EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000005442 (Gene tree)
Gene ID: 103672172
Gene Symbol: FAM172A
Alias: -
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 415415 bases
Position: chrKK498657.1:6909747-7325161
Accession: 103672172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000007024	Arb2	PF09757.9	1.1e-09	1	1
ENSUMAP00000007032	Arb2	PF09757.9	1.1e-09	1	1
ENSUMAP00000007014	Arb2	PF09757.9	1.3e-09	1	1
ENSUMAP00000006998	Arb2	PF09757.9	1.5e-09	1	1
ENSUMAP00000006993	Arb2	PF09757.9	1.6e-09	1	1
ENSUMAP00000007019	Arb2	PF09757.9	1.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000008397	FAM172A-201	1667	-	ENSUMAP00000006993	416 (aa)	XP_008699066	UPI0004E029E2
ENSUMAT00000008441	FAM172A-209	1595	-	ENSUMAP00000007032	378 (aa)	-	-
ENSUMAT00000008404	FAM172A-203	1426	-	ENSUMAP00000007000	401 (aa)	-	-
ENSUMAT00000008412	FAM172A-205	1794	-	ENSUMAP00000007007	406 (aa)	-	-
ENSUMAT00000008410	FAM172A-204	1756	-	ENSUMAP00000007006	420 (aa)	XP_008699063	UPI0004E01603
ENSUMAT00000008402	FAM172A-202	1441	-	ENSUMAP00000006998	406 (aa)	-	-
ENSUMAT00000008427	FAM172A-207	1721	-	ENSUMAP00000007019	420 (aa)	-	-
ENSUMAT00000008432	FAM172A-208	1725	-	ENSUMAP00000007024	375 (aa)	XP_008699069	UPI0004E0160D
ENSUMAT00000008421	FAM172A-206	1845	-	ENSUMAP00000007014	396 (aa)	XP_008699067	UPI0004E01DB7

Gene Model

Click here to download ENSUMAG00000005442's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000005442's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000005442	FAM172A	100	98.317	ENSG00000113391	FAM172A	100	98.734	Homo_sapiens
ENSUMAG00000005442	FAM172A	100	86.779	ENSAPLG00000004055	FAM172A	97	87.871	Anas_platyrhynchos
ENSUMAG00000005442	FAM172A	55	39.381	ENSAPLG00000011555	-	97	38.961	Anas_platyrhynchos
ENSUMAG00000005442	FAM172A	99	88.770	ENSACAG00000013305	FAM172A	95	89.344	Anolis_carolinensis
ENSUMAG00000005442	FAM172A	100	91.223	ENSANAG00000035869	FAM172A	94	100.000	Aotus_nancymaae
ENSUMAG00000005442	FAM172A	100	99.038	ENSBTAG00000050195	FAM172A	100	99.038	Bos_taurus
ENSUMAG00000005442	FAM172A	100	98.798	ENSCJAG00000010444	FAM172A	100	98.798	Callithrix_jacchus
ENSUMAG00000005442	FAM172A	99	99.730	ENSCAFG00000008064	FAM172A	100	99.730	Canis_familiaris
ENSUMAG00000005442	FAM172A	99	99.461	ENSCAFG00020006210	FAM172A	100	98.317	Canis_lupus_dingo
ENSUMAG00000005442	FAM172A	100	98.798	ENSCHIG00000008440	FAM172A	100	98.798	Capra_hircus
ENSUMAG00000005442	FAM172A	71	98.872	ENSTSYG00000006286	FAM172A	85	98.872	Carlito_syrichta
ENSUMAG00000005442	FAM172A	60	86.726	ENSCAPG00000014103	-	100	86.726	Cavia_aperea
ENSUMAG00000005442	FAM172A	100	98.317	ENSCCAG00000023116	FAM172A	100	98.378	Cebus_capucinus
ENSUMAG00000005442	FAM172A	99	96.486	ENSCLAG00000005472	FAM172A	100	98.734	Chinchilla_lanigera
ENSUMAG00000005442	FAM172A	85	45.317	ENSCPBG00000004402	-	96	43.631	Chrysemys_picta_bellii
ENSUMAG00000005442	FAM172A	72	97.407	ENSCANG00000040412	FAM172A	92	97.778	Colobus_angolensis_palliatus
ENSUMAG00000005442	FAM172A	100	99.279	ENSDNOG00000004689	FAM172A	100	99.279	Dasypus_novemcinctus
ENSUMAG00000005442	FAM172A	73	97.059	ENSDORG00000013558	Fam172a	92	94.366	Dipodomys_ordii
ENSUMAG00000005442	FAM172A	83	39.172	ENSEBUG00000016097	-	62	40.303	Eptatretus_burgeri
ENSUMAG00000005442	FAM172A	99	96.757	ENSECAG00000018274	FAM172A	99	96.765	Equus_caballus
ENSUMAG00000005442	FAM172A	100	86.298	ENSEEUG00000002887	FAM172A	100	86.298	Erinaceus_europaeus
ENSUMAG00000005442	FAM172A	98	69.024	ENSELUG00000017647	fam172a	96	69.287	Esox_lucius
ENSUMAG00000005442	FAM172A	100	99.519	ENSFCAG00000025443	FAM172A	100	99.519	Felis_catus
ENSUMAG00000005442	FAM172A	86	43.454	ENSFALG00000006501	-	100	43.454	Ficedula_albicollis
ENSUMAG00000005442	FAM172A	97	87.879	ENSFALG00000009072	FAM172A	97	88.858	Ficedula_albicollis
ENSUMAG00000005442	FAM172A	100	87.260	ENSGALG00000014661	FAM172A	97	88.861	Gallus_gallus
ENSUMAG00000005442	FAM172A	100	90.625	ENSGAGG00000003839	FAM172A	97	91.584	Gopherus_agassizii
ENSUMAG00000005442	FAM172A	86	44.068	ENSGAGG00000022828	-	93	45.042	Gopherus_agassizii
ENSUMAG00000005442	FAM172A	100	98.077	ENSGGOG00000010296	FAM172A	100	98.077	Gorilla_gorilla
ENSUMAG00000005442	FAM172A	99	96.765	ENSHGLG00000011178	FAM172A	100	97.468	Heterocephalus_glaber_female
ENSUMAG00000005442	FAM172A	98	97.290	ENSHGLG00100013340	FAM172A	100	97.468	Heterocephalus_glaber_male
ENSUMAG00000005442	FAM172A	100	98.558	ENSSTOG00000009918	FAM172A	100	98.558	Ictidomys_tridecemlineatus
ENSUMAG00000005442	FAM172A	88	49.096	ENSLACG00000001532	si:ch73-41e3.7	92	49.138	Latimeria_chalumnae
ENSUMAG00000005442	FAM172A	99	76.486	ENSLOCG00000001629	fam172a	97	76.543	Lepisosteus_oculatus
ENSUMAG00000005442	FAM172A	72	97.407	ENSMFAG00000001171	FAM172A	92	97.778	Macaca_fascicularis
ENSUMAG00000005442	FAM172A	94	97.468	ENSMNEG00000039938	FAM172A	92	97.778	Macaca_nemestrina
ENSUMAG00000005442	FAM172A	100	99.279	ENSMICG00000030403	FAM172A	100	99.279	Microcebus_murinus
ENSUMAG00000005442	FAM172A	89	95.135	ENSMOCG00000003613	Fam172a	100	95.135	Microtus_ochrogaster
ENSUMAG00000005442	FAM172A	100	90.625	ENSMODG00000020131	FAM172A	97	91.337	Monodelphis_domestica
ENSUMAG00000005442	FAM172A	75	96.203	MGP_PahariEiJ_G0015818	Fam172a	100	96.203	Mus_pahari
ENSUMAG00000005442	FAM172A	89	98.108	ENSNGAG00000019570	Fam172a	100	98.108	Nannospalax_galili
ENSUMAG00000005442	FAM172A	72	97.407	ENSNLEG00000013903	FAM172A	89	97.778	Nomascus_leucogenys
ENSUMAG00000005442	FAM172A	99	89.008	ENSOANG00000011068	FAM172A	98	90.137	Ornithorhynchus_anatinus
ENSUMAG00000005442	FAM172A	99	97.844	ENSOCUG00000007299	FAM172A	96	98.272	Oryctolagus_cuniculus
ENSUMAG00000005442	FAM172A	100	96.875	ENSOGAG00000015189	FAM172A	100	96.875	Otolemur_garnettii
ENSUMAG00000005442	FAM172A	99	98.396	ENSOARG00000016711	FAM172A	85	98.656	Ovis_aries
ENSUMAG00000005442	FAM172A	72	97.037	ENSPPAG00000030542	FAM172A	92	97.407	Pan_paniscus
ENSUMAG00000005442	FAM172A	100	99.519	ENSPPRG00000006653	FAM172A	100	99.519	Panthera_pardus
ENSUMAG00000005442	FAM172A	100	99.519	ENSPTIG00000012681	FAM172A	100	99.519	Panthera_tigris_altaica
ENSUMAG00000005442	FAM172A	72	97.037	ENSPTRG00000017074	FAM172A	92	97.407	Pan_troglodytes
ENSUMAG00000005442	FAM172A	72	97.407	ENSPANG00000011687	FAM172A	92	97.778	Papio_anubis
ENSUMAG00000005442	FAM172A	99	73.585	ENSPKIG00000012314	fam172a	96	83.516	Paramormyrops_kingsleyae
ENSUMAG00000005442	FAM172A	100	95.433	ENSPEMG00000009604	-	100	98.734	Peromyscus_maniculatus_bairdii
ENSUMAG00000005442	FAM172A	100	90.385	ENSPCIG00000028612	FAM172A	97	91.337	Phascolarctos_cinereus
ENSUMAG00000005442	FAM172A	56	99.563	ENSPCOG00000024072	FAM172A	93	99.563	Propithecus_coquereli
ENSUMAG00000005442	FAM172A	72	94.052	ENSRNOG00000013844	Fam172a	99	94.052	Rattus_norvegicus
ENSUMAG00000005442	FAM172A	53	77.130	ENSRBIG00000028680	-	78	93.182	Rhinopithecus_bieti
ENSUMAG00000005442	FAM172A	72	97.407	ENSRROG00000023807	FAM172A	92	97.778	Rhinopithecus_roxellana
ENSUMAG00000005442	FAM172A	100	98.558	ENSSBOG00000019860	FAM172A	100	98.558	Saimiri_boliviensis_boliviensis
ENSUMAG00000005442	FAM172A	100	90.144	ENSSHAG00000013743	FAM172A	97	90.842	Sarcophilus_harrisii
ENSUMAG00000005442	FAM172A	99	89.008	ENSSPUG00000008161	FAM172A	97	88.614	Sphenodon_punctatus
ENSUMAG00000005442	FAM172A	100	99.519	ENSSSCG00000027608	FAM172A	100	99.730	Sus_scrofa
ENSUMAG00000005442	FAM172A	91	87.105	ENSTGUG00000000715	FAM172A	100	87.105	Taeniopygia_guttata
ENSUMAG00000005442	FAM172A	82	47.923	ENSTGUG00000013623	-	100	46.726	Taeniopygia_guttata
ENSUMAG00000005442	FAM172A	87	56.970	ENSTNIG00000009902	fam172a	99	59.036	Tetraodon_nigroviridis
ENSUMAG00000005442	FAM172A	99	97.035	ENSTTRG00000001521	FAM172A	97	96.049	Tursiops_truncatus
ENSUMAG00000005442	FAM172A	100	99.471	ENSVVUG00000022112	FAM172A	100	99.471	Vulpes_vulpes
ENSUMAG00000005442	FAM172A	92	42.857	ENSXETG00000033027	-	100	42.857	Xenopus_tropicalis
ENSUMAG00000005442	FAM172A	98	81.707	ENSXETG00000011592	fam172a	96	81.773	Xenopus_tropicalis