EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000007166 (Gene tree)
Gene ID: 103670743
Gene Symbol: SLIRP
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 8102 bases
Position: chrKK498517.1:19514474-19522575
Accession: 103670743
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000009485	RRM_1	PF00076.22	4.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000011348	SLIRP-201	336	-	ENSUMAP00000009485	111 (aa)	XP_008697466	UPI0004E017A1

Gene Model

Click here to download ENSUMAG00000007166's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000007166's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000007166	SLIRP	87	72.165	ENSG00000119705	SLIRP	96	79.545	Homo_sapiens
ENSUMAG00000007166	SLIRP	68	61.842	ENSAPOG00000001298	slirp	76	61.842	Acanthochromis_polyacanthus
ENSUMAG00000007166	SLIRP	82	92.308	ENSAMEG00000003975	SLIRP	100	92.308	Ailuropoda_melanoleuca
ENSUMAG00000007166	SLIRP	92	51.456	ENSACIG00000023083	slirp	99	51.456	Amphilophus_citrinellus
ENSUMAG00000007166	SLIRP	78	57.955	ENSAOCG00000006342	slirp	87	57.955	Amphiprion_ocellaris
ENSUMAG00000007166	SLIRP	78	57.955	ENSAPEG00000015719	-	88	57.955	Amphiprion_percula
ENSUMAG00000007166	SLIRP	78	57.955	ENSAPEG00000015917	slirp	87	57.955	Amphiprion_percula
ENSUMAG00000007166	SLIRP	80	50.562	ENSATEG00000013525	slirp	89	50.562	Anabas_testudineus
ENSUMAG00000007166	SLIRP	78	55.682	ENSAMXG00000018693	slirp	88	55.682	Astyanax_mexicanus
ENSUMAG00000007166	SLIRP	100	77.477	ENSCJAG00000016946	SLIRP	100	77.477	Callithrix_jacchus
ENSUMAG00000007166	SLIRP	100	82.883	ENSCAFG00020015876	-	100	82.883	Canis_lupus_dingo
ENSUMAG00000007166	SLIRP	100	78.378	ENSCCAG00000030130	SLIRP	100	78.378	Cebus_capucinus
ENSUMAG00000007166	SLIRP	100	73.874	ENSCATG00000036327	SLIRP	95	79.545	Cercocebus_atys
ENSUMAG00000007166	SLIRP	90	75.000	ENSCSAG00000011736	SLIRP	100	76.577	Chlorocebus_sabaeus
ENSUMAG00000007166	SLIRP	78	55.172	ENSCPBG00000026327	SLIRP	88	55.172	Chrysemys_picta_bellii
ENSUMAG00000007166	SLIRP	67	81.081	ENSCANG00000032892	SLIRP	90	80.682	Colobus_angolensis_palliatus
ENSUMAG00000007166	SLIRP	100	69.369	ENSCGRG00001024068	Slirp	100	69.369	Cricetulus_griseus_chok1gshd
ENSUMAG00000007166	SLIRP	100	69.369	ENSCGRG00000017440	Slirp	100	69.369	Cricetulus_griseus_crigri
ENSUMAG00000007166	SLIRP	83	58.696	ENSCSEG00000015766	slirp	84	58.696	Cynoglossus_semilaevis
ENSUMAG00000007166	SLIRP	62	57.971	ENSCVAG00000012504	slirp	68	57.971	Cyprinodon_variegatus
ENSUMAG00000007166	SLIRP	68	56.000	ENSDARG00000097753	slirp	72	56.757	Danio_rerio
ENSUMAG00000007166	SLIRP	82	75.824	ENSDNOG00000007721	SLIRP	100	72.072	Dasypus_novemcinctus
ENSUMAG00000007166	SLIRP	100	80.180	ENSDORG00000012379	Slirp	100	80.180	Dipodomys_ordii
ENSUMAG00000007166	SLIRP	90	73.000	ENSETEG00000010345	SLIRP	100	72.973	Echinops_telfairi
ENSUMAG00000007166	SLIRP	100	90.991	ENSEASG00005020193	SLIRP	100	90.991	Equus_asinus_asinus
ENSUMAG00000007166	SLIRP	92	62.745	ENSEEUG00000007257	SLIRP	100	62.745	Erinaceus_europaeus
ENSUMAG00000007166	SLIRP	77	55.814	ENSELUG00000016800	slirp	84	55.814	Esox_lucius
ENSUMAG00000007166	SLIRP	80	88.764	ENSFCAG00000036326	SLIRP	91	88.764	Felis_catus
ENSUMAG00000007166	SLIRP	64	54.930	ENSFALG00000012583	SLIRP	84	52.747	Ficedula_albicollis
ENSUMAG00000007166	SLIRP	97	71.681	ENSFDAG00000008347	SLIRP	100	71.681	Fukomys_damarensis
ENSUMAG00000007166	SLIRP	59	53.731	ENSFHEG00000004709	slirp	73	53.731	Fundulus_heteroclitus
ENSUMAG00000007166	SLIRP	67	56.757	ENSGMOG00000016948	slirp	71	56.757	Gadus_morhua
ENSUMAG00000007166	SLIRP	74	56.098	ENSGALG00000031238	SLIRP	87	56.471	Gallus_gallus
ENSUMAG00000007166	SLIRP	82	55.435	ENSGAFG00000010998	slirp	89	55.435	Gambusia_affinis
ENSUMAG00000007166	SLIRP	65	54.167	ENSGACG00000020137	slirp	84	54.167	Gasterosteus_aculeatus
ENSUMAG00000007166	SLIRP	97	51.852	ENSGAGG00000009953	SLIRP	74	51.852	Gopherus_agassizii
ENSUMAG00000007166	SLIRP	87	72.165	ENSGGOG00000011059	-	95	79.545	Gorilla_gorilla
ENSUMAG00000007166	SLIRP	100	71.171	ENSHGLG00000018491	SLIRP	100	71.171	Heterocephalus_glaber_female
ENSUMAG00000007166	SLIRP	100	71.171	ENSHGLG00100014153	SLIRP	100	71.171	Heterocephalus_glaber_male
ENSUMAG00000007166	SLIRP	81	52.747	ENSHCOG00000006795	slirp	90	52.747	Hippocampus_comes
ENSUMAG00000007166	SLIRP	68	57.895	ENSIPUG00000010214	SLIRP	76	57.895	Ictalurus_punctatus
ENSUMAG00000007166	SLIRP	90	83.000	ENSSTOG00000034316	SLIRP	100	83.784	Ictidomys_tridecemlineatus
ENSUMAG00000007166	SLIRP	81	43.333	ENSKMAG00000002038	slirp	87	43.333	Kryptolebias_marmoratus
ENSUMAG00000007166	SLIRP	81	52.747	ENSLBEG00000007564	slirp	88	52.747	Labrus_bergylta
ENSUMAG00000007166	SLIRP	82	52.747	ENSLACG00000013434	SLIRP	87	52.747	Latimeria_chalumnae
ENSUMAG00000007166	SLIRP	90	74.000	ENSMFAG00000042960	SLIRP	100	74.775	Macaca_fascicularis
ENSUMAG00000007166	SLIRP	90	74.000	ENSMMUG00000029256	SLIRP	95	80.682	Macaca_mulatta
ENSUMAG00000007166	SLIRP	90	74.000	ENSMNEG00000028921	SLIRP	100	74.775	Macaca_nemestrina
ENSUMAG00000007166	SLIRP	79	79.545	ENSMLEG00000043644	SLIRP	90	79.545	Mandrillus_leucophaeus
ENSUMAG00000007166	SLIRP	81	54.945	ENSMZEG00005004617	slirp	89	54.945	Maylandia_zebra
ENSUMAG00000007166	SLIRP	100	75.676	ENSMAUG00000003857	Slirp	100	75.676	Mesocricetus_auratus
ENSUMAG00000007166	SLIRP	100	73.874	ENSMICG00000012080	SLIRP	100	73.874	Microcebus_murinus
ENSUMAG00000007166	SLIRP	98	75.229	ENSMOCG00000016019	Slirp	97	75.229	Microtus_ochrogaster
ENSUMAG00000007166	SLIRP	68	60.526	ENSMMOG00000018268	slirp	76	60.526	Mola_mola
ENSUMAG00000007166	SLIRP	63	67.143	ENSMODG00000005207	-	99	67.143	Monodelphis_domestica
ENSUMAG00000007166	SLIRP	81	52.222	ENSMALG00000012581	slirp	90	52.222	Monopterus_albus
ENSUMAG00000007166	SLIRP	97	78.704	MGP_CAROLIEiJ_G0017995	Slirp	100	78.704	Mus_caroli
ENSUMAG00000007166	SLIRP	98	78.899	ENSMUSG00000021040	Slirp	97	78.899	Mus_musculus
ENSUMAG00000007166	SLIRP	98	78.899	MGP_SPRETEiJ_G0018840	Slirp	97	78.899	Mus_spretus
ENSUMAG00000007166	SLIRP	90	82.000	ENSMLUG00000029544	-	100	81.081	Myotis_lucifugus
ENSUMAG00000007166	SLIRP	85	84.043	ENSMLUG00000024998	-	100	81.081	Myotis_lucifugus
ENSUMAG00000007166	SLIRP	97	77.778	ENSNGAG00000016363	Slirp	100	77.778	Nannospalax_galili
ENSUMAG00000007166	SLIRP	100	72.072	ENSNLEG00000032459	-	95	77.273	Nomascus_leucogenys
ENSUMAG00000007166	SLIRP	93	68.932	ENSNLEG00000027238	-	93	74.074	Nomascus_leucogenys
ENSUMAG00000007166	SLIRP	98	77.064	ENSODEG00000012580	SLIRP	97	77.064	Octodon_degus
ENSUMAG00000007166	SLIRP	81	54.444	ENSONIG00000011692	slirp	89	54.444	Oreochromis_niloticus
ENSUMAG00000007166	SLIRP	89	55.046	ENSOANG00000022366	SLIRP	98	55.046	Ornithorhynchus_anatinus
ENSUMAG00000007166	SLIRP	80	53.933	ENSORLG00000010761	slirp	69	53.933	Oryzias_latipes
ENSUMAG00000007166	SLIRP	80	55.056	ENSORLG00020022188	slirp	89	55.056	Oryzias_latipes_hni
ENSUMAG00000007166	SLIRP	99	48.182	ENSORLG00015020171	slirp	100	48.182	Oryzias_latipes_hsok
ENSUMAG00000007166	SLIRP	68	60.526	ENSOMEG00000019321	slirp	76	60.526	Oryzias_melastigma
ENSUMAG00000007166	SLIRP	87	72.165	ENSPPAG00000040710	-	95	79.545	Pan_paniscus
ENSUMAG00000007166	SLIRP	80	88.764	ENSPPRG00000014350	SLIRP	91	88.764	Panthera_pardus
ENSUMAG00000007166	SLIRP	80	88.764	ENSPTIG00000014196	SLIRP	91	88.764	Panthera_tigris_altaica
ENSUMAG00000007166	SLIRP	86	73.684	ENSPTRG00000030691	SLIRP	95	79.545	Pan_troglodytes
ENSUMAG00000007166	SLIRP	100	75.676	ENSPANG00000026323	SLIRP	95	80.682	Papio_anubis
ENSUMAG00000007166	SLIRP	61	51.471	ENSPKIG00000008831	slirp	67	51.471	Paramormyrops_kingsleyae
ENSUMAG00000007166	SLIRP	61	60.294	ENSPMGG00000010541	slirp	78	60.294	Periophthalmus_magnuspinnatus
ENSUMAG00000007166	SLIRP	88	70.707	ENSPEMG00000013234	Slirp	96	70.000	Peromyscus_maniculatus_bairdii
ENSUMAG00000007166	SLIRP	61	50.000	ENSPMAG00000009355	slirp	76	50.000	Petromyzon_marinus
ENSUMAG00000007166	SLIRP	72	60.976	ENSPCIG00000026842	-	88	60.976	Phascolarctos_cinereus
ENSUMAG00000007166	SLIRP	81	56.044	ENSPFOG00000006758	slirp	88	56.044	Poecilia_formosa
ENSUMAG00000007166	SLIRP	81	57.143	ENSPLAG00000011140	slirp	88	57.143	Poecilia_latipinna
ENSUMAG00000007166	SLIRP	81	56.044	ENSPMEG00000019535	slirp	88	56.044	Poecilia_mexicana
ENSUMAG00000007166	SLIRP	81	56.044	ENSPREG00000011673	slirp	88	56.044	Poecilia_reticulata
ENSUMAG00000007166	SLIRP	88	71.429	ENSPPYG00000006030	SLIRP	97	72.477	Pongo_abelii
ENSUMAG00000007166	SLIRP	100	75.676	ENSPCOG00000015159	SLIRP	100	75.676	Propithecus_coquereli
ENSUMAG00000007166	SLIRP	80	59.551	ENSPNAG00000008633	slirp	89	59.551	Pygocentrus_nattereri
ENSUMAG00000007166	SLIRP	68	78.667	ENSRBIG00000031396	-	86	80.233	Rhinopithecus_bieti
ENSUMAG00000007166	SLIRP	88	70.408	ENSRBIG00000035817	-	100	72.477	Rhinopithecus_bieti
ENSUMAG00000007166	SLIRP	90	76.000	ENSRBIG00000032222	-	100	77.477	Rhinopithecus_bieti
ENSUMAG00000007166	SLIRP	69	76.623	ENSRBIG00000032998	-	81	78.409	Rhinopithecus_bieti
ENSUMAG00000007166	SLIRP	69	77.922	ENSRROG00000017133	-	92	79.545	Rhinopithecus_roxellana
ENSUMAG00000007166	SLIRP	68	80.000	ENSRROG00000035604	-	86	81.395	Rhinopithecus_roxellana
ENSUMAG00000007166	SLIRP	83	71.739	ENSRROG00000041312	-	99	73.786	Rhinopithecus_roxellana
ENSUMAG00000007166	SLIRP	90	75.000	ENSRROG00000036656	-	100	76.577	Rhinopithecus_roxellana
ENSUMAG00000007166	SLIRP	79	76.136	ENSSBOG00000020014	SLIRP	95	76.136	Saimiri_boliviensis_boliviensis
ENSUMAG00000007166	SLIRP	69	61.039	ENSSFOG00015011165	slirp	78	61.039	Scleropages_formosus
ENSUMAG00000007166	SLIRP	78	44.828	ENSSMAG00000012930	slirp	85	44.828	Scophthalmus_maximus
ENSUMAG00000007166	SLIRP	80	55.056	ENSSDUG00000021883	slirp	59	55.056	Seriola_dumerili
ENSUMAG00000007166	SLIRP	80	55.056	ENSSLDG00000023136	slirp	81	55.056	Seriola_lalandi_dorsalis
ENSUMAG00000007166	SLIRP	76	52.941	ENSSPUG00000009346	SLIRP	87	52.941	Sphenodon_punctatus
ENSUMAG00000007166	SLIRP	67	56.757	ENSSPAG00000013477	slirp	74	56.757	Stegastes_partitus
ENSUMAG00000007166	SLIRP	100	81.982	ENSSSCG00000028167	SLIRP	100	81.982	Sus_scrofa
ENSUMAG00000007166	SLIRP	64	57.746	ENSTGUG00000012337	SLIRP	84	56.044	Taeniopygia_guttata
ENSUMAG00000007166	SLIRP	80	51.111	ENSTRUG00000020127	slirp	88	51.111	Takifugu_rubripes
ENSUMAG00000007166	SLIRP	100	99.099	ENSUAMG00000022445	SLIRP	100	99.099	Ursus_americanus
ENSUMAG00000007166	SLIRP	100	79.279	ENSVPAG00000001781	SLIRP	100	79.279	Vicugna_pacos
ENSUMAG00000007166	SLIRP	86	86.458	ENSVVUG00000004436	SLIRP	100	85.586	Vulpes_vulpes
ENSUMAG00000007166	SLIRP	63	58.571	ENSXETG00000030343	SLIRP	79	58.571	Xenopus_tropicalis
ENSUMAG00000007166	SLIRP	81	52.747	ENSXCOG00000009422	slirp	88	52.747	Xiphophorus_couchianus
ENSUMAG00000007166	SLIRP	81	53.846	ENSXMAG00000015655	slirp	88	53.846	Xiphophorus_maculatus