EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000005328 (Gene tree)
Gene ID: 103672157
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 30308 bases
Position: chrKK498657.1:4176250-4206557
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000006846	RNA_pol_3_Rpc31	PF11705.8	4.8e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000008226	-	672	-	ENSUMAP00000006846	223 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000005328's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03020	RNA polymerase	KEGG
umr04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000005328's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000005328	-	95	45.116	ENSUMAG00000010324	-	98	46.725

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000005328	-	100	97.788	ENSAMEG00000013240	-	100	97.788	Ailuropoda_melanoleuca
ENSUMAG00000005328	-	100	91.928	ENSBTAG00000044077	POLR3G	100	91.928	Bos_taurus
ENSUMAG00000005328	-	100	98.655	ENSCAFG00000008281	POLR3G	100	98.655	Canis_familiaris
ENSUMAG00000005328	-	100	88.789	ENSCHIG00000018071	-	100	89.238	Capra_hircus
ENSUMAG00000005328	-	96	67.606	ENSCANG00000030502	-	100	68.075	Colobus_angolensis_palliatus
ENSUMAG00000005328	-	100	86.404	ENSDNOG00000004195	-	100	86.404	Dasypus_novemcinctus
ENSUMAG00000005328	-	100	70.404	ENSDNOG00000039468	-	100	70.852	Dasypus_novemcinctus
ENSUMAG00000005328	-	78	82.184	ENSETEG00000008379	-	90	82.184	Echinops_telfairi
ENSUMAG00000005328	-	100	96.413	ENSFCAG00000032444	-	100	96.413	Felis_catus
ENSUMAG00000005328	-	100	87.500	ENSSTOG00000019433	-	100	86.607	Ictidomys_tridecemlineatus
ENSUMAG00000005328	-	100	90.625	ENSSTOG00000008664	-	100	91.071	Ictidomys_tridecemlineatus
ENSUMAG00000005328	-	100	84.753	ENSJJAG00000001250	-	100	84.753	Jaculus_jaculus
ENSUMAG00000005328	-	100	92.377	ENSMICG00000038307	-	100	92.377	Microcebus_murinus
ENSUMAG00000005328	-	100	91.031	ENSMLUG00000014954	-	100	91.031	Myotis_lucifugus
ENSUMAG00000005328	-	100	85.714	ENSOGAG00000005560	-	100	85.268	Otolemur_garnettii
ENSUMAG00000005328	-	100	89.686	ENSOARG00000016291	-	100	89.686	Ovis_aries
ENSUMAG00000005328	-	92	72.170	ENSPPAG00000027053	-	99	72.642	Pan_paniscus
ENSUMAG00000005328	-	100	96.413	ENSPPRG00000006320	-	100	96.413	Panthera_pardus
ENSUMAG00000005328	-	100	96.413	ENSPTIG00000018989	-	100	96.413	Panthera_tigris_altaica
ENSUMAG00000005328	-	92	70.388	ENSPTRG00000045363	-	99	73.301	Pan_troglodytes
ENSUMAG00000005328	-	100	91.031	ENSPVAG00000008380	-	100	91.031	Pteropus_vampyrus
ENSUMAG00000005328	-	100	78.571	ENSRBIG00000024942	-	100	78.571	Rhinopithecus_bieti
ENSUMAG00000005328	-	100	73.214	ENSRROG00000030346	-	90	80.682	Rhinopithecus_roxellana
ENSUMAG00000005328	-	100	91.480	ENSSSCG00000026233	-	100	92.377	Sus_scrofa
ENSUMAG00000005328	-	100	94.619	ENSTTRG00000008060	POLR3G	100	94.619	Tursiops_truncatus
ENSUMAG00000005328	-	100	92.825	ENSVPAG00000009793	-	100	92.825	Vicugna_pacos
ENSUMAG00000005328	-	100	98.206	ENSVVUG00000022482	-	100	98.206	Vulpes_vulpes