EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000006227 (Gene tree)
Gene ID: 103671053
Gene Symbol: -
Alias: -
Full Name: mitochondrial ribosomal protein L23
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 6278 bases
Position: chrKK498651.1:1515964-1522241
Accession: 103671053
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000008121	Ribosomal_L23	PF00276.20	4.2e-13	1	1
ENSUMAP00000008119	Ribosomal_L23	PF00276.20	3.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000009712	-	834	-	ENSUMAP00000008121	181 (aa)	XP_008697842	UPI0004DFDCAF
ENSUMAT00000009710	-	914	-	ENSUMAP00000008119	227 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000006227's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000006227's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000006227	-	85	81.818	ENSG00000214026	MRPL23	100	81.818	Homo_sapiens
ENSUMAG00000006227	-	82	68.456	ENSAPOG00000013198	mrpl23	95	68.456	Acanthochromis_polyacanthus
ENSUMAG00000006227	-	85	94.156	ENSAMEG00000002153	-	100	94.156	Ailuropoda_melanoleuca
ENSUMAG00000006227	-	85	67.742	ENSACIG00000024327	mrpl23	100	67.742	Amphilophus_citrinellus
ENSUMAG00000006227	-	82	68.456	ENSAOCG00000013679	mrpl23	95	68.456	Amphiprion_ocellaris
ENSUMAG00000006227	-	82	68.456	ENSAPEG00000010298	mrpl23	95	68.456	Amphiprion_percula
ENSUMAG00000006227	-	85	65.584	ENSATEG00000019314	mrpl23	99	65.584	Anabas_testudineus
ENSUMAG00000006227	-	64	62.931	ENSAPLG00000012955	-	100	62.931	Anas_platyrhynchos
ENSUMAG00000006227	-	52	74.468	ENSACAG00000009700	-	99	74.468	Anolis_carolinensis
ENSUMAG00000006227	-	82	88.514	ENSANAG00000010507	-	97	88.514	Aotus_nancymaae
ENSUMAG00000006227	-	82	68.667	ENSACLG00000002565	mrpl23	95	68.456	Astatotilapia_calliptera
ENSUMAG00000006227	-	52	69.149	ENSAMXG00000016759	mrpl23	92	50.505	Astyanax_mexicanus
ENSUMAG00000006227	-	59	81.308	ENSBTAG00000000103	MRPL23	100	81.308	Bos_taurus
ENSUMAG00000006227	-	73	37.241	WBGene00020348	mrpl-23	91	37.241	Caenorhabditis_elegans
ENSUMAG00000006227	-	85	90.909	ENSCAFG00000010086	-	100	90.909	Canis_familiaris
ENSUMAG00000006227	-	85	90.909	ENSCAFG00020017439	-	100	90.909	Canis_lupus_dingo
ENSUMAG00000006227	-	85	85.065	ENSCHIG00000019224	-	100	85.065	Capra_hircus
ENSUMAG00000006227	-	82	82.432	ENSTSYG00000030664	-	97	82.432	Carlito_syrichta
ENSUMAG00000006227	-	82	68.919	ENSCAPG00000012400	-	100	68.919	Cavia_aperea
ENSUMAG00000006227	-	85	81.169	ENSCPOG00000035162	-	100	81.169	Cavia_porcellus
ENSUMAG00000006227	-	85	83.766	ENSCCAG00000021662	-	100	83.766	Cebus_capucinus
ENSUMAG00000006227	-	80	79.167	ENSCATG00000019817	-	88	79.167	Cercocebus_atys
ENSUMAG00000006227	-	85	82.468	ENSCATG00000037780	-	97	82.468	Cercocebus_atys
ENSUMAG00000006227	-	85	79.870	ENSCLAG00000015446	-	100	79.870	Chinchilla_lanigera
ENSUMAG00000006227	-	85	81.818	ENSCSAG00000009837	-	100	81.818	Chlorocebus_sabaeus
ENSUMAG00000006227	-	82	83.221	ENSCSAG00000019043	-	96	83.221	Chlorocebus_sabaeus
ENSUMAG00000006227	-	82	70.470	ENSCPBG00000007389	-	95	70.470	Chrysemys_picta_bellii
ENSUMAG00000006227	-	82	83.784	ENSCANG00000032318	-	100	83.784	Colobus_angolensis_palliatus
ENSUMAG00000006227	-	83	80.000	ENSCGRG00001000462	Mrpl23	100	77.922	Cricetulus_griseus_chok1gshd
ENSUMAG00000006227	-	83	80.000	ENSCGRG00000002207	Mrpl23	100	77.922	Cricetulus_griseus_crigri
ENSUMAG00000006227	-	82	63.758	ENSCSEG00000008738	mrpl23	99	63.758	Cynoglossus_semilaevis
ENSUMAG00000006227	-	82	67.114	ENSCVAG00000002822	mrpl23	95	67.114	Cyprinodon_variegatus
ENSUMAG00000006227	-	82	65.101	ENSDARG00000045696	mrpl23	96	65.101	Danio_rerio
ENSUMAG00000006227	-	85	66.013	ENSDNOG00000047306	-	99	66.013	Dasypus_novemcinctus
ENSUMAG00000006227	-	85	79.221	ENSDORG00000027504	Mrpl23	100	79.720	Dipodomys_ordii
ENSUMAG00000006227	-	82	43.421	FBgn0035335	mRpL23	97	43.421	Drosophila_melanogaster
ENSUMAG00000006227	-	83	87.333	ENSEASG00005000456	-	54	87.333	Equus_asinus_asinus
ENSUMAG00000006227	-	93	79.651	ENSECAG00000024486	-	59	82.558	Equus_caballus
ENSUMAG00000006227	-	83	63.816	ENSELUG00000022256	RM23	99	63.816	Esox_lucius
ENSUMAG00000006227	-	85	90.909	ENSFCAG00000018795	-	100	90.909	Felis_catus
ENSUMAG00000006227	-	81	69.178	ENSFALG00000011598	-	95	69.595	Ficedula_albicollis
ENSUMAG00000006227	-	85	80.519	ENSFDAG00000013606	-	100	80.519	Fukomys_damarensis
ENSUMAG00000006227	-	82	66.667	ENSFHEG00000010978	mrpl23	93	66.667	Fundulus_heteroclitus
ENSUMAG00000006227	-	81	62.329	ENSGMOG00000004509	mrpl23	100	62.329	Gadus_morhua
ENSUMAG00000006227	-	85	66.883	ENSGALG00000006561	-	71	66.883	Gallus_gallus
ENSUMAG00000006227	-	82	67.785	ENSGAFG00000021827	mrpl23	95	67.785	Gambusia_affinis
ENSUMAG00000006227	-	82	67.114	ENSGACG00000011130	mrpl23	95	67.114	Gasterosteus_aculeatus
ENSUMAG00000006227	-	82	69.799	ENSGAGG00000023827	-	95	69.799	Gopherus_agassizii
ENSUMAG00000006227	-	92	77.059	ENSGGOG00000000333	-	95	77.059	Gorilla_gorilla
ENSUMAG00000006227	-	82	67.785	ENSHBUG00000023397	mrpl23	95	67.785	Haplochromis_burtoni
ENSUMAG00000006227	-	84	80.921	ENSHGLG00000016722	-	100	79.221	Heterocephalus_glaber_female
ENSUMAG00000006227	-	85	79.221	ENSHGLG00100003075	-	100	79.221	Heterocephalus_glaber_male
ENSUMAG00000006227	-	84	65.359	ENSHCOG00000009092	mrpl23	95	66.443	Hippocampus_comes
ENSUMAG00000006227	-	82	67.114	ENSIPUG00000005383	mrpl23	96	67.114	Ictalurus_punctatus
ENSUMAG00000006227	-	85	79.221	ENSSTOG00000024573	-	100	79.221	Ictidomys_tridecemlineatus
ENSUMAG00000006227	-	85	81.169	ENSJJAG00000003519	Mrpl23	100	81.169	Jaculus_jaculus
ENSUMAG00000006227	-	82	64.667	ENSKMAG00000001599	mrpl23	95	64.430	Kryptolebias_marmoratus
ENSUMAG00000006227	-	82	67.114	ENSLBEG00000002580	mrpl23	95	67.114	Labrus_bergylta
ENSUMAG00000006227	-	85	65.806	ENSLACG00000011528	mrpl23	100	65.806	Latimeria_chalumnae
ENSUMAG00000006227	-	85	66.452	ENSLOCG00000001825	mrpl23	100	66.452	Lepisosteus_oculatus
ENSUMAG00000006227	-	85	81.818	ENSMFAG00000034529	-	100	81.818	Macaca_fascicularis
ENSUMAG00000006227	-	60	74.312	ENSMFAG00000039715	-	100	74.312	Macaca_fascicularis
ENSUMAG00000006227	-	85	82.468	ENSMMUG00000031268	MRPL23	100	82.468	Macaca_mulatta
ENSUMAG00000006227	-	85	80.519	ENSMNEG00000036690	-	100	80.519	Macaca_nemestrina
ENSUMAG00000006227	-	60	75.229	ENSMNEG00000033446	-	100	75.229	Macaca_nemestrina
ENSUMAG00000006227	-	85	81.818	ENSMLEG00000015767	-	100	83.108	Mandrillus_leucophaeus
ENSUMAG00000006227	-	82	68.456	ENSMAMG00000003609	mrpl23	95	68.456	Mastacembelus_armatus
ENSUMAG00000006227	-	82	68.456	ENSMZEG00005017456	mrpl23	95	68.456	Maylandia_zebra
ENSUMAG00000006227	-	82	66.892	ENSMGAG00000007978	-	97	66.892	Meleagris_gallopavo
ENSUMAG00000006227	-	82	80.405	ENSMAUG00000018693	Mrpl23	100	80.405	Mesocricetus_auratus
ENSUMAG00000006227	-	82	81.208	ENSMICG00000042091	-	95	81.208	Microcebus_murinus
ENSUMAG00000006227	-	85	79.870	ENSMOCG00000018436	Mrpl23	100	79.870	Microtus_ochrogaster
ENSUMAG00000006227	-	82	65.772	ENSMMOG00000018097	mrpl23	95	65.772	Mola_mola
ENSUMAG00000006227	-	85	77.273	ENSMODG00000003437	-	100	77.273	Monodelphis_domestica
ENSUMAG00000006227	-	82	67.785	ENSMALG00000014571	mrpl23	99	67.785	Monopterus_albus
ENSUMAG00000006227	-	85	78.571	MGP_CAROLIEiJ_G0030727	Mrpl23	100	78.571	Mus_caroli
ENSUMAG00000006227	-	85	76.774	ENSMUSG00000037772	Mrpl23	100	76.774	Mus_musculus
ENSUMAG00000006227	-	85	78.065	MGP_PahariEiJ_G0013923	Mrpl23	100	78.065	Mus_pahari
ENSUMAG00000006227	-	85	78.571	MGP_SPRETEiJ_G0031836	Mrpl23	100	78.571	Mus_spretus
ENSUMAG00000006227	-	82	90.066	ENSMPUG00000005658	-	97	90.728	Mustela_putorius_furo
ENSUMAG00000006227	-	85	81.818	ENSMPUG00000002923	-	99	81.818	Mustela_putorius_furo
ENSUMAG00000006227	-	85	78.571	ENSNGAG00000023444	-	100	80.405	Nannospalax_galili
ENSUMAG00000006227	-	65	85.470	ENSNGAG00000012877	-	95	80.000	Nannospalax_galili
ENSUMAG00000006227	-	82	68.456	ENSNBRG00000007183	mrpl23	95	68.456	Neolamprologus_brichardi
ENSUMAG00000006227	-	85	81.818	ENSNLEG00000026950	-	100	81.818	Nomascus_leucogenys
ENSUMAG00000006227	-	51	88.172	ENSOPRG00000018353	-	68	88.172	Ochotona_princeps
ENSUMAG00000006227	-	84	79.221	ENSODEG00000017262	-	99	79.221	Octodon_degus
ENSUMAG00000006227	-	85	69.032	ENSODEG00000012131	-	99	69.032	Octodon_degus
ENSUMAG00000006227	-	82	68.667	ENSONIG00000014500	mrpl23	93	68.667	Oreochromis_niloticus
ENSUMAG00000006227	-	81	67.568	ENSORLG00000025383	mrpl23	95	67.568	Oryzias_latipes
ENSUMAG00000006227	-	86	64.744	ENSORLG00020008379	mrpl23	100	64.744	Oryzias_latipes_hni
ENSUMAG00000006227	-	82	68.456	ENSOMEG00000019132	mrpl23	76	68.456	Oryzias_melastigma
ENSUMAG00000006227	-	85	79.870	ENSOGAG00000029988	-	100	79.870	Otolemur_garnettii
ENSUMAG00000006227	-	77	85.612	ENSOARG00000000706	-	86	85.612	Ovis_aries
ENSUMAG00000006227	-	85	82.468	ENSPPAG00000034414	-	100	82.468	Pan_paniscus
ENSUMAG00000006227	-	82	93.243	ENSPPRG00000013232	-	97	93.243	Panthera_pardus
ENSUMAG00000006227	-	85	82.468	ENSPTRG00000033746	MRPL23	100	82.468	Pan_troglodytes
ENSUMAG00000006227	-	85	81.818	ENSPANG00000018813	-	100	81.818	Papio_anubis
ENSUMAG00000006227	-	85	62.987	ENSPKIG00000001102	mrpl23	100	62.987	Paramormyrops_kingsleyae
ENSUMAG00000006227	-	71	65.385	ENSPSIG00000012834	-	100	65.385	Pelodiscus_sinensis
ENSUMAG00000006227	-	79	62.500	ENSPMGG00000006407	mrpl23	96	62.500	Periophthalmus_magnuspinnatus
ENSUMAG00000006227	-	85	76.623	ENSPEMG00000018572	Mrpl23	100	77.273	Peromyscus_maniculatus_bairdii
ENSUMAG00000006227	-	85	58.442	ENSPMAG00000005259	mrpl23	100	58.442	Petromyzon_marinus
ENSUMAG00000006227	-	57	80.769	ENSPCIG00000027047	-	65	80.769	Phascolarctos_cinereus
ENSUMAG00000006227	-	82	67.114	ENSPFOG00000014159	mrpl23	95	67.114	Poecilia_formosa
ENSUMAG00000006227	-	82	67.114	ENSPLAG00000023456	mrpl23	96	67.114	Poecilia_latipinna
ENSUMAG00000006227	-	82	68.456	ENSPMEG00000012252	mrpl23	95	68.456	Poecilia_mexicana
ENSUMAG00000006227	-	82	67.114	ENSPREG00000019951	mrpl23	95	67.114	Poecilia_reticulata
ENSUMAG00000006227	-	85	82.468	ENSPPYG00000002918	-	100	82.468	Pongo_abelii
ENSUMAG00000006227	-	82	83.108	ENSPCOG00000026555	-	100	83.108	Propithecus_coquereli
ENSUMAG00000006227	-	66	75.000	ENSPVAG00000000331	-	82	75.000	Pteropus_vampyrus
ENSUMAG00000006227	-	82	68.456	ENSPNYG00000015541	mrpl23	95	68.456	Pundamilia_nyererei
ENSUMAG00000006227	-	82	65.101	ENSPNAG00000010548	mrpl23	96	65.101	Pygocentrus_nattereri
ENSUMAG00000006227	-	85	78.710	ENSRNOG00000020354	Mrpl23	100	78.710	Rattus_norvegicus
ENSUMAG00000006227	-	85	82.468	ENSRBIG00000041638	-	100	82.468	Rhinopithecus_bieti
ENSUMAG00000006227	-	82	84.459	ENSRROG00000004661	-	100	84.459	Rhinopithecus_roxellana
ENSUMAG00000006227	-	82	85.235	ENSSBOG00000025338	-	82	85.235	Saimiri_boliviensis_boliviensis
ENSUMAG00000006227	-	82	79.730	ENSSHAG00000002716	-	100	79.730	Sarcophilus_harrisii
ENSUMAG00000006227	-	85	64.935	ENSSFOG00015002519	mrpl23	100	64.935	Scleropages_formosus
ENSUMAG00000006227	-	83	64.052	ENSSMAG00000009264	mrpl23	96	64.052	Scophthalmus_maximus
ENSUMAG00000006227	-	82	68.243	ENSSDUG00000019634	mrpl23	99	68.243	Seriola_dumerili
ENSUMAG00000006227	-	82	68.243	ENSSLDG00000012055	mrpl23	95	68.243	Seriola_lalandi_dorsalis
ENSUMAG00000006227	-	82	69.128	ENSSPUG00000002656	-	96	69.128	Sphenodon_punctatus
ENSUMAG00000006227	-	82	68.000	ENSSPAG00000001601	mrpl23	100	68.000	Stegastes_partitus
ENSUMAG00000006227	-	85	79.870	ENSSSCG00000038364	-	100	79.870	Sus_scrofa
ENSUMAG00000006227	-	82	68.919	ENSTGUG00000009338	MRPL23	100	68.919	Taeniopygia_guttata
ENSUMAG00000006227	-	83	64.238	ENSTRUG00000009637	mrpl23	95	64.430	Takifugu_rubripes
ENSUMAG00000006227	-	51	67.742	ENSTNIG00000010463	mrpl23	100	67.742	Tetraodon_nigroviridis
ENSUMAG00000006227	-	64	80.870	ENSTTRG00000009281	-	56	93.548	Tursiops_truncatus
ENSUMAG00000006227	-	100	99.448	ENSUAMG00000020867	-	100	99.448	Ursus_americanus
ENSUMAG00000006227	-	90	87.037	ENSVVUG00000002581	-	90	81.250	Vulpes_vulpes
ENSUMAG00000006227	-	85	64.935	ENSXETG00000014017	mrpl23	100	64.935	Xenopus_tropicalis
ENSUMAG00000006227	-	82	57.047	ENSXCOG00000020628	mrpl23	97	56.667	Xiphophorus_couchianus
ENSUMAG00000006227	-	82	67.114	ENSXMAG00000015496	mrpl23	95	67.114	Xiphophorus_maculatus