EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000005997 (Gene tree)
Gene ID: 103676632
Gene Symbol: RBM28
Alias: -
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 30593 bases
Position: chrKK498719.1:10336007-10366599
Accession: 103676632
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000007777	RRM_1	PF00076.22	2.2e-56	1	3
ENSUMAP00000007777	RRM_1	PF00076.22	2.2e-56	2	3
ENSUMAP00000007777	RRM_1	PF00076.22	2.2e-56	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000009327	RBM28-201	3376	-	ENSUMAP00000007777	756 (aa)	XP_008704063	UPI0004E00CB7

Gene Model

Click here to download ENSUMAG00000005997's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000005997's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000005997	RBM28	100	84.888	ENSG00000106344	RBM28	100	85.283	Homo_sapiens
ENSUMAG00000005997	RBM28	57	53.261	ENSAPOG00000015512	rbm28	100	51.018	Acanthochromis_polyacanthus
ENSUMAG00000005997	RBM28	100	96.739	ENSAMEG00000004776	RBM28	90	96.739	Ailuropoda_melanoleuca
ENSUMAG00000005997	RBM28	55	55.189	ENSACIG00000023153	rbm28	100	51.042	Amphilophus_citrinellus
ENSUMAG00000005997	RBM28	57	56.364	ENSAOCG00000000462	rbm28	100	52.078	Amphiprion_ocellaris
ENSUMAG00000005997	RBM28	57	56.136	ENSAPEG00000012996	rbm28	64	54.582	Amphiprion_percula
ENSUMAG00000005997	RBM28	59	52.311	ENSATEG00000001672	rbm28	67	49.615	Anabas_testudineus
ENSUMAG00000005997	RBM28	100	85.317	ENSANAG00000033922	RBM28	100	85.053	Aotus_nancymaae
ENSUMAG00000005997	RBM28	100	49.621	ENSACLG00000025024	rbm28	100	51.421	Astatotilapia_calliptera
ENSUMAG00000005997	RBM28	58	57.045	ENSAMXG00000000763	rbm28	99	58.352	Astyanax_mexicanus
ENSUMAG00000005997	RBM28	100	86.111	ENSBTAG00000017001	RBM28	100	100.000	Bos_taurus
ENSUMAG00000005997	RBM28	100	83.202	ENSCJAG00000017731	RBM28	100	83.596	Callithrix_jacchus
ENSUMAG00000005997	RBM28	100	92.725	ENSCAFG00000001667	RBM28	100	92.593	Canis_familiaris
ENSUMAG00000005997	RBM28	100	92.725	ENSCAFG00020021648	RBM28	100	92.593	Canis_lupus_dingo
ENSUMAG00000005997	RBM28	100	85.714	ENSCHIG00000014146	RBM28	100	85.979	Capra_hircus
ENSUMAG00000005997	RBM28	100	83.508	ENSTSYG00000002892	RBM28	100	83.770	Carlito_syrichta
ENSUMAG00000005997	RBM28	83	60.413	ENSCAPG00000013218	RBM28	99	60.731	Cavia_aperea
ENSUMAG00000005997	RBM28	100	82.454	ENSCPOG00000006253	RBM28	100	82.454	Cavia_porcellus
ENSUMAG00000005997	RBM28	100	84.058	ENSCCAG00000035105	RBM28	100	84.585	Cebus_capucinus
ENSUMAG00000005997	RBM28	100	84.646	ENSCATG00000040497	RBM28	100	84.908	Cercocebus_atys
ENSUMAG00000005997	RBM28	100	79.497	ENSCLAG00000003707	RBM28	100	79.497	Chinchilla_lanigera
ENSUMAG00000005997	RBM28	100	84.980	ENSCSAG00000010161	RBM28	100	85.244	Chlorocebus_sabaeus
ENSUMAG00000005997	RBM28	57	87.903	ENSCHOG00000001994	-	63	87.903	Choloepus_hoffmanni
ENSUMAG00000005997	RBM28	63	54.869	ENSCPBG00000018088	RBM28	87	60.300	Chrysemys_picta_bellii
ENSUMAG00000005997	RBM28	90	85.551	ENSCANG00000038397	RBM28	100	86.122	Colobus_angolensis_palliatus
ENSUMAG00000005997	RBM28	66	82.294	ENSCGRG00001021278	Rbm28	63	82.294	Cricetulus_griseus_chok1gshd
ENSUMAG00000005997	RBM28	100	80.996	ENSCGRG00000005098	Rbm28	100	80.996	Cricetulus_griseus_crigri
ENSUMAG00000005997	RBM28	100	49.743	ENSCSEG00000004212	rbm28	100	49.746	Cynoglossus_semilaevis
ENSUMAG00000005997	RBM28	58	55.481	ENSCVAG00000010493	rbm28	99	49.687	Cyprinodon_variegatus
ENSUMAG00000005997	RBM28	100	85.224	ENSDNOG00000001124	RBM28	100	85.488	Dasypus_novemcinctus
ENSUMAG00000005997	RBM28	65	81.048	ENSDORG00000004184	Rbm28	97	81.250	Dipodomys_ordii
ENSUMAG00000005997	RBM28	69	38.374	FBgn0260456	CG4806	70	38.023	Drosophila_melanogaster
ENSUMAG00000005997	RBM28	100	72.536	ENSETEG00000007130	RBM28	99	73.062	Echinops_telfairi
ENSUMAG00000005997	RBM28	99	39.788	ENSEBUG00000004419	rbm28	98	39.815	Eptatretus_burgeri
ENSUMAG00000005997	RBM28	100	88.136	ENSEASG00005008528	RBM28	100	88.005	Equus_asinus_asinus
ENSUMAG00000005997	RBM28	100	87.500	ENSECAG00000007745	RBM28	100	87.630	Equus_caballus
ENSUMAG00000005997	RBM28	100	76.278	ENSEEUG00000002389	RBM28	100	76.671	Erinaceus_europaeus
ENSUMAG00000005997	RBM28	100	52.837	ENSELUG00000020602	rbm28	100	52.711	Esox_lucius
ENSUMAG00000005997	RBM28	100	90.608	ENSFCAG00000000946	RBM28	100	100.000	Felis_catus
ENSUMAG00000005997	RBM28	100	83.862	ENSFDAG00000010169	RBM28	100	83.399	Fukomys_damarensis
ENSUMAG00000005997	RBM28	84	55.556	ENSGMOG00000007091	rbm28	73	48.748	Gadus_morhua
ENSUMAG00000005997	RBM28	58	55.257	ENSGAFG00000004802	rbm28	98	55.629	Gambusia_affinis
ENSUMAG00000005997	RBM28	57	56.322	ENSGACG00000012612	rbm28	100	47.059	Gasterosteus_aculeatus
ENSUMAG00000005997	RBM28	76	79.121	ENSGAGG00000008873	RBM28	93	79.121	Gopherus_agassizii
ENSUMAG00000005997	RBM28	95	84.050	ENSGGOG00000004644	RBM28	97	84.327	Gorilla_gorilla
ENSUMAG00000005997	RBM28	91	51.576	ENSHBUG00000009611	rbm28	57	56.086	Haplochromis_burtoni
ENSUMAG00000005997	RBM28	100	83.136	ENSHGLG00000005409	RBM28	100	83.136	Heterocephalus_glaber_female
ENSUMAG00000005997	RBM28	100	83.069	ENSHGLG00100016458	RBM28	100	82.407	Heterocephalus_glaber_male
ENSUMAG00000005997	RBM28	99	42.085	ENSHCOG00000010597	rbm28	99	44.874	Hippocampus_comes
ENSUMAG00000005997	RBM28	67	42.745	ENSIPUG00000007103	rbm28	92	46.170	Ictalurus_punctatus
ENSUMAG00000005997	RBM28	100	82.898	ENSSTOG00000002169	RBM28	100	83.290	Ictidomys_tridecemlineatus
ENSUMAG00000005997	RBM28	100	75.395	ENSJJAG00000022400	Rbm28	100	75.789	Jaculus_jaculus
ENSUMAG00000005997	RBM28	58	54.586	ENSKMAG00000013348	rbm28	99	49.871	Kryptolebias_marmoratus
ENSUMAG00000005997	RBM28	58	56.347	ENSLBEG00000012998	rbm28	100	49.936	Labrus_bergylta
ENSUMAG00000005997	RBM28	74	57.143	ENSLACG00000010485	-	100	56.846	Latimeria_chalumnae
ENSUMAG00000005997	RBM28	91	64.433	ENSLOCG00000015541	rbm28	80	63.918	Lepisosteus_oculatus
ENSUMAG00000005997	RBM28	100	83.466	ENSLAFG00000010717	RBM28	100	83.466	Loxodonta_africana
ENSUMAG00000005997	RBM28	100	84.777	ENSMFAG00000031036	RBM28	100	85.039	Macaca_fascicularis
ENSUMAG00000005997	RBM28	100	84.666	ENSMMUG00000007250	RBM28	100	84.928	Macaca_mulatta
ENSUMAG00000005997	RBM28	100	85.073	ENSMNEG00000036970	RBM28	100	85.073	Macaca_nemestrina
ENSUMAG00000005997	RBM28	84	84.681	ENSMLEG00000037717	RBM28	100	85.106	Mandrillus_leucophaeus
ENSUMAG00000005997	RBM28	100	50.380	ENSMAMG00000008525	rbm28	100	51.535	Mastacembelus_armatus
ENSUMAG00000005997	RBM28	93	49.044	ENSMZEG00005019625	rbm28	100	50.488	Maylandia_zebra
ENSUMAG00000005997	RBM28	100	78.819	ENSMAUG00000002263	Rbm28	100	78.819	Mesocricetus_auratus
ENSUMAG00000005997	RBM28	93	81.025	ENSMICG00000000107	RBM28	100	81.440	Microcebus_murinus
ENSUMAG00000005997	RBM28	100	80.607	ENSMOCG00000014615	Rbm28	100	80.475	Microtus_ochrogaster
ENSUMAG00000005997	RBM28	58	54.023	ENSMMOG00000008600	rbm28	99	51.335	Mola_mola
ENSUMAG00000005997	RBM28	100	73.168	ENSMODG00000015151	RBM28	100	74.316	Monodelphis_domestica
ENSUMAG00000005997	RBM28	58	53.725	ENSMALG00000006419	rbm28	100	48.500	Monopterus_albus
ENSUMAG00000005997	RBM28	100	80.053	MGP_CAROLIEiJ_G0028162	Rbm28	100	80.449	Mus_caroli
ENSUMAG00000005997	RBM28	100	80.317	ENSMUSG00000029701	Rbm28	100	80.317	Mus_musculus
ENSUMAG00000005997	RBM28	100	80.449	MGP_PahariEiJ_G0021920	Rbm28	100	80.317	Mus_pahari
ENSUMAG00000005997	RBM28	100	80.581	MGP_SPRETEiJ_G0029162	Rbm28	100	80.581	Mus_spretus
ENSUMAG00000005997	RBM28	100	93.140	ENSMPUG00000006511	RBM28	100	93.140	Mustela_putorius_furo
ENSUMAG00000005997	RBM28	100	85.171	ENSMLUG00000002186	RBM28	100	85.827	Myotis_lucifugus
ENSUMAG00000005997	RBM28	100	77.045	ENSNGAG00000017946	-	100	76.913	Nannospalax_galili
ENSUMAG00000005997	RBM28	100	79.762	ENSNGAG00000006480	-	100	79.365	Nannospalax_galili
ENSUMAG00000005997	RBM28	100	83.007	ENSNLEG00000012307	RBM28	100	100.000	Nomascus_leucogenys
ENSUMAG00000005997	RBM28	81	82.716	ENSMEUG00000009611	RBM28	91	82.716	Notamacropus_eugenii
ENSUMAG00000005997	RBM28	90	76.200	ENSOPRG00000015140	RBM28	90	75.624	Ochotona_princeps
ENSUMAG00000005997	RBM28	100	78.571	ENSODEG00000003213	-	100	78.836	Octodon_degus
ENSUMAG00000005997	RBM28	76	87.848	ENSODEG00000013217	-	83	87.848	Octodon_degus
ENSUMAG00000005997	RBM28	58	53.642	ENSONIG00000014924	rbm28	100	50.773	Oreochromis_niloticus
ENSUMAG00000005997	RBM28	100	63.247	ENSOANG00000000815	-	100	64.759	Ornithorhynchus_anatinus
ENSUMAG00000005997	RBM28	100	80.859	ENSOCUG00000003009	RBM28	100	81.380	Oryctolagus_cuniculus
ENSUMAG00000005997	RBM28	99	49.811	ENSORLG00000009636	rbm28	64	53.550	Oryzias_latipes
ENSUMAG00000005997	RBM28	58	56.222	ENSORLG00020002123	rbm28	99	52.288	Oryzias_latipes_hni
ENSUMAG00000005997	RBM28	99	60.194	ENSORLG00015015030	rbm28	98	60.194	Oryzias_latipes_hsok
ENSUMAG00000005997	RBM28	58	57.965	ENSOMEG00000007801	rbm28	100	53.178	Oryzias_melastigma
ENSUMAG00000005997	RBM28	95	92.500	ENSOGAG00000006011	RBM28	100	92.500	Otolemur_garnettii
ENSUMAG00000005997	RBM28	100	85.507	ENSOARG00000002547	RBM28	100	85.639	Ovis_aries
ENSUMAG00000005997	RBM28	100	84.535	ENSPPAG00000041730	RBM28	100	84.928	Pan_paniscus
ENSUMAG00000005997	RBM28	100	90.092	ENSPPRG00000004420	RBM28	100	100.000	Panthera_pardus
ENSUMAG00000005997	RBM28	100	90.476	ENSPTIG00000008550	RBM28	100	100.000	Panthera_tigris_altaica
ENSUMAG00000005997	RBM28	100	84.666	ENSPTRG00000019659	RBM28	100	85.059	Pan_troglodytes
ENSUMAG00000005997	RBM28	100	84.666	ENSPANG00000022295	RBM28	100	84.928	Papio_anubis
ENSUMAG00000005997	RBM28	99	51.493	ENSPKIG00000023453	rbm28	99	50.062	Paramormyrops_kingsleyae
ENSUMAG00000005997	RBM28	100	78.468	ENSPEMG00000020673	Rbm28	100	78.468	Peromyscus_maniculatus_bairdii
ENSUMAG00000005997	RBM28	100	71.765	ENSPCIG00000012810	RBM28	100	72.621	Phascolarctos_cinereus
ENSUMAG00000005997	RBM28	58	55.928	ENSPFOG00000018209	rbm28	100	49.116	Poecilia_formosa
ENSUMAG00000005997	RBM28	57	54.607	ENSPLAG00000016078	rbm28	96	48.649	Poecilia_latipinna
ENSUMAG00000005997	RBM28	58	55.556	ENSPMEG00000004292	rbm28	100	48.931	Poecilia_mexicana
ENSUMAG00000005997	RBM28	56	54.943	ENSPREG00000014287	rbm28	98	48.691	Poecilia_reticulata
ENSUMAG00000005997	RBM28	100	85.112	ENSPPYG00000017975	RBM28	100	85.375	Pongo_abelii
ENSUMAG00000005997	RBM28	74	76.056	ENSPCAG00000008223	RBM28	83	75.956	Procavia_capensis
ENSUMAG00000005997	RBM28	100	82.943	ENSPCOG00000016797	RBM28	100	100.000	Propithecus_coquereli
ENSUMAG00000005997	RBM28	77	92.647	ENSPVAG00000005443	RBM28	77	92.647	Pteropus_vampyrus
ENSUMAG00000005997	RBM28	100	49.555	ENSPNYG00000014003	rbm28	100	51.362	Pundamilia_nyererei
ENSUMAG00000005997	RBM28	100	78.996	ENSRNOG00000005468	Rbm28	100	78.996	Rattus_norvegicus
ENSUMAG00000005997	RBM28	100	84.293	ENSRBIG00000033990	RBM28	100	100.000	Rhinopithecus_bieti
ENSUMAG00000005997	RBM28	100	84.404	ENSRROG00000040747	RBM28	100	100.000	Rhinopithecus_roxellana
ENSUMAG00000005997	RBM28	85	79.581	ENSSBOG00000012308	RBM28	100	80.366	Saimiri_boliviensis_boliviensis
ENSUMAG00000005997	RBM28	96	68.579	ENSSHAG00000017017	RBM28	99	67.160	Sarcophilus_harrisii
ENSUMAG00000005997	RBM28	59	53.468	ENSSMAG00000003885	rbm28	99	50.304	Scophthalmus_maximus
ENSUMAG00000005997	RBM28	58	55.973	ENSSLDG00000020099	rbm28	100	49.808	Seriola_lalandi_dorsalis
ENSUMAG00000005997	RBM28	76	86.667	ENSSARG00000008303	RBM28	81	86.667	Sorex_araneus
ENSUMAG00000005997	RBM28	66	73.529	ENSSPUG00000000838	RBM28	80	73.529	Sphenodon_punctatus
ENSUMAG00000005997	RBM28	57	53.187	ENSSPAG00000023305	rbm28	100	49.399	Stegastes_partitus
ENSUMAG00000005997	RBM28	100	88.228	ENSSSCG00000031847	RBM28	100	88.228	Sus_scrofa
ENSUMAG00000005997	RBM28	59	54.267	ENSTRUG00000013311	rbm28	99	48.875	Takifugu_rubripes
ENSUMAG00000005997	RBM28	99	52.381	ENSTNIG00000017962	rbm28	99	50.973	Tetraodon_nigroviridis
ENSUMAG00000005997	RBM28	86	85.207	ENSTBEG00000012749	RBM28	86	85.207	Tupaia_belangeri
ENSUMAG00000005997	RBM28	100	84.079	ENSTTRG00000013647	RBM28	100	84.211	Tursiops_truncatus
ENSUMAG00000005997	RBM28	100	91.700	ENSUAMG00000006949	RBM28	100	91.173	Ursus_americanus
ENSUMAG00000005997	RBM28	85	80.685	ENSVPAG00000008304	RBM28	86	80.556	Vicugna_pacos
ENSUMAG00000005997	RBM28	100	92.725	ENSVVUG00000007270	RBM28	100	92.196	Vulpes_vulpes
ENSUMAG00000005997	RBM28	99	55.784	ENSXETG00000009271	rbm28	99	56.298	Xenopus_tropicalis
ENSUMAG00000005997	RBM28	58	53.759	ENSXCOG00000020357	rbm28	99	52.000	Xiphophorus_couchianus
ENSUMAG00000005997	RBM28	58	53.950	ENSXMAG00000004415	rbm28	100	48.408	Xiphophorus_maculatus