EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000006416 (Gene tree)
Gene ID: 103680887
Gene Symbol: TRANK1
Alias: KIAA0342|LBA1
Full Name: tetratricopeptide repeat and ankyrin repeat containing 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 78885 bases
Position: chrKK498530.1:48102315-48181199
Accession: 29011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000008476	UvrD-helicase	PF00580.21	2.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000010111	TRANK1-201	8808	-	ENSUMAP00000008461	2935 (aa)	-	-
ENSUMAT00000010119	TRANK1-202	8886	-	ENSUMAP00000008469	2961 (aa)	-	-
ENSUMAT00000010126	TRANK1-203	4839	-	ENSUMAP00000008476	1612 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000006416's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000006416's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000006416	TRANK1	99	91.998	ENSCAFG00020001387	TRANK1	99	91.998	Canis_lupus_dingo
ENSUMAG00000006416	TRANK1	97	83.940	ENSTSYG00000025860	TRANK1	54	83.940	Carlito_syrichta
ENSUMAG00000006416	TRANK1	97	78.509	ENSCLAG00000003643	TRANK1	53	79.460	Chinchilla_lanigera
ENSUMAG00000006416	TRANK1	99	65.574	ENSCPBG00000013529	TRANK1	57	65.315	Chrysemys_picta_bellii
ENSUMAG00000006416	TRANK1	97	86.120	ENSCANG00000039915	TRANK1	54	86.498	Colobus_angolensis_palliatus
ENSUMAG00000006416	TRANK1	99	81.946	ENSDNOG00000003573	TRANK1	56	82.069	Dasypus_novemcinctus
ENSUMAG00000006416	TRANK1	99	85.558	ENSEASG00005007374	TRANK1	99	85.801	Equus_asinus_asinus
ENSUMAG00000006416	TRANK1	99	85.784	ENSECAG00000018264	TRANK1	55	85.784	Equus_caballus
ENSUMAG00000006416	TRANK1	99	59.400	ENSFALG00000002875	TRANK1	54	59.155	Ficedula_albicollis
ENSUMAG00000006416	TRANK1	99	60.723	ENSGALG00000037629	TRANK1	85	60.158	Gallus_gallus
ENSUMAG00000006416	TRANK1	82	66.617	ENSGAGG00000009012	TRANK1	50	66.152	Gopherus_agassizii
ENSUMAG00000006416	TRANK1	99	52.137	ENSLOCG00000004808	TRANK1	55	52.015	Lepisosteus_oculatus
ENSUMAG00000006416	TRANK1	97	60.467	ENSMGAG00000011934	TRANK1	54	60.468	Meleagris_gallopavo
ENSUMAG00000006416	TRANK1	97	84.485	ENSMLUG00000003537	TRANK1	55	84.611	Myotis_lucifugus
ENSUMAG00000006416	TRANK1	97	77.820	ENSODEG00000003882	TRANK1	52	78.769	Octodon_degus
ENSUMAG00000006416	TRANK1	99	63.587	ENSPSIG00000010217	TRANK1	55	63.647	Pelodiscus_sinensis
ENSUMAG00000006416	TRANK1	99	86.495	ENSRBIG00000012281	TRANK1	54	86.562	Rhinopithecus_bieti
ENSUMAG00000006416	TRANK1	97	86.246	ENSRROG00000044487	TRANK1	54	86.625	Rhinopithecus_roxellana
ENSUMAG00000006416	TRANK1	50	77.396	ENSSPUG00000015974	TRANK1	64	76.010	Sphenodon_punctatus
ENSUMAG00000006416	TRANK1	100	98.353	ENSUAMG00000027609	-	100	98.353	Ursus_americanus
ENSUMAG00000006416	TRANK1	99	91.631	ENSVVUG00000007788	TRANK1	99	91.631	Vulpes_vulpes