EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000006027 (Gene tree)
Gene ID: 103682140
Gene Symbol: TRMT1
Alias: -
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 7050 bases
Position: chrKK499510.1:1551726-1558775
Accession: 103682140
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000007823	zf-CCCH	PF00642.24	4.9e-06	1	1
ENSUMAP00000007823	TRM	PF02005.16	1.7e-146	1	1
ENSUMAP00000007823	Met_10	PF02475.16	5.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000009383	TRMT1-201	2047	XM_008711729	ENSUMAP00000007823	637 (aa)	XP_008709951	UPI0004E017CD

Gene Model

Click here to download ENSUMAG00000006027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000006027's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000006027	TRMT1	98	88.301	ENSG00000104907	TRMT1	100	93.717	Homo_sapiens
ENSUMAG00000006027	TRMT1	100	98.430	ENSAMEG00000012598	TRMT1	95	98.430	Ailuropoda_melanoleuca
ENSUMAG00000006027	TRMT1	90	59.233	ENSACIG00000018680	trmt1	88	59.233	Amphilophus_citrinellus
ENSUMAG00000006027	TRMT1	91	65.749	ENSAOCG00000006781	trmt1	86	65.749	Amphiprion_ocellaris
ENSUMAG00000006027	TRMT1	91	65.808	ENSAPEG00000007712	trmt1	86	65.808	Amphiprion_percula
ENSUMAG00000006027	TRMT1	91	67.235	ENSATEG00000001872	trmt1	86	67.235	Anabas_testudineus
ENSUMAG00000006027	TRMT1	94	65.512	ENSACAG00000003825	TRMT1	97	65.512	Anolis_carolinensis
ENSUMAG00000006027	TRMT1	99	83.703	ENSANAG00000023016	TRMT1	99	85.275	Aotus_nancymaae
ENSUMAG00000006027	TRMT1	90	64.983	ENSACLG00000010073	trmt1	92	64.983	Astatotilapia_calliptera
ENSUMAG00000006027	TRMT1	90	67.882	ENSAMXG00000012026	trmt1	85	67.882	Astyanax_mexicanus
ENSUMAG00000006027	TRMT1	100	89.168	ENSBTAG00000019325	TRMT1	91	89.168	Bos_taurus
ENSUMAG00000006027	TRMT1	81	40.530	WBGene00006613	trm-1	94	40.530	Caenorhabditis_elegans
ENSUMAG00000006027	TRMT1	99	82.780	ENSCJAG00000004566	TRMT1	97	82.780	Callithrix_jacchus
ENSUMAG00000006027	TRMT1	100	94.505	ENSCAFG00000017070	TRMT1	100	94.505	Canis_familiaris
ENSUMAG00000006027	TRMT1	99	92.846	ENSCAFG00020005397	TRMT1	98	90.723	Canis_lupus_dingo
ENSUMAG00000006027	TRMT1	100	88.715	ENSCHIG00000013569	TRMT1	96	88.715	Capra_hircus
ENSUMAG00000006027	TRMT1	98	81.949	ENSTSYG00000003207	TRMT1	97	81.847	Carlito_syrichta
ENSUMAG00000006027	TRMT1	88	79.893	ENSCAPG00000003355	TRMT1	98	79.893	Cavia_aperea
ENSUMAG00000006027	TRMT1	99	83.121	ENSCPOG00000011754	TRMT1	95	83.121	Cavia_porcellus
ENSUMAG00000006027	TRMT1	97	84.279	ENSCCAG00000022263	TRMT1	99	84.279	Cebus_capucinus
ENSUMAG00000006027	TRMT1	100	87.755	ENSCATG00000039850	TRMT1	96	87.755	Cercocebus_atys
ENSUMAG00000006027	TRMT1	87	72.939	ENSCATG00000038220	-	98	72.939	Cercocebus_atys
ENSUMAG00000006027	TRMT1	98	85.897	ENSCLAG00000015295	TRMT1	97	81.847	Chinchilla_lanigera
ENSUMAG00000006027	TRMT1	79	89.307	ENSCSAG00000006500	TRMT1	95	89.307	Chlorocebus_sabaeus
ENSUMAG00000006027	TRMT1	97	66.772	ENSCPBG00000023866	TRMT1	93	66.928	Chrysemys_picta_bellii
ENSUMAG00000006027	TRMT1	86	46.004	ENSCING00000002884	-	96	46.004	Ciona_intestinalis
ENSUMAG00000006027	TRMT1	86	45.848	ENSCSAVG00000010927	-	100	45.203	Ciona_savignyi
ENSUMAG00000006027	TRMT1	100	71.317	ENSCANG00000040631	TRMT1	97	71.317	Colobus_angolensis_palliatus
ENSUMAG00000006027	TRMT1	95	68.257	ENSCANG00000031650	-	96	68.438	Colobus_angolensis_palliatus
ENSUMAG00000006027	TRMT1	99	83.861	ENSCGRG00001022594	Trmt1	96	83.861	Cricetulus_griseus_chok1gshd
ENSUMAG00000006027	TRMT1	99	83.861	ENSCGRG00000017732	Trmt1	95	83.861	Cricetulus_griseus_crigri
ENSUMAG00000006027	TRMT1	91	65.695	ENSCSEG00000001643	trmt1	84	68.093	Cynoglossus_semilaevis
ENSUMAG00000006027	TRMT1	91	66.609	ENSCVAG00000011886	trmt1	86	66.609	Cyprinodon_variegatus
ENSUMAG00000006027	TRMT1	90	65.404	ENSDARG00000010978	trmt1	85	65.404	Danio_rerio
ENSUMAG00000006027	TRMT1	87	61.964	ENSDNOG00000048240	-	95	61.964	Dasypus_novemcinctus
ENSUMAG00000006027	TRMT1	98	82.456	ENSDORG00000014298	Trmt1	95	82.456	Dipodomys_ordii
ENSUMAG00000006027	TRMT1	82	47.736	FBgn0032430	CG6388	89	47.736	Drosophila_melanogaster
ENSUMAG00000006027	TRMT1	54	85.075	ENSETEG00000015483	-	52	85.075	Echinops_telfairi
ENSUMAG00000006027	TRMT1	81	54.386	ENSEBUG00000003449	trmt1	76	54.008	Eptatretus_burgeri
ENSUMAG00000006027	TRMT1	98	87.660	ENSEASG00005004050	TRMT1	100	87.598	Equus_asinus_asinus
ENSUMAG00000006027	TRMT1	98	87.981	ENSECAG00000016149	TRMT1	100	87.912	Equus_caballus
ENSUMAG00000006027	TRMT1	52	86.853	ENSEEUG00000014102	-	84	86.853	Erinaceus_europaeus
ENSUMAG00000006027	TRMT1	90	65.278	ENSELUG00000021659	trmt1	85	65.278	Esox_lucius
ENSUMAG00000006027	TRMT1	100	93.093	ENSFCAG00000000483	TRMT1	97	93.093	Felis_catus
ENSUMAG00000006027	TRMT1	99	82.418	ENSFDAG00000007386	TRMT1	96	82.418	Fukomys_damarensis
ENSUMAG00000006027	TRMT1	91	64.103	ENSFHEG00000012865	trmt1	90	67.037	Fundulus_heteroclitus
ENSUMAG00000006027	TRMT1	90	60.245	ENSGMOG00000006564	trmt1	98	60.771	Gadus_morhua
ENSUMAG00000006027	TRMT1	91	67.414	ENSGAFG00000011862	trmt1	89	67.814	Gambusia_affinis
ENSUMAG00000006027	TRMT1	93	62.207	ENSGACG00000000227	trmt1	96	62.207	Gasterosteus_aculeatus
ENSUMAG00000006027	TRMT1	95	68.144	ENSGAGG00000016432	TRMT1	88	68.144	Gopherus_agassizii
ENSUMAG00000006027	TRMT1	98	88.622	ENSGGOG00000014007	TRMT1	97	88.383	Gorilla_gorilla
ENSUMAG00000006027	TRMT1	89	57.343	ENSHBUG00000008821	trmt1	94	57.343	Haplochromis_burtoni
ENSUMAG00000006027	TRMT1	99	83.728	ENSHGLG00000015972	TRMT1	96	83.728	Heterocephalus_glaber_female
ENSUMAG00000006027	TRMT1	99	77.129	ENSHGLG00100018112	TRMT1	97	77.129	Heterocephalus_glaber_male
ENSUMAG00000006027	TRMT1	90	63.398	ENSHCOG00000009447	trmt1	88	63.398	Hippocampus_comes
ENSUMAG00000006027	TRMT1	91	65.424	ENSIPUG00000002899	trmt1	85	65.424	Ictalurus_punctatus
ENSUMAG00000006027	TRMT1	100	86.364	ENSSTOG00000012531	TRMT1	98	86.364	Ictidomys_tridecemlineatus
ENSUMAG00000006027	TRMT1	93	85.160	ENSJJAG00000017154	Trmt1	95	83.121	Jaculus_jaculus
ENSUMAG00000006027	TRMT1	90	67.250	ENSKMAG00000011809	trmt1	98	64.805	Kryptolebias_marmoratus
ENSUMAG00000006027	TRMT1	90	67.250	ENSLBEG00000012703	trmt1	84	67.250	Labrus_bergylta
ENSUMAG00000006027	TRMT1	90	57.241	ENSLACG00000014585	TRMT1	99	55.250	Latimeria_chalumnae
ENSUMAG00000006027	TRMT1	90	62.069	ENSLOCG00000006479	trmt1	97	62.241	Lepisosteus_oculatus
ENSUMAG00000006027	TRMT1	98	87.081	ENSLAFG00000014072	TRMT1	97	87.081	Loxodonta_africana
ENSUMAG00000006027	TRMT1	100	87.912	ENSMFAG00000033143	TRMT1	96	87.912	Macaca_fascicularis
ENSUMAG00000006027	TRMT1	100	81.406	ENSMMUG00000001167	TRMT1	97	81.406	Macaca_mulatta
ENSUMAG00000006027	TRMT1	100	87.755	ENSMNEG00000037867	TRMT1	96	87.755	Macaca_nemestrina
ENSUMAG00000006027	TRMT1	100	87.284	ENSMLEG00000016142	TRMT1	97	87.284	Mandrillus_leucophaeus
ENSUMAG00000006027	TRMT1	90	67.483	ENSMAMG00000004357	trmt1	85	67.483	Mastacembelus_armatus
ENSUMAG00000006027	TRMT1	90	64.983	ENSMZEG00005014510	trmt1	85	64.983	Maylandia_zebra
ENSUMAG00000006027	TRMT1	98	83.360	ENSMAUG00000011134	Trmt1	96	82.527	Mesocricetus_auratus
ENSUMAG00000006027	TRMT1	99	88.365	ENSMICG00000000793	TRMT1	96	88.365	Microcebus_murinus
ENSUMAG00000006027	TRMT1	97	84.058	ENSMOCG00000015895	Trmt1	96	83.333	Microtus_ochrogaster
ENSUMAG00000006027	TRMT1	90	66.900	ENSMMOG00000011097	trmt1	92	66.900	Mola_mola
ENSUMAG00000006027	TRMT1	96	75.566	ENSMODG00000011619	TRMT1	99	75.566	Monodelphis_domestica
ENSUMAG00000006027	TRMT1	100	83.151	MGP_CAROLIEiJ_G0031304	Trmt1	100	84.791	Mus_caroli
ENSUMAG00000006027	TRMT1	100	82.839	ENSMUSG00000001909	Trmt1	100	83.650	Mus_musculus
ENSUMAG00000006027	TRMT1	100	82.839	MGP_SPRETEiJ_G0032422	Trmt1	100	83.650	Mus_spretus
ENSUMAG00000006027	TRMT1	100	94.819	ENSMPUG00000004210	TRMT1	91	94.819	Mustela_putorius_furo
ENSUMAG00000006027	TRMT1	100	88.697	ENSMLUG00000012809	TRMT1	95	88.697	Myotis_lucifugus
ENSUMAG00000006027	TRMT1	99	83.333	ENSNGAG00000022486	Trmt1	95	83.333	Nannospalax_galili
ENSUMAG00000006027	TRMT1	78	67.953	ENSNBRG00000024376	trmt1	85	67.953	Neolamprologus_brichardi
ENSUMAG00000006027	TRMT1	79	88.162	ENSNLEG00000013019	-	96	88.162	Nomascus_leucogenys
ENSUMAG00000006027	TRMT1	93	75.042	ENSMEUG00000013756	TRMT1	99	75.042	Notamacropus_eugenii
ENSUMAG00000006027	TRMT1	82	84.944	ENSOPRG00000009471	-	78	84.944	Ochotona_princeps
ENSUMAG00000006027	TRMT1	98	84.848	ENSODEG00000010323	TRMT1	95	84.848	Octodon_degus
ENSUMAG00000006027	TRMT1	93	65.886	ENSONIG00000000400	trmt1	95	65.886	Oreochromis_niloticus
ENSUMAG00000006027	TRMT1	79	89.505	ENSOCUG00000021934	TRMT1	95	89.505	Oryctolagus_cuniculus
ENSUMAG00000006027	TRMT1	91	61.993	ENSORLG00000020074	trmt1	92	61.993	Oryzias_latipes
ENSUMAG00000006027	TRMT1	91	64.948	ENSORLG00020007561	trmt1	91	64.777	Oryzias_latipes_hni
ENSUMAG00000006027	TRMT1	91	65.292	ENSORLG00015006547	trmt1	88	65.292	Oryzias_latipes_hsok
ENSUMAG00000006027	TRMT1	90	65.674	ENSOMEG00000019343	trmt1	86	65.674	Oryzias_melastigma
ENSUMAG00000006027	TRMT1	97	85.737	ENSOGAG00000025576	TRMT1	97	85.737	Otolemur_garnettii
ENSUMAG00000006027	TRMT1	100	72.699	ENSOARG00000009397	TRMT1	90	73.011	Ovis_aries
ENSUMAG00000006027	TRMT1	100	84.615	ENSPPRG00000012117	TRMT1	98	84.615	Panthera_pardus
ENSUMAG00000006027	TRMT1	78	96.203	ENSPTIG00000008833	TRMT1	94	96.203	Panthera_tigris_altaica
ENSUMAG00000006027	TRMT1	99	68.095	ENSPTRG00000050421	-	96	68.095	Pan_troglodytes
ENSUMAG00000006027	TRMT1	98	88.301	ENSPTRG00000010557	TRMT1	97	88.069	Pan_troglodytes
ENSUMAG00000006027	TRMT1	100	87.912	ENSPANG00000009247	TRMT1	96	87.912	Papio_anubis
ENSUMAG00000006027	TRMT1	88	72.803	ENSPANG00000034058	-	96	72.803	Papio_anubis
ENSUMAG00000006027	TRMT1	91	66.438	ENSPKIG00000005309	trmt1	85	66.438	Paramormyrops_kingsleyae
ENSUMAG00000006027	TRMT1	86	61.172	ENSPSIG00000008762	TRMT1	79	61.172	Pelodiscus_sinensis
ENSUMAG00000006027	TRMT1	90	65.035	ENSPMGG00000019764	trmt1	90	65.035	Periophthalmus_magnuspinnatus
ENSUMAG00000006027	TRMT1	97	85.323	ENSPEMG00000016247	Trmt1	96	83.931	Peromyscus_maniculatus_bairdii
ENSUMAG00000006027	TRMT1	93	58.037	ENSPMAG00000004329	trmt1	92	58.037	Petromyzon_marinus
ENSUMAG00000006027	TRMT1	95	74.959	ENSPCIG00000019273	TRMT1	93	74.959	Phascolarctos_cinereus
ENSUMAG00000006027	TRMT1	90	68.815	ENSPFOG00000008527	trmt1	88	68.815	Poecilia_formosa
ENSUMAG00000006027	TRMT1	90	68.641	ENSPLAG00000018788	trmt1	87	71.180	Poecilia_latipinna
ENSUMAG00000006027	TRMT1	90	68.881	ENSPMEG00000013120	trmt1	88	68.881	Poecilia_mexicana
ENSUMAG00000006027	TRMT1	90	68.174	ENSPREG00000000211	trmt1	85	68.576	Poecilia_reticulata
ENSUMAG00000006027	TRMT1	98	88.301	ENSPPYG00000009622	TRMT1	97	88.069	Pongo_abelii
ENSUMAG00000006027	TRMT1	99	79.683	ENSPCAG00000003698	TRMT1	96	79.683	Procavia_capensis
ENSUMAG00000006027	TRMT1	99	88.050	ENSPCOG00000008653	TRMT1	97	88.050	Propithecus_coquereli
ENSUMAG00000006027	TRMT1	100	90.110	ENSPVAG00000015076	TRMT1	97	90.110	Pteropus_vampyrus
ENSUMAG00000006027	TRMT1	90	63.240	ENSPNYG00000013960	trmt1	92	63.240	Pundamilia_nyererei
ENSUMAG00000006027	TRMT1	84	68.476	ENSPNAG00000024859	trmt1	88	68.476	Pygocentrus_nattereri
ENSUMAG00000006027	TRMT1	100	83.619	ENSRNOG00000002914	Trmt1	100	83.619	Rattus_norvegicus
ENSUMAG00000006027	TRMT1	95	68.852	ENSRBIG00000037505	-	97	69.021	Rhinopithecus_bieti
ENSUMAG00000006027	TRMT1	100	87.441	ENSRBIG00000038324	TRMT1	96	87.441	Rhinopithecus_bieti
ENSUMAG00000006027	TRMT1	100	87.284	ENSRROG00000028599	TRMT1	96	87.284	Rhinopithecus_roxellana
ENSUMAG00000006027	TRMT1	95	68.033	ENSRROG00000031847	-	96	68.218	Rhinopithecus_roxellana
ENSUMAG00000006027	TRMT1	80	36.754	YDR120C	-	92	37.009	Saccharomyces_cerevisiae
ENSUMAG00000006027	TRMT1	100	82.104	ENSSBOG00000028861	TRMT1	99	83.955	Saimiri_boliviensis_boliviensis
ENSUMAG00000006027	TRMT1	92	77.342	ENSSHAG00000014381	TRMT1	97	75.993	Sarcophilus_harrisii
ENSUMAG00000006027	TRMT1	91	67.358	ENSSFOG00015004139	trmt1	85	67.358	Scleropages_formosus
ENSUMAG00000006027	TRMT1	91	67.350	ENSSMAG00000021136	trmt1	87	67.350	Scophthalmus_maximus
ENSUMAG00000006027	TRMT1	90	67.133	ENSSDUG00000012740	trmt1	84	67.133	Seriola_dumerili
ENSUMAG00000006027	TRMT1	90	66.783	ENSSLDG00000005971	trmt1	84	66.783	Seriola_lalandi_dorsalis
ENSUMAG00000006027	TRMT1	85	86.081	ENSSARG00000005138	TRMT1	96	86.081	Sorex_araneus
ENSUMAG00000006027	TRMT1	95	53.300	ENSSPUG00000001084	TRMT1	95	53.630	Sphenodon_punctatus
ENSUMAG00000006027	TRMT1	91	64.433	ENSSPAG00000007153	trmt1	95	64.433	Stegastes_partitus
ENSUMAG00000006027	TRMT1	100	90.125	ENSSSCG00000013744	TRMT1	100	90.125	Sus_scrofa
ENSUMAG00000006027	TRMT1	89	62.218	ENSTRUG00000010700	trmt1	86	62.371	Takifugu_rubripes
ENSUMAG00000006027	TRMT1	90	65.620	ENSTNIG00000018808	trmt1	98	65.620	Tetraodon_nigroviridis
ENSUMAG00000006027	TRMT1	100	86.813	ENSTTRG00000006379	TRMT1	97	86.813	Tursiops_truncatus
ENSUMAG00000006027	TRMT1	100	99.215	ENSUAMG00000022911	TRMT1	98	99.215	Ursus_americanus
ENSUMAG00000006027	TRMT1	100	94.192	ENSVVUG00000024177	TRMT1	96	94.192	Vulpes_vulpes
ENSUMAG00000006027	TRMT1	72	71.367	ENSXETG00000033863	TRMT1	92	71.367	Xenopus_tropicalis
ENSUMAG00000006027	TRMT1	90	67.826	ENSXCOG00000015733	trmt1	88	68.229	Xiphophorus_couchianus
ENSUMAG00000006027	TRMT1	90	67.474	ENSXMAG00000013823	trmt1	98	67.876	Xiphophorus_maculatus