EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000007666 (Gene tree)
Gene ID: 103663588
Gene Symbol: PTCD2
Alias: -
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 31564 bases
Position: chrKK498597.1:4858346-4889909
Accession: 103663588
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000010190	MRP-S27	PF10037.9	1.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000012162	PTCD2-201	1756	-	ENSUMAP00000010190	383 (aa)	XP_008689534	UPI0004E01224

Gene Model

Click here to download ENSUMAG00000007666's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000007666's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000007666	PTCD2	100	77.807	ENSG00000049883	PTCD2	100	79.803	Homo_sapiens
ENSUMAG00000007666	PTCD2	95	45.879	ENSAPOG00000020682	ptcd2	95	45.879	Acanthochromis_polyacanthus
ENSUMAG00000007666	PTCD2	100	97.650	ENSAMEG00000007194	PTCD2	99	97.650	Ailuropoda_melanoleuca
ENSUMAG00000007666	PTCD2	90	40.401	ENSACIG00000002053	ptcd2	100	40.401	Amphilophus_citrinellus
ENSUMAG00000007666	PTCD2	97	44.892	ENSAOCG00000006616	ptcd2	95	44.892	Amphiprion_ocellaris
ENSUMAG00000007666	PTCD2	95	45.013	ENSAPEG00000022926	ptcd2	93	45.013	Amphiprion_percula
ENSUMAG00000007666	PTCD2	97	56.720	ENSACAG00000009747	PTCD2	93	56.720	Anolis_carolinensis
ENSUMAG00000007666	PTCD2	100	79.634	ENSANAG00000029353	PTCD2	99	79.634	Aotus_nancymaae
ENSUMAG00000007666	PTCD2	95	45.082	ENSACLG00000027742	ptcd2	93	45.082	Astatotilapia_calliptera
ENSUMAG00000007666	PTCD2	84	45.511	ENSAMXG00000029404	ptcd2	86	45.511	Astyanax_mexicanus
ENSUMAG00000007666	PTCD2	100	80.990	ENSBTAG00000014675	PTCD2	100	80.990	Bos_taurus
ENSUMAG00000007666	PTCD2	100	78.851	ENSCJAG00000016364	PTCD2	99	78.851	Callithrix_jacchus
ENSUMAG00000007666	PTCD2	100	86.423	ENSCAFG00000007982	PTCD2	90	86.423	Canis_familiaris
ENSUMAG00000007666	PTCD2	90	89.017	ENSCAFG00020019147	PTCD2	97	89.017	Canis_lupus_dingo
ENSUMAG00000007666	PTCD2	100	81.771	ENSCHIG00000017118	PTCD2	100	81.771	Capra_hircus
ENSUMAG00000007666	PTCD2	100	71.018	ENSCPOG00000040168	PTCD2	100	71.018	Cavia_porcellus
ENSUMAG00000007666	PTCD2	78	76.768	ENSCCAG00000021996	-	95	74.351	Cebus_capucinus
ENSUMAG00000007666	PTCD2	100	78.590	ENSCCAG00000029389	-	99	78.590	Cebus_capucinus
ENSUMAG00000007666	PTCD2	100	76.762	ENSCATG00000019069	PTCD2	100	76.762	Cercocebus_atys
ENSUMAG00000007666	PTCD2	100	74.151	ENSCLAG00000000072	PTCD2	100	74.151	Chinchilla_lanigera
ENSUMAG00000007666	PTCD2	100	78.329	ENSCSAG00000015623	PTCD2	100	78.329	Chlorocebus_sabaeus
ENSUMAG00000007666	PTCD2	90	58.621	ENSCHOG00000010634	PTCD2	100	58.621	Choloepus_hoffmanni
ENSUMAG00000007666	PTCD2	100	55.065	ENSCPBG00000000216	PTCD2	98	55.065	Chrysemys_picta_bellii
ENSUMAG00000007666	PTCD2	100	77.023	ENSCANG00000035636	PTCD2	99	77.023	Colobus_angolensis_palliatus
ENSUMAG00000007666	PTCD2	96	73.442	ENSCGRG00001015289	Ptcd2	81	73.442	Cricetulus_griseus_chok1gshd
ENSUMAG00000007666	PTCD2	96	73.442	ENSCGRG00000006193	Ptcd2	81	73.442	Cricetulus_griseus_crigri
ENSUMAG00000007666	PTCD2	98	43.200	ENSCVAG00000001285	ptcd2	95	43.200	Cyprinodon_variegatus
ENSUMAG00000007666	PTCD2	97	45.040	ENSDARG00000035391	ptcd2	97	45.040	Danio_rerio
ENSUMAG00000007666	PTCD2	100	77.546	ENSDNOG00000008719	PTCD2	100	77.546	Dasypus_novemcinctus
ENSUMAG00000007666	PTCD2	100	76.486	ENSDORG00000004921	Ptcd2	100	76.486	Dipodomys_ordii
ENSUMAG00000007666	PTCD2	100	69.531	ENSETEG00000016542	PTCD2	99	69.531	Echinops_telfairi
ENSUMAG00000007666	PTCD2	100	79.896	ENSEASG00005018038	PTCD2	100	79.896	Equus_asinus_asinus
ENSUMAG00000007666	PTCD2	97	80.914	ENSECAG00000007022	PTCD2	96	80.914	Equus_caballus
ENSUMAG00000007666	PTCD2	100	73.107	ENSEEUG00000014031	PTCD2	99	73.107	Erinaceus_europaeus
ENSUMAG00000007666	PTCD2	92	48.870	ENSELUG00000003584	ptcd2	92	48.870	Esox_lucius
ENSUMAG00000007666	PTCD2	100	79.634	ENSFCAG00000045432	PTCD2	82	79.634	Felis_catus
ENSUMAG00000007666	PTCD2	85	50.765	ENSFALG00000010299	PTCD2	99	50.765	Ficedula_albicollis
ENSUMAG00000007666	PTCD2	100	73.368	ENSFDAG00000018461	PTCD2	100	73.368	Fukomys_damarensis
ENSUMAG00000007666	PTCD2	91	49.573	ENSGMOG00000003637	ptcd2	91	49.573	Gadus_morhua
ENSUMAG00000007666	PTCD2	92	50.142	ENSGALG00000038260	PTCD2	93	50.142	Gallus_gallus
ENSUMAG00000007666	PTCD2	94	58.774	ENSGAGG00000021952	PTCD2	92	58.774	Gopherus_agassizii
ENSUMAG00000007666	PTCD2	100	77.807	ENSGGOG00000010695	PTCD2	99	77.807	Gorilla_gorilla
ENSUMAG00000007666	PTCD2	95	45.082	ENSHBUG00000009191	ptcd2	93	45.082	Haplochromis_burtoni
ENSUMAG00000007666	PTCD2	97	75.741	ENSHGLG00000001234	PTCD2	97	75.741	Heterocephalus_glaber_female
ENSUMAG00000007666	PTCD2	100	74.151	ENSHGLG00100015419	PTCD2	100	74.151	Heterocephalus_glaber_male
ENSUMAG00000007666	PTCD2	95	46.556	ENSHCOG00000001703	ptcd2	92	46.556	Hippocampus_comes
ENSUMAG00000007666	PTCD2	86	45.152	ENSIPUG00000006080	ptcd2	91	44.160	Ictalurus_punctatus
ENSUMAG00000007666	PTCD2	99	77.749	ENSSTOG00000006596	PTCD2	99	77.749	Ictidomys_tridecemlineatus
ENSUMAG00000007666	PTCD2	100	74.413	ENSJJAG00000024388	Ptcd2	100	74.413	Jaculus_jaculus
ENSUMAG00000007666	PTCD2	97	42.473	ENSKMAG00000009329	ptcd2	96	42.473	Kryptolebias_marmoratus
ENSUMAG00000007666	PTCD2	95	45.355	ENSLBEG00000024871	ptcd2	93	45.355	Labrus_bergylta
ENSUMAG00000007666	PTCD2	96	53.261	ENSLOCG00000011122	ptcd2	95	53.261	Lepisosteus_oculatus
ENSUMAG00000007666	PTCD2	81	79.421	ENSLAFG00000004115	PTCD2	100	79.421	Loxodonta_africana
ENSUMAG00000007666	PTCD2	100	76.501	ENSMFAG00000031516	PTCD2	99	76.501	Macaca_fascicularis
ENSUMAG00000007666	PTCD2	100	76.240	ENSMNEG00000007537	PTCD2	100	76.240	Macaca_nemestrina
ENSUMAG00000007666	PTCD2	100	76.501	ENSMLEG00000031093	PTCD2	99	76.501	Mandrillus_leucophaeus
ENSUMAG00000007666	PTCD2	97	45.430	ENSMAMG00000018529	ptcd2	97	45.430	Mastacembelus_armatus
ENSUMAG00000007666	PTCD2	95	45.082	ENSMZEG00005003625	ptcd2	93	45.082	Maylandia_zebra
ENSUMAG00000007666	PTCD2	91	50.000	ENSMGAG00000005033	PTCD2	100	50.000	Meleagris_gallopavo
ENSUMAG00000007666	PTCD2	97	57.412	ENSMAUG00000020253	Ptcd2	97	57.412	Mesocricetus_auratus
ENSUMAG00000007666	PTCD2	100	78.329	ENSMICG00000004535	PTCD2	99	78.329	Microcebus_murinus
ENSUMAG00000007666	PTCD2	97	73.585	ENSMOCG00000019985	Ptcd2	97	73.585	Microtus_ochrogaster
ENSUMAG00000007666	PTCD2	100	56.010	ENSMODG00000001695	PTCD2	100	56.010	Monodelphis_domestica
ENSUMAG00000007666	PTCD2	97	45.430	ENSMALG00000022372	ptcd2	97	45.430	Monopterus_albus
ENSUMAG00000007666	PTCD2	97	71.968	MGP_CAROLIEiJ_G0018829	Ptcd2	97	71.968	Mus_caroli
ENSUMAG00000007666	PTCD2	97	70.620	ENSMUSG00000021650	Ptcd2	97	70.620	Mus_musculus
ENSUMAG00000007666	PTCD2	97	74.124	MGP_PahariEiJ_G0015904	Ptcd2	97	74.124	Mus_pahari
ENSUMAG00000007666	PTCD2	97	71.429	MGP_SPRETEiJ_G0019711	Ptcd2	97	71.429	Mus_spretus
ENSUMAG00000007666	PTCD2	100	94.517	ENSMPUG00000014401	PTCD2	100	94.517	Mustela_putorius_furo
ENSUMAG00000007666	PTCD2	100	78.590	ENSMLUG00000007374	PTCD2	99	78.590	Myotis_lucifugus
ENSUMAG00000007666	PTCD2	100	72.846	ENSNGAG00000005027	Ptcd2	100	72.846	Nannospalax_galili
ENSUMAG00000007666	PTCD2	86	45.619	ENSNBRG00000000092	-	100	45.619	Neolamprologus_brichardi
ENSUMAG00000007666	PTCD2	95	45.355	ENSNBRG00000008174	ptcd2	95	45.355	Neolamprologus_brichardi
ENSUMAG00000007666	PTCD2	100	77.285	ENSNLEG00000004516	PTCD2	99	77.285	Nomascus_leucogenys
ENSUMAG00000007666	PTCD2	78	54.000	ENSMEUG00000014012	-	82	53.355	Notamacropus_eugenii
ENSUMAG00000007666	PTCD2	100	71.540	ENSOPRG00000007290	PTCD2	99	71.540	Ochotona_princeps
ENSUMAG00000007666	PTCD2	97	74.054	ENSODEG00000016417	PTCD2	97	74.054	Octodon_degus
ENSUMAG00000007666	PTCD2	80	46.078	ENSONIG00000011269	ptcd2	89	46.078	Oreochromis_niloticus
ENSUMAG00000007666	PTCD2	95	78.082	ENSOCUG00000007970	PTCD2	100	76.501	Oryctolagus_cuniculus
ENSUMAG00000007666	PTCD2	95	43.802	ENSORLG00000003851	ptcd2	92	43.802	Oryzias_latipes
ENSUMAG00000007666	PTCD2	95	43.251	ENSORLG00020009823	ptcd2	94	43.251	Oryzias_latipes_hni
ENSUMAG00000007666	PTCD2	90	44.509	ENSORLG00015016777	ptcd2	99	44.509	Oryzias_latipes_hsok
ENSUMAG00000007666	PTCD2	94	42.659	ENSOMEG00000012396	ptcd2	87	42.659	Oryzias_melastigma
ENSUMAG00000007666	PTCD2	100	74.674	ENSOGAG00000008390	PTCD2	99	74.674	Otolemur_garnettii
ENSUMAG00000007666	PTCD2	100	81.250	ENSOARG00000005087	PTCD2	99	81.250	Ovis_aries
ENSUMAG00000007666	PTCD2	100	77.807	ENSPPAG00000028480	PTCD2	99	77.807	Pan_paniscus
ENSUMAG00000007666	PTCD2	100	77.807	ENSPTRG00000016968	PTCD2	99	77.807	Pan_troglodytes
ENSUMAG00000007666	PTCD2	90	78.841	ENSPANG00000006611	PTCD2	89	78.841	Papio_anubis
ENSUMAG00000007666	PTCD2	92	47.740	ENSPKIG00000019896	ptcd2	92	47.740	Paramormyrops_kingsleyae
ENSUMAG00000007666	PTCD2	81	60.968	ENSPSIG00000014559	PTCD2	96	60.968	Pelodiscus_sinensis
ENSUMAG00000007666	PTCD2	97	71.850	ENSPEMG00000000884	Ptcd2	97	71.850	Peromyscus_maniculatus_bairdii
ENSUMAG00000007666	PTCD2	100	59.375	ENSPCIG00000029047	PTCD2	100	59.375	Phascolarctos_cinereus
ENSUMAG00000007666	PTCD2	85	44.954	ENSPLAG00000010456	ptcd2	91	44.699	Poecilia_latipinna
ENSUMAG00000007666	PTCD2	91	43.678	ENSPREG00000021797	ptcd2	88	43.678	Poecilia_reticulata
ENSUMAG00000007666	PTCD2	100	68.668	ENSPPYG00000015543	PTCD2	99	68.668	Pongo_abelii
ENSUMAG00000007666	PTCD2	81	65.696	ENSPCAG00000006806	PTCD2	98	65.696	Procavia_capensis
ENSUMAG00000007666	PTCD2	100	79.373	ENSPVAG00000010935	PTCD2	99	79.373	Pteropus_vampyrus
ENSUMAG00000007666	PTCD2	95	45.082	ENSPNYG00000003122	ptcd2	93	45.082	Pundamilia_nyererei
ENSUMAG00000007666	PTCD2	96	47.581	ENSPNAG00000021490	ptcd2	94	47.849	Pygocentrus_nattereri
ENSUMAG00000007666	PTCD2	100	72.846	ENSRNOG00000028403	Ptcd2	100	72.846	Rattus_norvegicus
ENSUMAG00000007666	PTCD2	100	72.585	ENSRBIG00000032929	PTCD2	99	72.585	Rhinopithecus_bieti
ENSUMAG00000007666	PTCD2	100	78.068	ENSRROG00000000080	PTCD2	100	78.068	Rhinopithecus_roxellana
ENSUMAG00000007666	PTCD2	100	77.807	ENSSBOG00000018911	PTCD2	100	77.807	Saimiri_boliviensis_boliviensis
ENSUMAG00000007666	PTCD2	100	58.594	ENSSHAG00000003833	PTCD2	99	58.594	Sarcophilus_harrisii
ENSUMAG00000007666	PTCD2	84	47.678	ENSSFOG00015015415	ptcd2	84	47.678	Scleropages_formosus
ENSUMAG00000007666	PTCD2	97	42.973	ENSSMAG00000010350	ptcd2	96	42.973	Scophthalmus_maximus
ENSUMAG00000007666	PTCD2	95	46.301	ENSSDUG00000008142	ptcd2	91	46.301	Seriola_dumerili
ENSUMAG00000007666	PTCD2	95	46.575	ENSSLDG00000015284	ptcd2	95	46.575	Seriola_lalandi_dorsalis
ENSUMAG00000007666	PTCD2	81	69.256	ENSSARG00000004983	PTCD2	99	69.256	Sorex_araneus
ENSUMAG00000007666	PTCD2	100	51.175	ENSSPUG00000000176	PTCD2	96	51.175	Sphenodon_punctatus
ENSUMAG00000007666	PTCD2	97	44.892	ENSSPAG00000008591	ptcd2	95	44.892	Stegastes_partitus
ENSUMAG00000007666	PTCD2	100	81.201	ENSSSCG00000016975	PTCD2	90	81.201	Sus_scrofa
ENSUMAG00000007666	PTCD2	90	50.581	ENSTGUG00000005705	PTCD2	99	50.581	Taeniopygia_guttata
ENSUMAG00000007666	PTCD2	100	75.979	ENSTBEG00000016559	PTCD2	99	75.979	Tupaia_belangeri
ENSUMAG00000007666	PTCD2	100	81.250	ENSTTRG00000011851	PTCD2	99	81.250	Tursiops_truncatus
ENSUMAG00000007666	PTCD2	100	99.739	ENSUAMG00000007583	PTCD2	90	99.739	Ursus_americanus
ENSUMAG00000007666	PTCD2	100	80.729	ENSVPAG00000009597	PTCD2	99	80.729	Vicugna_pacos
ENSUMAG00000007666	PTCD2	100	86.162	ENSVVUG00000007299	-	100	86.162	Vulpes_vulpes
ENSUMAG00000007666	PTCD2	92	52.557	ENSXETG00000031652	PTCD2	92	52.557	Xenopus_tropicalis
ENSUMAG00000007666	PTCD2	85	44.954	ENSXMAG00000005940	ptcd2	82	44.413	Xiphophorus_maculatus