EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSUMAG00000006700 (Gene tree)
Gene ID
103671461
Gene Symbol
POLR1A
Alias
DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name
RNA polymerase I subunit A
Gene Type
protein_coding
Species
Ursus_maritimus
Status
putative
Strand
Minus strand
Length
77145 bases
Position
chrKK498653.1:39313566-39390710
Accession
17264
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSUMAP00000010284RNA_pol_Rpb1_5PF04998.171e-10311
ENSUMAP00000010355RNA_pol_Rpb1_5PF04998.171e-10311
ENSUMAP00000010247RNA_pol_Rpb1_5PF04998.171e-10311
ENSUMAP00000010230RNA_pol_Rpb1_5PF04998.171.1e-10311
ENSUMAP00000010171RNA_pol_Rpb1_5PF04998.171.2e-10311
ENSUMAP00000010397RNA_pol_Rpb1_4PF05000.171.9e-2511
ENSUMAP00000010171RNA_pol_Rpb1_4PF05000.172.2e-2511
ENSUMAP00000010355RNA_pol_Rpb1_4PF05000.172.2e-2511
ENSUMAP00000010284RNA_pol_Rpb1_4PF05000.172.3e-2511
ENSUMAP00000010230RNA_pol_Rpb1_4PF05000.172.4e-2511
ENSUMAP00000010247RNA_pol_Rpb1_4PF05000.172.4e-2511
ENSUMAP00000010397RNA_pol_Rpb1_2PF00623.203.7e-6911
ENSUMAP00000010355RNA_pol_Rpb1_2PF00623.205.1e-6911
ENSUMAP00000010284RNA_pol_Rpb1_2PF00623.205.6e-6911
ENSUMAP00000010230RNA_pol_Rpb1_2PF00623.209.2e-6911
ENSUMAP00000010247RNA_pol_Rpb1_2PF00623.209.3e-6911
ENSUMAP00000010171RNA_pol_Rpb1_2PF00623.201.2e-6811
ENSUMAP00000010397RNA_pol_Rpb1_3PF04983.181.4e-3111
ENSUMAP00000010284RNA_pol_Rpb1_3PF04983.183.7e-3111
ENSUMAP00000010247RNA_pol_Rpb1_3PF04983.183.8e-3111
ENSUMAP00000010230RNA_pol_Rpb1_3PF04983.183.8e-3111
ENSUMAP00000010355RNA_pol_Rpb1_3PF04983.186.2e-3111
ENSUMAP00000010171RNA_pol_Rpb1_3PF04983.186.4e-3111
ENSUMAP00000010284RNA_pol_Rpb1_1PF04997.121.1e-2111
ENSUMAP00000010230RNA_pol_Rpb1_1PF04997.122.3e-2111
ENSUMAP00000010247RNA_pol_Rpb1_1PF04997.122.3e-2111
ENSUMAP00000010171RNA_pol_Rpb1_1PF04997.123.5e-2111
ENSUMAP00000010355RNA_pol_Rpb1_1PF04997.126.6e-1911
ENSUMAP00000010397RNA_pol_Rpb1_1PF04997.129.9e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSUMAT00000012233POLR1A-2035118-ENSUMAP000000102471705 (aa)--
ENSUMAT00000012358POLR1A-2054890-ENSUMAP000000103551629 (aa)--
ENSUMAT00000012209POLR1A-2025124-ENSUMAP000000102301707 (aa)--
ENSUMAT00000012273POLR1A-2045022-ENSUMAP000000102841673 (aa)--
ENSUMAT00000012142POLR1A-2015157-ENSUMAP000000101711718 (aa)--
ENSUMAT00000012407POLR1A-2062880-ENSUMAP00000010397959 (aa)--
Gene Model
Click here to download ENSUMAG00000006700's gene model file
Pathways
Pathway IDPathway NameSource
umr03020RNA polymeraseKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000006700's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSUMAG00000006700POLR1A8431.548ENSUMAG00000013913POLR3A9131.548
ENSUMAG00000006700POLR1A6934.545ENSUMAG00000015732-6534.545
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSUMAG00000006700POLR1A10090.058ENSG00000068654POLR1A10090.233Homo_sapiens
ENSUMAG00000006700POLR1A9768.511ENSAPOG00000017945polr1a9967.260Acanthochromis_polyacanthus
ENSUMAG00000006700POLR1A10097.730ENSAMEG00000005807POLR1A10097.730Ailuropoda_melanoleuca
ENSUMAG00000006700POLR1A10064.826ENSACIG00000022147polr1a10065.820Amphilophus_citrinellus
ENSUMAG00000006700POLR1A10066.139ENSAOCG00000017336polr1a9871.528Amphiprion_ocellaris
ENSUMAG00000006700POLR1A10066.022ENSAPEG00000016105polr1a9771.528Amphiprion_percula
ENSUMAG00000006700POLR1A9770.127ENSATEG00000016773polr1a10065.906Anabas_testudineus
ENSUMAG00000006700POLR1A8672.358ENSAPLG00000013871POLR1A9972.283Anas_platyrhynchos
ENSUMAG00000006700POLR1A9772.093ENSACAG00000012141POLR1A9967.857Anolis_carolinensis
ENSUMAG00000006700POLR1A10088.773ENSANAG00000033927POLR1A10089.180Aotus_nancymaae
ENSUMAG00000006700POLR1A10062.181ENSACLG00000020541polr1a10061.902Astatotilapia_calliptera
ENSUMAG00000006700POLR1A10090.803ENSBTAG00000006481POLR1A10090.978Bos_taurus
ENSUMAG00000006700POLR1A9940.311WBGene00012999rpoa-19837.817Caenorhabditis_elegans
ENSUMAG00000006700POLR1A10088.721ENSCJAG00000019547POLR1A10088.953Callithrix_jacchus
ENSUMAG00000006700POLR1A10095.693ENSCAFG00000007613POLR1A10095.693Canis_familiaris
ENSUMAG00000006700POLR1A10095.473ENSCAFG00020014752POLR1A10095.473Canis_lupus_dingo
ENSUMAG00000006700POLR1A10089.217ENSCHIG00000018204POLR1A10089.199Capra_hircus
ENSUMAG00000006700POLR1A10087.696ENSTSYG00000002761POLR1A10087.900Carlito_syrichta
ENSUMAG00000006700POLR1A9489.274ENSCAPG00000010132POLR1A10084.031Cavia_aperea
ENSUMAG00000006700POLR1A10088.721ENSCPOG00000012350POLR1A10088.721Cavia_porcellus
ENSUMAG00000006700POLR1A10088.895ENSCCAG00000019839POLR1A10089.070Cebus_capucinus
ENSUMAG00000006700POLR1A10090.291ENSCATG00000029786POLR1A10090.698Cercocebus_atys
ENSUMAG00000006700POLR1A10088.573ENSCLAG00000005187POLR1A10088.573Chinchilla_lanigera
ENSUMAG00000006700POLR1A10090.244ENSCSAG00000016251POLR1A10090.418Chlorocebus_sabaeus
ENSUMAG00000006700POLR1A8195.804ENSCHOG00000003766-8496.471Choloepus_hoffmanni
ENSUMAG00000006700POLR1A9778.261ENSCPBG00000001115POLR1A9974.782Chrysemys_picta_bellii
ENSUMAG00000006700POLR1A8957.182ENSCSAVG00000007184-9946.281Ciona_savignyi
ENSUMAG00000006700POLR1A10088.201ENSCANG00000031785POLR1A10088.201Colobus_angolensis_palliatus
ENSUMAG00000006700POLR1A10082.193ENSCGRG00001006651Polr1a10082.435Cricetulus_griseus_chok1gshd
ENSUMAG00000006700POLR1A6285.354ENSCGRG00000010834Polr1a10085.756Cricetulus_griseus_crigri
ENSUMAG00000006700POLR1A9765.393ENSCSEG00000020190polr1a10062.073Cynoglossus_semilaevis
ENSUMAG00000006700POLR1A9769.329ENSCVAG00000020941polr1a10064.327Cyprinodon_variegatus
ENSUMAG00000006700POLR1A9770.021ENSDARG00000098375polr1a10066.338Danio_rerio
ENSUMAG00000006700POLR1A9786.320ENSDNOG00000010829POLR1A10083.101Dasypus_novemcinctus
ENSUMAG00000006700POLR1A10087.457ENSDORG00000008298Polr1a10087.666Dipodomys_ordii
ENSUMAG00000006700POLR1A9744.397FBgn0019938RpI19943.860Drosophila_melanogaster
ENSUMAG00000006700POLR1A8586.460ENSETEG00000000412-7296.875Echinops_telfairi
ENSUMAG00000006700POLR1A8167.442ENSEBUG00000005667-9967.442Eptatretus_burgeri
ENSUMAG00000006700POLR1A10093.256ENSEASG00005001625POLR1A10093.488Equus_asinus_asinus
ENSUMAG00000006700POLR1A10093.256ENSECAG00000036306-10094.802Equus_caballus
ENSUMAG00000006700POLR1A10093.256ENSECAG00000030510-10094.802Equus_caballus
ENSUMAG00000006700POLR1A10093.256ENSECAG00000010092POLR1A10094.802Equus_caballus
ENSUMAG00000006700POLR1A8796.809ENSEEUG00000000676POLR1A8596.667Erinaceus_europaeus
ENSUMAG00000006700POLR1A9770.913ENSELUG00000012769polr1a9965.685Esox_lucius
ENSUMAG00000006700POLR1A10094.645ENSFCAG00000008966POLR1A10094.645Felis_catus
ENSUMAG00000006700POLR1A9774.761ENSFALG00000010082POLR1A9970.427Ficedula_albicollis
ENSUMAG00000006700POLR1A10088.437ENSFDAG00000013726POLR1A10088.495Fukomys_damarensis
ENSUMAG00000006700POLR1A9764.925ENSFHEG00000005996polr1a10061.787Fundulus_heteroclitus
ENSUMAG00000006700POLR1A10061.357ENSGMOG00000002230polr1a10061.114Gadus_morhua
ENSUMAG00000006700POLR1A9774.973ENSGALG00000038160-9969.630Gallus_gallus
ENSUMAG00000006700POLR1A10064.203ENSGAFG00000015266polr1a10063.970Gambusia_affinis
ENSUMAG00000006700POLR1A9768.823ENSGACG00000018791polr1a10064.028Gasterosteus_aculeatus
ENSUMAG00000006700POLR1A8975.893ENSGAGG00000004984-9780.328Gopherus_agassizii
ENSUMAG00000006700POLR1A10089.884ENSGGOG00000001788POLR1A10090.058Gorilla_gorilla
ENSUMAG00000006700POLR1A9173.466ENSHBUG00000020021polr1a9969.060Haplochromis_burtoni
ENSUMAG00000006700POLR1A10089.238ENSHGLG00000006334POLR1A10089.238Heterocephalus_glaber_female
ENSUMAG00000006700POLR1A10088.979ENSHGLG00100006614POLR1A10088.979Heterocephalus_glaber_male
ENSUMAG00000006700POLR1A10063.490ENSHCOG00000003345polr1a10063.539Hippocampus_comes
ENSUMAG00000006700POLR1A10065.967ENSIPUG00000013174polr1a10065.331Ictalurus_punctatus
ENSUMAG00000006700POLR1A9789.809ENSSTOG00000012580POLR1A10086.504Ictidomys_tridecemlineatus
ENSUMAG00000006700POLR1A10087.224ENSJJAG00000013113Polr1a10087.224Jaculus_jaculus
ENSUMAG00000006700POLR1A9768.763ENSKMAG00000007399polr1a10065.238Kryptolebias_marmoratus
ENSUMAG00000006700POLR1A10065.241ENSLBEG00000015401polr1a9968.491Labrus_bergylta
ENSUMAG00000006700POLR1A9176.089ENSLACG00000003218polr1a10075.626Latimeria_chalumnae
ENSUMAG00000006700POLR1A9774.105ENSLOCG00000010881polr1a10070.400Lepisosteus_oculatus
ENSUMAG00000006700POLR1A10089.147ENSLAFG00000014948POLR1A10089.166Loxodonta_africana
ENSUMAG00000006700POLR1A10090.349ENSMFAG00000046097POLR1A10090.756Macaca_fascicularis
ENSUMAG00000006700POLR1A10090.233ENSMMUG00000015815POLR1A10090.640Macaca_mulatta
ENSUMAG00000006700POLR1A10090.349ENSMNEG00000043313POLR1A10090.756Macaca_nemestrina
ENSUMAG00000006700POLR1A10089.767ENSMLEG00000042428POLR1A10090.000Mandrillus_leucophaeus
ENSUMAG00000006700POLR1A9770.406ENSMAMG00000016565polr1a10066.588Mastacembelus_armatus
ENSUMAG00000006700POLR1A9768.936ENSMZEG00005004915polr1a10065.304Maylandia_zebra
ENSUMAG00000006700POLR1A9774.868ENSMGAG00000013111POLR1A9968.837Meleagris_gallopavo
ENSUMAG00000006700POLR1A9286.582ENSMAUG00000008497Polr1a10086.844Mesocricetus_auratus
ENSUMAG00000006700POLR1A10090.529ENSMICG00000000757POLR1A10090.413Microcebus_murinus
ENSUMAG00000006700POLR1A10086.709ENSMOCG00000000122Polr1a10086.783Microtus_ochrogaster
ENSUMAG00000006700POLR1A9769.116ENSMMOG00000010216polr1a10064.822Mola_mola
ENSUMAG00000006700POLR1A9780.993ENSMODG00000009335POLR1A10074.281Monodelphis_domestica
ENSUMAG00000006700POLR1A9669.947ENSMALG00000013363polr1a10064.968Monopterus_albus
ENSUMAG00000006700POLR1A10085.449MGP_CAROLIEiJ_G0028494Polr1a10085.217Mus_caroli
ENSUMAG00000006700POLR1A10085.333ENSMUSG00000049553Polr1a10085.159Mus_musculus
ENSUMAG00000006700POLR1A10086.203MGP_PahariEiJ_G0022230Polr1a10086.029Mus_pahari
ENSUMAG00000006700POLR1A9787.407MGP_SPRETEiJ_G0029499Polr1a10084.057Mus_spretus
ENSUMAG00000006700POLR1A10095.343ENSMPUG00000009135POLR1A10095.343Mustela_putorius_furo
ENSUMAG00000006700POLR1A10090.504ENSMLUG00000015723POLR1A10090.504Myotis_lucifugus
ENSUMAG00000006700POLR1A10086.783ENSNGAG00000017907Polr1a10087.022Nannospalax_galili
ENSUMAG00000006700POLR1A10065.868ENSNBRG00000000519polr1a10065.421Neolamprologus_brichardi
ENSUMAG00000006700POLR1A10088.137ENSNLEG00000002264POLR1A10088.194Nomascus_leucogenys
ENSUMAG00000006700POLR1A7894.048ENSMEUG00000011665-7592.126Notamacropus_eugenii
ENSUMAG00000006700POLR1A9982.343ENSOPRG00000008269POLR1A10081.754Ochotona_princeps
ENSUMAG00000006700POLR1A10088.669ENSODEG00000003542POLR1A10088.786Octodon_degus
ENSUMAG00000006700POLR1A10066.161ENSONIG00000015895polr1a10065.685Oreochromis_niloticus
ENSUMAG00000006700POLR1A7469.577ENSOANG00000012384-10069.577Ornithorhynchus_anatinus
ENSUMAG00000006700POLR1A10089.773ENSOCUG00000010138POLR1A10089.948Oryctolagus_cuniculus
ENSUMAG00000006700POLR1A9767.553ENSORLG00000008753polr1a9964.558Oryzias_latipes
ENSUMAG00000006700POLR1A10063.871ENSORLG00020020726polr1a9964.132Oryzias_latipes_hni
ENSUMAG00000006700POLR1A9573.404ENSORLG00015016071polr1a9873.333Oryzias_latipes_hsok
ENSUMAG00000006700POLR1A10089.244ENSOGAG00000004031POLR1A10089.244Otolemur_garnettii
ENSUMAG00000006700POLR1A10090.534ENSOARG00000020601POLR1A10090.534Ovis_aries
ENSUMAG00000006700POLR1A10089.767ENSPPAG00000042450POLR1A10089.942Pan_paniscus
ENSUMAG00000006700POLR1A10094.936ENSPPRG00000006702POLR1A10094.936Panthera_pardus
ENSUMAG00000006700POLR1A10094.490ENSPTIG00000018783POLR1A10094.490Panthera_tigris_altaica
ENSUMAG00000006700POLR1A10089.942ENSPTRG00000012147POLR1A10090.000Pan_troglodytes
ENSUMAG00000006700POLR1A10090.174ENSPANG00000025908POLR1A10090.581Papio_anubis
ENSUMAG00000006700POLR1A9771.398ENSPKIG00000005468polr1a9974.306Paramormyrops_kingsleyae
ENSUMAG00000006700POLR1A6571.863ENSPSIG00000009321-9971.863Pelodiscus_sinensis
ENSUMAG00000006700POLR1A9767.059ENSPMGG00000009718polr1a9567.462Periophthalmus_magnuspinnatus
ENSUMAG00000006700POLR1A10087.022ENSPEMG00000022224Polr1a10087.362Peromyscus_maniculatus_bairdii
ENSUMAG00000006700POLR1A9781.895ENSPCIG00000004222POLR1A9978.245Phascolarctos_cinereus
ENSUMAG00000006700POLR1A9767.732ENSPFOG00000005025polr1a10064.399Poecilia_formosa
ENSUMAG00000006700POLR1A9767.945ENSPLAG00000021389polr1a10064.593Poecilia_latipinna
ENSUMAG00000006700POLR1A10063.432ENSPMEG00000006463polr1a10063.432Poecilia_mexicana
ENSUMAG00000006700POLR1A9768.051ENSPREG00000002389polr1a10073.643Poecilia_reticulata
ENSUMAG00000006700POLR1A10089.419ENSPPYG00000012217POLR1A10089.593Pongo_abelii
ENSUMAG00000006700POLR1A9396.000ENSPCAG00000011582POLR1A9296.000Procavia_capensis
ENSUMAG00000006700POLR1A10090.296ENSPCOG00000026987POLR1A10090.238Propithecus_coquereli
ENSUMAG00000006700POLR1A9594.118ENSPVAG00000012674POLR1A9593.640Pteropus_vampyrus
ENSUMAG00000006700POLR1A9768.936ENSPNYG00000000026polr1a10065.304Pundamilia_nyererei
ENSUMAG00000006700POLR1A9769.873ENSPNAG00000019223polr1a9967.532Pygocentrus_nattereri
ENSUMAG00000006700POLR1A10086.477ENSRNOG00000009545Polr1a10086.609Rattus_norvegicus
ENSUMAG00000006700POLR1A10089.489ENSRBIG00000028335POLR1A10089.721Rhinopithecus_bieti
ENSUMAG00000006700POLR1A10089.431ENSRROG00000031473POLR1A10089.663Rhinopithecus_roxellana
ENSUMAG00000006700POLR1A9246.923YOR341WRPA1909936.389Saccharomyces_cerevisiae
ENSUMAG00000006700POLR1A10088.547ENSSBOG00000030262POLR1A10088.734Saimiri_boliviensis_boliviensis
ENSUMAG00000006700POLR1A10073.064ENSSHAG00000014739POLR1A10073.237Sarcophilus_harrisii
ENSUMAG00000006700POLR1A9772.814ENSSFOG00015019716polr1a10067.153Scleropages_formosus
ENSUMAG00000006700POLR1A9769.296ENSSMAG00000014342polr1a10065.517Scophthalmus_maximus
ENSUMAG00000006700POLR1A10066.764ENSSDUG00000014631polr1a10066.530Seriola_dumerili
ENSUMAG00000006700POLR1A10065.854ENSSLDG00000024095polr1a10066.897Seriola_lalandi_dorsalis
ENSUMAG00000006700POLR1A7598.936ENSSARG00000003136-7698.936Sorex_araneus
ENSUMAG00000006700POLR1A9776.364ENSSPUG00000004215POLR1A9978.462Sphenodon_punctatus
ENSUMAG00000006700POLR1A9965.294ENSSPAG00000016341polr1a9471.655Stegastes_partitus
ENSUMAG00000006700POLR1A9790.986ENSSSCG00000008226POLR1A9991.778Sus_scrofa
ENSUMAG00000006700POLR1A9774.286ENSTGUG00000010704POLR1A10069.718Taeniopygia_guttata
ENSUMAG00000006700POLR1A9767.945ENSTRUG00000002210polr1a9667.686Takifugu_rubripes
ENSUMAG00000006700POLR1A9763.474ENSTNIG00000010116polr1a10059.492Tetraodon_nigroviridis
ENSUMAG00000006700POLR1A7495.575ENSTBEG00000008646POLR1A7495.575Tupaia_belangeri
ENSUMAG00000006700POLR1A10087.485ENSTTRG00000008597POLR1A10087.369Tursiops_truncatus
ENSUMAG00000006700POLR1A7298.051ENSUAMG00000012158-9598.051Ursus_americanus
ENSUMAG00000006700POLR1A10095.518ENSVVUG00000001245POLR1A10095.518Vulpes_vulpes
ENSUMAG00000006700POLR1A10067.748ENSXETG00000001952polr1a10068.833Xenopus_tropicalis
ENSUMAG00000006700POLR1A7073.333ENSXCOG00000013384polr1a9273.333Xiphophorus_couchianus
ENSUMAG00000006700POLR1A9768.264ENSXMAG00000004032polr1a10064.851Xiphophorus_maculatus

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