EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000007842 (Gene tree)
Gene ID: 103663602
Gene Symbol: -
Alias: -
Full Name: survival motor neuron protein
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 37537 bases
Position: chrKK498597.1:5627280-5664816
Accession: 103663602
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000010425	SMN	PF06003.12	1e-107	1	1
ENSUMAP00000010430	SMN	PF06003.12	2.4e-104	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000012446	-	1509	-	ENSUMAP00000010430	392 (aa)	-	-
ENSUMAT00000012442	-	1557	XM_008691320	ENSUMAP00000010425	388 (aa)	XP_008689541	UPI0004DFF414

Gene Model

Click here to download ENSUMAG00000007842's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000007842's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000007842	-	72	89.324	ENSG00000172062	SMN1	95	89.324	Homo_sapiens
ENSUMAG00000007842	-	72	89.324	ENSG00000205571	SMN2	95	89.324	Homo_sapiens
ENSUMAG00000007842	-	69	51.220	ENSAPOG00000011324	smn1	94	53.623	Acanthochromis_polyacanthus
ENSUMAG00000007842	-	76	98.986	ENSAMEG00000003316	-	98	98.986	Ailuropoda_melanoleuca
ENSUMAG00000007842	-	66	52.453	ENSACIG00000019772	-	97	51.321	Amphilophus_citrinellus
ENSUMAG00000007842	-	69	54.513	ENSAOCG00000024444	smn1	94	53.986	Amphiprion_ocellaris
ENSUMAG00000007842	-	69	53.069	ENSAPEG00000016504	smn1	94	54.348	Amphiprion_percula
ENSUMAG00000007842	-	68	53.957	ENSATEG00000002182	smn1	83	54.448	Anabas_testudineus
ENSUMAG00000007842	-	51	59.596	ENSAPLG00000010912	-	97	58.586	Anas_platyrhynchos
ENSUMAG00000007842	-	70	57.554	ENSACAG00000010017	-	95	60.215	Anolis_carolinensis
ENSUMAG00000007842	-	74	85.034	ENSANAG00000032133	-	95	86.477	Aotus_nancymaae
ENSUMAG00000007842	-	69	53.791	ENSACLG00000007308	smn1	88	56.716	Astatotilapia_calliptera
ENSUMAG00000007842	-	72	88.298	ENSBTAG00000005743	SMN2	98	88.298	Bos_taurus
ENSUMAG00000007842	-	72	87.943	ENSCJAG00000016290	-	94	90.000	Callithrix_jacchus
ENSUMAG00000007842	-	74	94.810	ENSCAFG00000007812	SMN	97	94.662	Canis_familiaris
ENSUMAG00000007842	-	74	94.792	ENSCAFG00020019229	-	90	94.643	Canis_lupus_dingo
ENSUMAG00000007842	-	72	88.732	ENSCHIG00000015559	-	96	88.732	Capra_hircus
ENSUMAG00000007842	-	74	90.592	ENSTSYG00000012058	-	97	91.039	Carlito_syrichta
ENSUMAG00000007842	-	57	69.469	ENSCAPG00000011021	-	100	69.027	Cavia_aperea
ENSUMAG00000007842	-	74	83.219	ENSCPOG00000012328	-	97	82.927	Cavia_porcellus
ENSUMAG00000007842	-	74	82.935	ENSCPOG00000036973	-	96	83.333	Cavia_porcellus
ENSUMAG00000007842	-	72	87.857	ENSCCAG00000018127	-	94	90.000	Cebus_capucinus
ENSUMAG00000007842	-	72	89.324	ENSCATG00000037002	-	95	89.324	Cercocebus_atys
ENSUMAG00000007842	-	75	82.155	ENSCLAG00000000284	-	96	83.217	Chinchilla_lanigera
ENSUMAG00000007842	-	72	88.968	ENSCSAG00000015688	-	95	88.968	Chlorocebus_sabaeus
ENSUMAG00000007842	-	64	80.159	ENSCHOG00000007346	-	67	91.071	Choloepus_hoffmanni
ENSUMAG00000007842	-	75	62.838	ENSCPBG00000010968	-	99	63.941	Chrysemys_picta_bellii
ENSUMAG00000007842	-	72	89.964	ENSCANG00000038242	-	96	89.850	Colobus_angolensis_palliatus
ENSUMAG00000007842	-	71	81.851	ENSCANG00000033324	-	91	84.444	Colobus_angolensis_palliatus
ENSUMAG00000007842	-	74	85.172	ENSCGRG00001017959	-	97	85.461	Cricetulus_griseus_chok1gshd
ENSUMAG00000007842	-	74	66.782	ENSCGRG00001016998	-	97	67.616	Cricetulus_griseus_chok1gshd
ENSUMAG00000007842	-	74	85.172	ENSCGRG00000007698	Smn1	97	85.461	Cricetulus_griseus_crigri
ENSUMAG00000007842	-	69	46.154	ENSCSEG00000015227	smn1	54	58.861	Cynoglossus_semilaevis
ENSUMAG00000007842	-	69	53.285	ENSCVAG00000007498	smn1	95	52.878	Cyprinodon_variegatus
ENSUMAG00000007842	-	70	49.455	ENSDARG00000018494	smn1	96	49.091	Danio_rerio
ENSUMAG00000007842	-	62	90.041	ENSDNOG00000007283	-	100	90.041	Dasypus_novemcinctus
ENSUMAG00000007842	-	60	75.319	ENSDNOG00000045949	-	92	75.799	Dasypus_novemcinctus
ENSUMAG00000007842	-	72	79.359	ENSDORG00000007082	Smn1	96	79.359	Dipodomys_ordii
ENSUMAG00000007842	-	53	74.396	ENSETEG00000001406	-	89	72.283	Echinops_telfairi
ENSUMAG00000007842	-	72	79.078	ENSEASG00005018000	-	90	84.436	Equus_asinus_asinus
ENSUMAG00000007842	-	74	90.378	ENSECAG00000015215	-	97	90.780	Equus_caballus
ENSUMAG00000007842	-	64	82.400	ENSEEUG00000015777	-	100	82.400	Erinaceus_europaeus
ENSUMAG00000007842	-	69	55.556	ENSELUG00000018067	smn1	94	53.650	Esox_lucius
ENSUMAG00000007842	-	75	92.517	ENSFCAG00000028292	SMN	97	93.617	Felis_catus
ENSUMAG00000007842	-	67	63.498	ENSFALG00000012320	-	91	62.595	Ficedula_albicollis
ENSUMAG00000007842	-	74	82.155	ENSFDAG00000017683	-	96	83.217	Fukomys_damarensis
ENSUMAG00000007842	-	71	50.903	ENSGMOG00000017279	smn1	93	48.375	Gadus_morhua
ENSUMAG00000007842	-	69	62.222	ENSGALG00000002430	SMN	95	61.111	Gallus_gallus
ENSUMAG00000007842	-	69	53.430	ENSGAFG00000009501	smn1	59	60.256	Gambusia_affinis
ENSUMAG00000007842	-	69	51.852	ENSGACG00000010584	smn1	91	54.478	Gasterosteus_aculeatus
ENSUMAG00000007842	-	69	36.434	ENSGAGG00000013639	-	56	48.485	Gopherus_agassizii
ENSUMAG00000007842	-	73	62.414	ENSGAGG00000011374	-	97	63.214	Gopherus_agassizii
ENSUMAG00000007842	-	71	74.638	ENSGGOG00000003872	-	74	88.587	Gorilla_gorilla
ENSUMAG00000007842	-	69	52.399	ENSHBUG00000013987	smn1	94	56.000	Haplochromis_burtoni
ENSUMAG00000007842	-	74	80.822	ENSHGLG00000001905	-	98	82.437	Heterocephalus_glaber_female
ENSUMAG00000007842	-	74	82.492	ENSHGLG00000001018	-	96	83.566	Heterocephalus_glaber_female
ENSUMAG00000007842	-	71	80.357	ENSHGLG00100018676	-	97	82.022	Heterocephalus_glaber_male
ENSUMAG00000007842	-	74	82.492	ENSHGLG00100011252	-	96	83.566	Heterocephalus_glaber_male
ENSUMAG00000007842	-	67	52.222	ENSHCOG00000017136	smn1	87	51.504	Hippocampus_comes
ENSUMAG00000007842	-	77	48.860	ENSIPUG00000012580	smn1	86	50.909	Ictalurus_punctatus
ENSUMAG00000007842	-	68	92.045	ENSSTOG00000012288	-	96	92.105	Ictidomys_tridecemlineatus
ENSUMAG00000007842	-	69	53.623	ENSKMAG00000007239	smn1	96	50.385	Kryptolebias_marmoratus
ENSUMAG00000007842	-	69	52.688	ENSLBEG00000022550	smn1	94	54.745	Labrus_bergylta
ENSUMAG00000007842	-	69	36.620	ENSLACG00000009808	-	90	38.628	Latimeria_chalumnae
ENSUMAG00000007842	-	69	51.471	ENSLOCG00000011339	smn1	94	53.650	Lepisosteus_oculatus
ENSUMAG00000007842	-	75	88.814	ENSLAFG00000003425	-	97	88.889	Loxodonta_africana
ENSUMAG00000007842	-	72	84.698	ENSMFAG00000008812	-	95	84.698	Macaca_fascicularis
ENSUMAG00000007842	-	72	89.680	ENSMFAG00000031523	SMN1	94	91.250	Macaca_fascicularis
ENSUMAG00000007842	-	72	89.680	ENSMMUG00000020214	SMN1	94	91.250	Macaca_mulatta
ENSUMAG00000007842	-	72	83.986	ENSMMUG00000030594	-	95	83.986	Macaca_mulatta
ENSUMAG00000007842	-	56	76.923	ENSMNEG00000036423	-	86	76.923	Macaca_nemestrina
ENSUMAG00000007842	-	72	89.324	ENSMNEG00000035094	-	94	91.250	Macaca_nemestrina
ENSUMAG00000007842	-	72	89.680	ENSMLEG00000041902	-	95	89.680	Mandrillus_leucophaeus
ENSUMAG00000007842	-	69	53.846	ENSMAMG00000011034	smn1	94	52.536	Mastacembelus_armatus
ENSUMAG00000007842	-	69	52.030	ENSMZEG00005013634	smn1	94	55.636	Maylandia_zebra
ENSUMAG00000007842	-	51	57.868	ENSMGAG00000008889	-	95	56.345	Meleagris_gallopavo
ENSUMAG00000007842	-	74	83.103	ENSMAUG00000010262	Smn1	97	83.333	Mesocricetus_auratus
ENSUMAG00000007842	-	75	75.510	ENSMICG00000034708	-	94	90.000	Microcebus_murinus
ENSUMAG00000007842	-	74	82.759	ENSMOCG00000017833	Smn1	97	82.979	Microtus_ochrogaster
ENSUMAG00000007842	-	69	46.909	ENSMMOG00000005504	smn1	96	50.000	Mola_mola
ENSUMAG00000007842	-	76	70.169	ENSMODG00000001436	-	96	71.831	Monodelphis_domestica
ENSUMAG00000007842	-	69	52.747	ENSMALG00000008025	smn1	94	53.261	Monopterus_albus
ENSUMAG00000007842	-	74	83.162	MGP_CAROLIEiJ_G0018836	Smn1	97	84.342	Mus_caroli
ENSUMAG00000007842	-	74	83.162	ENSMUSG00000021645	Smn1	97	84.342	Mus_musculus
ENSUMAG00000007842	-	74	81.661	MGP_PahariEiJ_G0015911	Smn1	97	82.437	Mus_pahari
ENSUMAG00000007842	-	74	82.818	MGP_SPRETEiJ_G0019718	Smn1	97	83.986	Mus_spretus
ENSUMAG00000007842	-	72	98.582	ENSMPUG00000014470	-	100	98.582	Mustela_putorius_furo
ENSUMAG00000007842	-	77	88.925	ENSMLUG00000010603	-	93	90.311	Myotis_lucifugus
ENSUMAG00000007842	-	74	84.828	ENSNGAG00000019833	Smn1	97	85.461	Nannospalax_galili
ENSUMAG00000007842	-	69	54.909	ENSNBRG00000023000	smn1	94	56.364	Neolamprologus_brichardi
ENSUMAG00000007842	-	74	88.356	ENSNLEG00000004454	-	95	89.324	Nomascus_leucogenys
ENSUMAG00000007842	-	58	65.044	ENSMEUG00000011393	-	99	66.520	Notamacropus_eugenii
ENSUMAG00000007842	-	64	81.028	ENSOPRG00000002015	-	100	82.213	Ochotona_princeps
ENSUMAG00000007842	-	71	84.727	ENSODEG00000015976	-	97	83.696	Octodon_degus
ENSUMAG00000007842	-	69	56.679	ENSONIG00000011799	smn1	95	55.957	Oreochromis_niloticus
ENSUMAG00000007842	-	74	64.583	ENSOANG00000001626	-	96	67.636	Ornithorhynchus_anatinus
ENSUMAG00000007842	-	75	87.329	ENSOCUG00000017097	-	96	87.544	Oryctolagus_cuniculus
ENSUMAG00000007842	-	74	78.983	ENSOCUG00000025183	-	97	79.720	Oryctolagus_cuniculus
ENSUMAG00000007842	-	74	82.313	ENSOCUG00000026649	-	96	85.263	Oryctolagus_cuniculus
ENSUMAG00000007842	-	69	52.985	ENSORLG00020007936	smn1	59	59.615	Oryzias_latipes_hni
ENSUMAG00000007842	-	69	78.309	ENSOGAG00000031414	-	94	78.309	Otolemur_garnettii
ENSUMAG00000007842	-	71	86.909	ENSOARG00000005425	-	100	86.909	Ovis_aries
ENSUMAG00000007842	-	72	88.968	ENSPPAG00000036640	-	95	88.968	Pan_paniscus
ENSUMAG00000007842	-	74	93.793	ENSPPRG00000005575	-	97	93.972	Panthera_pardus
ENSUMAG00000007842	-	74	93.471	ENSPTIG00000007745	-	97	93.640	Panthera_tigris_altaica
ENSUMAG00000007842	-	72	88.380	ENSPTRG00000016955	-	95	88.380	Pan_troglodytes
ENSUMAG00000007842	-	71	84.532	ENSPANG00000000253	-	94	84.892	Papio_anubis
ENSUMAG00000007842	-	74	88.699	ENSPANG00000013601	-	94	91.250	Papio_anubis
ENSUMAG00000007842	-	69	51.971	ENSPKIG00000011096	smn1	94	53.933	Paramormyrops_kingsleyae
ENSUMAG00000007842	-	70	61.131	ENSPSIG00000014787	-	90	59.011	Pelodiscus_sinensis
ENSUMAG00000007842	-	69	47.719	ENSPMGG00000012285	smn1	58	58.750	Periophthalmus_magnuspinnatus
ENSUMAG00000007842	-	72	40.972	ENSPMAG00000005004	smn1	91	41.852	Petromyzon_marinus
ENSUMAG00000007842	-	73	70.526	ENSPCIG00000025764	-	98	71.378	Phascolarctos_cinereus
ENSUMAG00000007842	-	69	54.212	ENSPFOG00000007786	smn1	94	53.114	Poecilia_formosa
ENSUMAG00000007842	-	69	54.579	ENSPLAG00000012071	smn1	94	53.480	Poecilia_latipinna
ENSUMAG00000007842	-	69	54.212	ENSPMEG00000017085	smn1	94	53.114	Poecilia_mexicana
ENSUMAG00000007842	-	69	55.109	ENSPREG00000005824	smn1	94	53.704	Poecilia_reticulata
ENSUMAG00000007842	-	64	56.225	ENSPPYG00000019189	-	99	54.618	Pongo_abelii
ENSUMAG00000007842	-	68	87.640	ENSPPYG00000015533	-	96	87.640	Pongo_abelii
ENSUMAG00000007842	-	68	85.185	ENSPCAG00000004187	-	100	84.444	Procavia_capensis
ENSUMAG00000007842	-	67	69.811	ENSPCOG00000022307	-	90	83.902	Propithecus_coquereli
ENSUMAG00000007842	-	72	95.357	ENSPVAG00000005977	-	96	95.374	Pteropus_vampyrus
ENSUMAG00000007842	-	69	54.909	ENSPNYG00000014148	smn1	94	56.364	Pundamilia_nyererei
ENSUMAG00000007842	-	74	81.100	ENSRNOG00000018067	Smn1	97	81.851	Rattus_norvegicus
ENSUMAG00000007842	-	71	74.194	ENSRBIG00000036775	-	91	76.667	Rhinopithecus_bieti
ENSUMAG00000007842	-	72	89.324	ENSRBIG00000037052	-	95	89.324	Rhinopithecus_bieti
ENSUMAG00000007842	-	74	72.696	ENSRROG00000031088	-	95	74.823	Rhinopithecus_roxellana
ENSUMAG00000007842	-	72	89.324	ENSRROG00000039399	-	95	89.324	Rhinopithecus_roxellana
ENSUMAG00000007842	-	72	87.455	ENSSBOG00000011665	-	94	88.750	Saimiri_boliviensis_boliviensis
ENSUMAG00000007842	-	62	80.478	ENSSBOG00000020112	-	87	80.876	Saimiri_boliviensis_boliviensis
ENSUMAG00000007842	-	75	70.648	ENSSHAG00000001499	-	97	71.747	Sarcophilus_harrisii
ENSUMAG00000007842	-	69	51.636	ENSSFOG00015015507	smn1	94	50.909	Scleropages_formosus
ENSUMAG00000007842	-	69	51.471	ENSSMAG00000007922	smn1	94	51.449	Scophthalmus_maximus
ENSUMAG00000007842	-	69	52.878	ENSSDUG00000018533	smn1	94	54.152	Seriola_dumerili
ENSUMAG00000007842	-	69	52.878	ENSSLDG00000021135	smn1	94	54.152	Seriola_lalandi_dorsalis
ENSUMAG00000007842	-	73	63.860	ENSSPUG00000000373	-	93	66.171	Sphenodon_punctatus
ENSUMAG00000007842	-	69	51.625	ENSSPAG00000004345	smn1	94	53.623	Stegastes_partitus
ENSUMAG00000007842	-	72	92.908	ENSSSCG00000016970	-	96	92.908	Sus_scrofa
ENSUMAG00000007842	-	72	69.039	ENSSSCG00000029127	-	94	69.039	Sus_scrofa
ENSUMAG00000007842	-	55	61.502	ENSSSCG00000033865	-	95	60.648	Sus_scrofa
ENSUMAG00000007842	-	70	60.932	ENSTGUG00000001548	-	96	61.278	Taeniopygia_guttata
ENSUMAG00000007842	-	69	47.584	ENSTRUG00000000736	smn	63	53.714	Takifugu_rubripes
ENSUMAG00000007842	-	70	49.110	ENSTNIG00000009892	smn1	95	47.670	Tetraodon_nigroviridis
ENSUMAG00000007842	-	72	87.900	ENSTTRG00000005080	-	96	88.968	Tursiops_truncatus
ENSUMAG00000007842	-	70	98.519	ENSUAMG00000024947	-	99	98.519	Ursus_americanus
ENSUMAG00000007842	-	69	79.323	ENSVPAG00000009887	-	96	79.323	Vicugna_pacos
ENSUMAG00000007842	-	74	94.810	ENSVVUG00000006934	-	97	94.662	Vulpes_vulpes
ENSUMAG00000007842	-	74	53.608	ENSXETG00000018189	smn2	92	55.036	Xenopus_tropicalis
ENSUMAG00000007842	-	68	36.396	ENSXETG00000004912	-	80	55.556	Xenopus_tropicalis
ENSUMAG00000007842	-	70	53.763	ENSXMAG00000001521	smn1	95	53.047	Xiphophorus_maculatus