EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000009712	MMR_HSR1	PF01926.23	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000011611	ARF6-201	516	-	ENSUMAP00000009712	151 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000007345	ARF6	86	48.092	ENSUMAG00000007990	-	69	48.092
ENSUMAG00000007345	ARF6	99	66.443	ENSUMAG00000021908	ARF4	83	66.443
ENSUMAG00000007345	ARF6	99	45.098	ENSUMAG00000017197	ARL5C	85	45.098
ENSUMAG00000007345	ARF6	92	49.640	ENSUMAG00000023500	ARL3	76	49.640
ENSUMAG00000007345	ARF6	76	45.833	ENSUMAG00000013306	ARL4C	63	45.833
ENSUMAG00000007345	ARF6	99	43.137	ENSUMAG00000013390	ARL5B	85	43.137
ENSUMAG00000007345	ARF6	97	70.068	ENSUMAG00000015477	-	81	70.068
ENSUMAG00000007345	ARF6	99	68.627	ENSUMAG00000000918	ARF1	70	68.627
ENSUMAG00000007345	ARF6	93	59.286	ENSUMAG00000019547	ARL1	83	57.333
ENSUMAG00000007345	ARF6	99	47.368	ENSUMAG00000018435	ARL11	82	47.368
ENSUMAG00000007345	ARF6	75	37.069	ENSUMAG00000024507	ARL10	65	37.069
ENSUMAG00000007345	ARF6	97	42.763	ENSUMAG00000013919	ARL6	82	42.763
ENSUMAG00000007345	ARF6	93	38.298	ENSUMAG00000019574	ARL8B	76	38.298
ENSUMAG00000007345	ARF6	99	44.371	ENSUMAG00000011131	ARL14	83	44.371
ENSUMAG00000007345	ARF6	99	69.799	ENSUMAG00000006555	-	82	69.799
ENSUMAG00000007345	ARF6	86	38.346	ENSUMAG00000007921	SAR1A	66	38.346
ENSUMAG00000007345	ARF6	86	44.444	ENSUMAG00000012795	ARL4D	67	44.444
ENSUMAG00000007345	ARF6	85	30.935	ENSUMAG00000023270	RAB5C	62	30.935
ENSUMAG00000007345	ARF6	99	69.799	ENSUMAG00000004814	-	60	69.799
ENSUMAG00000007345	ARF6	97	43.836	ENSUMAG00000002404	ARL5A	85	43.836
ENSUMAG00000007345	ARF6	79	30.000	ENSUMAG00000018295	RAB5A	58	30.000
ENSUMAG00000007345	ARF6	86	38.346	ENSUMAG00000017678	SAR1B	71	38.346

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000007345	ARF6	99	97.386	ENSAPLG00000001640	ARF6	85	97.386	Anas_platyrhynchos
ENSUMAG00000007345	ARF6	99	99.329	ENSACAG00000001335	ARF6	85	99.329	Anolis_carolinensis
ENSUMAG00000007345	ARF6	94	98.592	ENSLBEG00000024782	ARF6	78	98.592	Labrus_bergylta
ENSUMAG00000007345	ARF6	98	100.000	ENSMFAG00000001534	ARF6	100	100.000	Macaca_fascicularis
ENSUMAG00000007345	ARF6	98	100.000	ENSMNEG00000035341	ARF6	100	100.000	Macaca_nemestrina
ENSUMAG00000007345	ARF6	95	70.548	ENSPMAG00000010222	ARF6	81	70.548	Petromyzon_marinus
ENSUMAG00000007345	ARF6	91	99.270	ENSPVAG00000017937	ARF6	100	99.270	Pteropus_vampyrus
ENSUMAG00000007345	ARF6	98	100.000	ENSSMAG00000006815	ARF6	100	100.000	Scophthalmus_maximus
ENSUMAG00000007345	ARF6	98	100.000	ENSSSCG00000005012	ARF6	100	100.000	Sus_scrofa
ENSUMAG00000007345	ARF6	99	96.644	ENSTNIG00000019582	arf6b	85	96.644	Tetraodon_nigroviridis
ENSUMAG00000007345	ARF6	100	98.675	ENSVVUG00000029816	ARF6	92	98.675	Vulpes_vulpes