3	96	67.583	ENSGAFG00000014433	edc3	100	67.647	Gambusia_affinis
ENSUMAG00000005006	EDC3	96	68.173	ENSGACG00000009783	edc3	100	68.173	Gasterosteus_aculeatus
ENSUMAG00000005006	EDC3	95	55.319	ENSGACG00000014671	EDC3	99	55.945	Gasterosteus_aculeatus
ENSUMAG00000005006	EDC3	96	88.780	ENSGAGG00000023477	EDC3	100	88.780	Gopherus_agassizii
ENSUMAG00000005006	EDC3	96	96.457	ENSGGOG00000003552	EDC3	100	96.457	Gorilla_gorilla
ENSUMAG00000005006	EDC3	96	57.782	ENSHBUG00000020817	EDC3	100	57.782	Haplochromis_burtoni
ENSUMAG00000005006	EDC3	96	67.191	ENSHBUG00000003635	edc3	100	67.191	Haplochromis_burtoni
ENSUMAG00000005006	EDC3	96	67.319	ENSHCOG00000016834	edc3	100	68.493	Hippocampus_comes
ENSUMAG00000005006	EDC3	95	70.254	ENSIPUG00000005695	edc3	100	70.254	Ictalurus_punctatus
ENSUMAG00000005006	EDC3	96	96.654	ENSSTOG00000013936	EDC3	100	96.654	Ictidomys_tridecemlineatus
ENSUMAG00000005006	EDC3	96	95.472	ENSJJAG00000008074	Edc3	100	95.472	Jaculus_jaculus
ENSUMAG00000005006	EDC3	96	68.762	ENSKMAG00000001243	edc3	100	68.762	Kryptolebias_marmoratus
ENSUMAG00000005006	EDC3	96	55.709	ENSKMAG00000001987	EDC3	100	55.709	Kryptolebias_marmoratus
ENSUMAG00000005006	EDC3	96	58.527	ENSLBEG00000017984	EDC3	100	58.527	Labrus_bergylta
ENSUMAG00000005006	EDC3	96	68.627	ENSLBEG00000013435	edc3	99	68.627	Labrus_bergylta
ENSUMAG00000005006	EDC3	96	77.670	ENSLACG00000014149	EDC3	100	77.670	Latimeria_chalumnae
ENSUMAG00000005006	EDC3	95	66.862	ENSLOCG00000014625	edc3	99	66.862	Lepisosteus_oculatus
ENSUMAG00000005006	EDC3	96	95.079	ENSLAFG00000002992	EDC3	100	95.079	Loxodonta_africana
ENSUMAG00000005006	EDC3	96	96.260	ENSMFAG00000043074	EDC3	100	96.260	Macaca_fascicularis
ENSUMAG00000005006	EDC3	96	96.260	ENSMMUG00000011071	EDC3	100	96.260	Macaca_mulatta
ENSUMAG00000005006	EDC3	96	96.260	ENSMNEG00000035316	EDC3	100	96.260	Macaca_nemestrina
ENSUMAG00000005006	EDC3	96	96.457	ENSMLEG00000030372	EDC3	100	96.457	Mandrillus_leucophaeus
ENSUMAG00000005006	EDC3	95	56.445	ENSMAMG00000005423	-	99	56.445	Mastacembelus_armatus
ENSUMAG00000005006	EDC3	96	69.745	ENSMAMG00000000505	edc3	100	69.745	Mastacembelus_armatus
ENSUMAG00000005006	EDC3	96	58.285	ENSMZEG00005005654	EDC3	100	58.285	Maylandia_zebra
ENSUMAG00000005006	EDC3	96	67.191	ENSMZEG00005004892	edc3	100	67.191	Maylandia_zebra
ENSUMAG00000005006	EDC3	96	87.008	ENSMGAG00000002617	EDC3	100	87.008	Meleagris_gallopavo
ENSUMAG00000005006	EDC3	96	95.866	ENSMICG00000043190	EDC3	100	95.866	Microcebus_murinus
ENSUMAG00000005006	EDC3	96	95.866	ENSMOCG00000016205	Edc3	100	95.866	Microtus_ochrogaster
ENSUMAG00000005006	EDC3	95	68.566	ENSMMOG00000012278	edc3	99	68.566	Mola_mola
ENSUMAG00000005006	EDC3	96	91.732	ENSMODG00000009442	EDC3	100	91.732	Monodelphis_domestica
ENSUMAG00000005006	EDC3	96	69.352	ENSMALG00000008658	edc3	100	69.352	Monopterus_albus
ENSUMAG00000005006	EDC3	96	95.472	MGP_CAROLIEiJ_G0032280	Edc3	100	96.923	Mus_caroli
ENSUMAG00000005006	EDC3	96	95.079	ENSMUSG00000038957	Edc3	100	96.923	Mus_musculus
ENSUMAG00000005006	EDC3	96	95.669	MGP_PahariEiJ_G0015146	Edc3	100	96.923	Mus_pahari
ENSUMAG00000005006	EDC3	96	94.882	MGP_SPRETEiJ_G0033420	Edc3	100	96.923	Mus_spretus
ENSUMAG00000005006	EDC3	96	98.819	ENSMPUG00000017293	EDC3	100	98.819	Mustela_putorius_furo
ENSUMAG00000005006	EDC3	96	96.078	ENSMLUG00000016382	EDC3	100	96.078	Myotis_lucifugus
ENSUMAG00000005006	EDC3	96	95.276	ENSNGAG00000010923	Edc3	100	95.276	Nannospalax_galili
ENSUMAG00000005006	EDC3	96	58.285	ENSNBRG00000007881	EDC3	100	58.285	Neolamprologus_brichardi
ENSUMAG00000005006	EDC3	96	67.583	ENSNBRG00000002434	edc3	100	67.583	Neolamprologus_brichardi
ENSUMAG00000005006	EDC3	96	86.811	ENSNLEG00000014577	EDC3	100	86.811	Nomascus_leucogenys
ENSUMAG00000005006	EDC3	96	90.551	ENSMEUG00000009077	EDC3	100	90.551	Notamacropus_eugenii
ENSUMAG00000005006	EDC3	75	98.148	ENSOPRG00000009540	-	79	98.148	Ochotona_princeps
ENSUMAG00000005006	EDC3	96	67.387	ENSONIG00000008434	edc3	100	67.387	Oreochromis_niloticus
ENSUMAG00000005006	EDC3	96	59.922	ENSONIG00000002932	-	100	59.922	Oreochromis_niloticus
ENSUMAG00000005006	EDC3	75	92.191	ENSOCUG00000017740	EDC3	86	92.191	Oryctolagus_cuniculus
ENSUMAG00000005006	EDC3	96	57.031	ENSORLG00000014399	-	98	57.031	Oryzias_latipes
ENSUMAG00000005006	EDC3	96	66.994	ENSORLG00000004883	edc3	100	66.994	Oryzias_latipes
ENSUMAG00000005006	EDC3	96	67.387	ENSORLG00020012262	edc3	100	67.387	Oryzias_latipes_hni
ENSUMAG00000005006	EDC3	96	57.031	ENSORLG00020019446	-	100	57.031	Oryzias_latipes_hni
ENSUMAG00000005006	EDC3	98	55.939	ENSORLG00015017635	-	98	55.939	Oryzias_latipes_hsok
ENSUMAG00000005006	EDC3	96	67.188	ENSORLG00015005634	edc3	100	67.188	Oryzias_latipes_hsok
ENSUMAG00000005006	EDC3	96	57.227	ENSOMEG00000017354	EDC3	100	57.227	Oryzias_melastigma
ENSUMAG00000005006	EDC3	96	68.627	ENSOMEG00000014026	edc3	100	68.627	Oryzias_melastigma
ENSUMAG00000005006	EDC3	96	96.063	ENSOGAG00000014441	EDC3	100	96.063	Otolemur_garnettii
ENSUMAG00000005006	EDC3	96	96.464	ENSOARG00000003476	EDC3	100	96.464	Ovis_aries
ENSUMAG00000005006	EDC3	96	96.457	ENSPPAG00000040143	EDC3	100	96.457	Pan_paniscus
ENSUMAG00000005006	EDC3	96	99.016	ENSPPRG00000006257	EDC3	100	99.016	Panthera_pardus
ENSUMAG00000005006	EDC3	96	99.016	ENSPTIG00000017424	EDC3	100	99.016	Panthera_tigris_altaica
ENSUMAG00000005006	EDC3	96	96.457	ENSPTRG00000007279	EDC3	100	96.457	Pan_troglodytes
ENSUMAG00000005006	EDC3	96	96.457	ENSPANG00000015997	EDC3	100	96.457	Papio_anubis
ENSUMAG00000005006	EDC3	96	68.945	ENSPKIG00000004416	edc3	100	69.922	Paramormyrops_kingsleyae
ENSUMAG00000005006	EDC3	96	66.602	ENSPKIG00000019810	EDC3	100	66.602	Paramormyrops_kingsleyae
ENSUMAG00000005006	EDC3	96	83.465	ENSPSIG00000008474	EDC3	100	83.661	Pelodiscus_sinensis
ENSUMAG00000005006	EDC3	96	66.732	ENSPMGG00000007223	edc3	100	66.732	Periophthalmus_magnuspinnatus
ENSUMAG00000005006	EDC3	96	95.472	ENSPEMG00000015260	Edc3	100	95.472	Peromyscus_maniculatus_bairdii
ENSUMAG00000005006	EDC3	97	89.669	ENSPCIG00000006276	EDC3	71	89.844	Phascolarctos_cinereus
ENSUMAG00000005006	EDC3	96	68.482	ENSPFOG00000012204	edc3	100	68.482	Poecilia_formosa
ENSUMAG00000005006	EDC3	96	68.482	ENSPLAG00000014420	edc3	100	68.482	Poecilia_latipinna
ENSUMAG00000005006	EDC3	96	68.482	ENSPMEG00000023289	edc3	100	68.482	Poecilia_mexicana
ENSUMAG00000005006	EDC3	96	68.959	ENSPREG00000016022	edc3	100	68.959	Poecilia_reticulata
ENSUMAG00000005006	EDC3	96	95.276	ENSPPYG00000006642	EDC3	100	95.276	Pongo_abelii
ENSUMAG00000005006	EDC3	84	98.148	ENSPCAG00000002802	EDC3	88	98.148	Procavia_capensis
ENSUMAG00000005006	EDC3	96	96.063	ENSPCOG00000013364	EDC3	100	96.063	Propithecus_coquereli
ENSUMAG00000005006	EDC3	96	95.472	ENSPVAG00000014733	EDC3	100	95.472	Pteropus_vampyrus
ENSUMAG00000005006	EDC3	96	57.782	ENSPNYG00000009669	EDC3	100	57.782	Pundamilia_nyererei
ENSUMAG00000005006	EDC3	96	67.191	ENSPNYG00000021797	edc3	100	67.191	Pundamilia_nyererei
ENSUMAG00000005006	EDC3	96	70.233	ENSPNAG00000019657	edc3	100	70.233	Pygocentrus_nattereri
ENSUMAG00000005006	EDC3	95	95.644	ENSRNOG00000019579	Edc3	99	95.644	Rattus_norvegicus
ENSUMAG00000005006	EDC3	96	96.063	ENSRBIG00000019488	EDC3	100	96.063	Rhinopithecus_bieti
ENSUMAG00000005006	EDC3	96	96.063	ENSRROG00000034959	EDC3	100	96.063	Rhinopithecus_roxellana
ENSUMAG00000005006	EDC3	96	96.654	ENSSBOG00000004896	EDC3	100	96.654	Saimiri_boliviensis_boliviensis
ENSUMAG00000005006	EDC3	92	91.002	ENSSHAG00000015075	EDC3	95	91.002	Sarcophilus_harrisii
ENSUMAG00000005006	EDC3	96	63.813	ENSSFOG00015002439	edc3	100	65.370	Scleropages_formosus
ENSUMAG00000005006	EDC3	96	70.135	ENSSFOG00015016939	edc3	100	70.817	Scleropages_formosus
ENSUMAG00000005006	EDC3	95	56.725	ENSSMAG00000010176	-	99	56.725	Scophthalmus_maximus
ENSUMAG00000005006	EDC3	96	68.369	ENSSMAG00000010695	edc3	100	68.959	Scophthalmus_maximus
ENSUMAG00000005006	EDC3	96	59.538	ENSSDUG00000007671	EDC3	100	59.538	Seriola_dumerili
ENSUMAG00000005006	EDC3	96	69.020	ENSSDUG00000021844	edc3	100	69.608	Seriola_dumerili
ENSUMAG00000005006	EDC3	98	67.557	ENSSLDG00000022046	edc3	100	69.608	Seriola_lalandi_dorsalis
ENSUMAG00000005006	EDC3	77	95.161	ENSSARG00000003907	EDC3	80	95.161	Sorex_araneus
ENSUMAG00000005006	EDC3	96	87.795	ENSSPUG00000008232	EDC3	100	87.795	Sphenodon_punctatus
ENSUMAG00000005006	EDC3	96	57.588	ENSSPAG00000020327	EDC3	100	57.588	Stegastes_partitus
ENSUMAG00000005006	EDC3	96	69.941	ENSSPAG00000010009	edc3	100	69.941	Stegastes_partitus
ENSUMAG00000005006	EDC3	96	96.850	ENSSSCG00000001903	EDC3	100	96.850	Sus_scrofa
ENSUMAG00000005006	EDC3	96	87.598	ENSTGUG00000004007	EDC3	100	87.598	Taeniopygia_guttata
ENSUMAG00000005006	EDC3	96	69.745	ENSTRUG00000017078	edc3	100	69.745	Takifugu_rubripes
ENSUMAG00000005006	EDC3	96	68.297	ENSTNIG00000016047	edc3	100	68.297	Tetraodon_nigroviridis
ENSUMAG00000005006	EDC3	96	96.260	ENSTTRG00000007990	EDC3	100	96.260	Tursiops_truncatus
ENSUMAG00000005006	EDC3	96	100.000	ENSUAMG00000026710	-	100	100.000	Ursus_americanus
ENSUMAG00000005006	EDC3	75	85.185	ENSVPAG00000003499	-	79	85.185	Vicugna_pacos
ENSUMAG00000005006	EDC3	96	98.819	ENSVVUG00000018601	EDC3	100	98.819	Vulpes_vulpes
ENSUMAG00000005006	EDC3	65	81.609	ENSXETG00000010622	edc3	99	82.759	Xenopus_tropicalis
ENSUMAG00000005006	EDC3	96	68.566	ENSXMAG00000007377	edc3	100	68.566	Xiphophorus_maculatus